RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 YBEYP58557 167 aaPredicted RBP17.7■□□□□ 0.42
LITAF-212ENST00000573332 DPYSQ14117 519 aa17.7■□□□□ 0.42
LITAF-212ENST00000573332 PDK2Q15119 407 aa17.7■□□□□ 0.42
LITAF-212ENST00000573332 PPP6R3Q5H9R7 873 aaPredicted RBP17.7■□□□□ 0.42
LITAF-212ENST00000573332 TMEM92Q6UXU6 159 aa17.7■□□□□ 0.42
LITAF-212ENST00000573332 PRSS33Q8NF86 280 aa17.7■□□□□ 0.42
LITAF-212ENST00000573332 CYB5D2Q8WUJ1 264 aa17.7■□□□□ 0.42
LITAF-212ENST00000573332 TSC1Q92574 1164 aa17.7■□□□□ 0.42
LITAF-212ENST00000573332 PSMB7Q99436 277 aa17.7■□□□□ 0.42
LITAF-212ENST00000573332 C2orf49Q9BVC5 232 aaPredicted RBP17.7■□□□□ 0.42
LITAF-212ENST00000573332 ACE2Q9BYF1 805 aaPredicted RBP17.7■□□□□ 0.42
LITAF-212ENST00000573332 MUC3BQ9H195 1237 aa17.7■□□□□ 0.42
LITAF-212ENST00000573332 IRF2BPLQ9H1B7 796 aa17.7■□□□□ 0.42
LITAF-212ENST00000573332 CACNA2D2Q9NY47 1150 aa17.7■□□□□ 0.42
LITAF-212ENST00000573332 DNAI1Q9UI46 699 aa17.7■□□□□ 0.42
LITAF-212ENST00000573332 ERVW-1Q9UQF0 538 aa17.7■□□□□ 0.42
LITAF-212ENST00000573332 A0A1W2PQF6 199 aa17.69■□□□□ 0.42
LITAF-212ENST00000573332 WASH3PC4AMC7 463 aa17.69■□□□□ 0.42
LITAF-212ENST00000573332 RAMP2O60895 175 aa17.69■□□□□ 0.42
LITAF-212ENST00000573332 ERCC2P18074 760 aa17.69■□□□□ 0.42
LITAF-212ENST00000573332 COMTP21964 271 aa17.69■□□□□ 0.42
LITAF-212ENST00000573332 IL4RP24394 825 aa17.69■□□□□ 0.42
LITAF-212ENST00000573332 ST8SIA6P61647 398 aa17.69■□□□□ 0.42
LITAF-212ENST00000573332 CSTF1Q05048 431 aaKnown RBP17.69■□□□□ 0.42
LITAF-212ENST00000573332 TCF15Q12870 199 aa17.69■□□□□ 0.42
LITAF-212ENST00000573332 ATP13A4Q4VNC1 1196 aa17.69■□□□□ 0.42
LITAF-212ENST00000573332 SERPINA13PQ6UXR4 307 aa17.69■□□□□ 0.42
LITAF-212ENST00000573332 ZNF662Q6ZS27 426 aa17.69■□□□□ 0.42
LITAF-212ENST00000573332 VSIG1Q86XK7 387 aa17.69■□□□□ 0.42
LITAF-212ENST00000573332 MAP7D3Q8IWC1 876 aa17.69■□□□□ 0.42
LITAF-212ENST00000573332 RHOT1Q8IXI2 618 aa17.69■□□□□ 0.42
LITAF-212ENST00000573332 ARHGEF2Q92974 986 aaKnown RBP17.69■□□□□ 0.42
LITAF-212ENST00000573332 CSPG4P5Q96PW8 444 aa17.69■□□□□ 0.42
LITAF-212ENST00000573332 NOL6Q9H6R4 1146 aaKnown RBP17.69■□□□□ 0.42
LITAF-212ENST00000573332 POLMQ9NP87 494 aaPredicted RBP17.69■□□□□ 0.42
LITAF-212ENST00000573332 POLR3BQ9NW08 1133 aaPredicted RBP17.69■□□□□ 0.42
LITAF-212ENST00000573332 EBF1Q9UH73 591 aa17.69■□□□□ 0.42
LITAF-212ENST00000573332 HCN4Q9Y3Q4 1203 aa17.69■□□□□ 0.42
LITAF-212ENST00000573332 ARIH1Q9Y4X5 557 aaPredicted RBP17.69■□□□□ 0.42
LITAF-212ENST00000573332 ZNF487B1APH4 448 aa17.68■□□□□ 0.42
LITAF-212ENST00000573332 DAPK3O43293 454 aa17.68■□□□□ 0.42
LITAF-212ENST00000573332 BUB1O43683 1085 aa17.68■□□□□ 0.42
LITAF-212ENST00000573332 ZMPSTE24O75844 475 aa17.68■□□□□ 0.42
LITAF-212ENST00000573332 APBB3O95704 486 aa17.68■□□□□ 0.42
LITAF-212ENST00000573332 SP9P0CG40 484 aa17.68■□□□□ 0.42
LITAF-212ENST00000573332 C7P10643 843 aa17.68■□□□□ 0.42
LITAF-212ENST00000573332 WASP42768 502 aa17.68■□□□□ 0.42
LITAF-212ENST00000573332 CTSOP43234 321 aaPredicted RBP17.68■□□□□ 0.42
LITAF-212ENST00000573332 NDST2P52849 883 aa17.68■□□□□ 0.42
LITAF-212ENST00000573332 PTPN5P54829 565 aa17.68■□□□□ 0.42
LITAF-212ENST00000573332 NRLP54845 237 aa17.68■□□□□ 0.42
LITAF-212ENST00000573332 CDH6P55285 790 aa17.68■□□□□ 0.42
LITAF-212ENST00000573332 SLC20A2Q08357 652 aa17.68■□□□□ 0.42
LITAF-212ENST00000573332 POLD3Q15054 466 aaPredicted RBP17.68■□□□□ 0.42
LITAF-212ENST00000573332 IFI16Q16666 785 aaKnown RBP17.68■□□□□ 0.42
LITAF-212ENST00000573332 PARP15Q460N3 678 aa17.68■□□□□ 0.42
LITAF-212ENST00000573332 FNDC3BQ53EP0 1204 aaKnown RBP17.68■□□□□ 0.42
LITAF-212ENST00000573332 RASSF3Q86WH2 238 aa17.68■□□□□ 0.42
LITAF-212ENST00000573332 LZTR1Q8N653 840 aa17.68■□□□□ 0.42
LITAF-212ENST00000573332 OR7D4Q8NG98 312 aa17.68■□□□□ 0.42
LITAF-212ENST00000573332 ZNF670Q9BS34 389 aa17.68■□□□□ 0.42
LITAF-212ENST00000573332 KLC2Q9H0B6 622 aa17.68■□□□□ 0.42
LITAF-212ENST00000573332 SUN2Q9UH99 717 aa17.68■□□□□ 0.42
LITAF-212ENST00000573332 HS3ST2Q9Y278 367 aa17.68■□□□□ 0.42
LITAF-212ENST00000573332 DCLK1O15075 740 aa17.67■□□□□ 0.42
LITAF-212ENST00000573332 SPOPO43791 374 aa17.67■□□□□ 0.42
LITAF-212ENST00000573332 ATP9BO43861 1147 aa17.67■□□□□ 0.42
LITAF-212ENST00000573332 CCDC175P0C221 793 aa17.67■□□□□ 0.42
LITAF-212ENST00000573332 COL9A1P20849 921 aa17.67■□□□□ 0.42
LITAF-212ENST00000573332 PRKCHP24723 683 aa17.67■□□□□ 0.42
LITAF-212ENST00000573332 NNMTP40261 264 aa17.67■□□□□ 0.42
LITAF-212ENST00000573332 CAMK2GQ13555 558 aaPredicted RBP17.67■□□□□ 0.42
LITAF-212ENST00000573332 DPYSL3Q14195 570 aa17.67■□□□□ 0.42
LITAF-212ENST00000573332 KRT81Q14533 505 aa17.67■□□□□ 0.42
LITAF-212ENST00000573332 STARD3Q14849 445 aa17.67■□□□□ 0.42
LITAF-212ENST00000573332 HNRNPA1L2Q32P51 320 aaKnown RBP17.67■□□□□ 0.42
LITAF-212ENST00000573332 AFMIDQ63HM1 303 aa17.67■□□□□ 0.42
LITAF-212ENST00000573332 TSSK4Q6SA08 328 aa17.67■□□□□ 0.42
LITAF-212ENST00000573332 DAAM2Q86T65 1068 aa17.67■□□□□ 0.42
LITAF-212ENST00000573332 RNF10Q8N5U6 811 aaKnown RBP17.67■□□□□ 0.42
LITAF-212ENST00000573332 KCTD6Q8NC69 237 aa17.67■□□□□ 0.42
LITAF-212ENST00000573332 TSTD1Q8NFU3 115 aa17.67■□□□□ 0.42
LITAF-212ENST00000573332 FAF2Q96CS3 445 aa17.67■□□□□ 0.42
LITAF-212ENST00000573332 TSGA10Q9BZW7 698 aa17.67■□□□□ 0.42
LITAF-212ENST00000573332 LRRC19Q9H756 370 aa17.67■□□□□ 0.42
LITAF-212ENST00000573332 ATP13A1Q9HD20 1204 aa17.67■□□□□ 0.42
LITAF-212ENST00000573332 DDX56Q9NY93 547 aaKnown RBP17.67■□□□□ 0.42
LITAF-212ENST00000573332 VPS51Q9UID3 782 aa17.67■□□□□ 0.42
LITAF-212ENST00000573332 SLCO3A1Q9UIG8 710 aa17.67■□□□□ 0.42
LITAF-212ENST00000573332 SLC25A13Q9UJS0 675 aa17.67■□□□□ 0.42
LITAF-212ENST00000573332 DOCK4Q8N1I0 1966 aa17.67■□□□□ 0.42
LITAF-212ENST00000573332 A0A0U1RQJ8 604 aa17.66■□□□□ 0.42
LITAF-212ENST00000573332 TARSL2A2RTX5 802 aaKnown RBP17.66■□□□□ 0.42
LITAF-212ENST00000573332 PSTPIP1O43586 416 aa17.66■□□□□ 0.42
LITAF-212ENST00000573332 KRT86O43790 486 aa17.66■□□□□ 0.42
LITAF-212ENST00000573332 SNAP91O60641 907 aa17.66■□□□□ 0.42
LITAF-212ENST00000573332 ALDH1A2O94788 518 aa17.66■□□□□ 0.42
LITAF-212ENST00000573332 EPHX1P07099 455 aa17.66■□□□□ 0.42
LITAF-212ENST00000573332 CD48P09326 243 aa17.66■□□□□ 0.42
LITAF-212ENST00000573332 KDELR1P24390 212 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms