RNA–Protein interactions for RNA: ENST00000573212.5

NPLOC4-211, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-211ENST00000573212 GOLGA4Q13439 2230 aaKnown RBP8.41□□□□□ -1.06
NPLOC4-211ENST00000573212 COL5A1P20908 1838 aaPredicted RBP8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 A0A1W2PP55 124 aa8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 CAPN8A6NHC0 703 aa8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 LRRC72A6NJI9 287 aa8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 CAPN9O14815 690 aa8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 MID1O15344 667 aa8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 LATO43561 262 aa8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 CALUO43852 315 aaPredicted RBP8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 ACSL4O60488 711 aa8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 ASLP04424 464 aa8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 TRIM49P0CI25 452 aa8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 TRIM49CP0CI26 452 aa8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 GOT1P17174 413 aa8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 CKMT2P17540 419 aa8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 ABCB4P21439 1286 aa8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 ACP1P24666 158 aa8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 SLC6A4P31645 630 aa8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 GTF2H1P32780 548 aa8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 PSMC2P35998 433 aaKnown RBP8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 PTGIRP43119 386 aa8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 DAOAP59103 153 aa8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 INSM1Q01101 510 aaPredicted RBP8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 TLE3Q04726 772 aa8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 NUMA1Q14980 2115 aa8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 CST6Q15828 149 aa8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 KRT39Q6A163 491 aa8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 NADSYN1Q6IA69 706 aa8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 MSANTD2Q6P1R3 559 aa8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 RFWD3Q6PCD5 774 aa8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 ERICH1Q86X53 443 aa8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 SPATS2Q86XZ4 545 aaKnown RBP8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 TREML1Q86YW5 311 aa8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 AADATQ8N5Z0 425 aa8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 ZNF557Q8N988 423 aaPredicted RBP8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 MYEOVQ96EZ4 313 aa8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 MRGPRX2Q96LB1 330 aa8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 UPF2Q9HAU5 1272 aaKnown RBP8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 GDF3Q9NR23 364 aa8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 RAB20Q9NX57 234 aa8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 FAM13BQ9NYF5 915 aa8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 RCOR1Q9UKL0 485 aa8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 TSPAN16Q9UKR8 245 aa8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 TPX2Q9ULW0 747 aaKnown RBP8.4□□□□□ -1.06
NPLOC4-211ENST00000573212 CFAP46Q8IYW2 2715 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 ITIH6Q6UXX5 1313 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 FAM47DPA6NHR8 397 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 TTC34A8MYJ7 566 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 J3QKU1 62 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 IRAK2O43187 625 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 BRINP1O60477 761 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 TBL1XO60907 577 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 RNASEH1O60930 286 aaKnown RBP8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 SRPRAP08240 638 aaKnown RBP8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 GLDCP23378 1020 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 NR2F2P24468 414 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 ACTN2P35609 894 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 CSKP41240 450 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 SLC8A3P57103 927 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 ST8SIA6P61647 398 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 E2F1Q01094 437 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 ADAM9Q13443 819 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 TBC1D25Q3MII6 688 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 FSCBQ5H9T9 825 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 IQCHQ86VS3 1027 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 MMAAQ8IVH4 418 aaKnown RBP8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 UNC45BQ8IWX7 931 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 DHX40Q8IX18 779 aaKnown RBP8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 SPACA3Q8IXA5 215 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 FAM186BQ8IYM0 893 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 CEP57L1Q8IYX8 460 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 SLC25A45Q8N413 288 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 OXR1Q8N573 874 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 UBR7Q8N806 425 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 MFSD2AQ8NA29 543 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 CCDC150Q8NCX0 1101 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 FBXL13Q8NEE6 735 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 RNF139Q8WU17 664 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 SLC35F5Q8WV83 523 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 SNRNP27Q8WVK2 155 aaKnown RBP8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 PTPRN2Q92932 1015 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 SLC39A13Q96H72 371 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 HIC2Q96JB3 615 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 LRRC4Q9HBW1 653 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 CNGB3Q9NQW8 809 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 AASDHPPTQ9NRN7 309 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 EXOC1Q9NV70 894 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 CUEDC1Q9NWM3 386 aaPredicted RBP8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 SLCO3A1Q9UIG8 710 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 CLCA2Q9UQC9 943 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 ERVW-1Q9UQF0 538 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 COQ4Q9Y3A0 265 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 BPTFQ12830 3046 aa8.39□□□□□ -1.07
NPLOC4-211ENST00000573212 MUC22E2RYF6 1773 aaPredicted RBP8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 TRIM38O00635 465 aa8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 MSI1O43347 362 aaKnown RBP8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 RNASEH2AO75792 299 aaKnown RBP8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 RHOBTB3O94955 611 aa8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 MT-CO3P00414 261 aa8.38□□□□□ -1.07
NPLOC4-211ENST00000573212 RPLP1P05386 114 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms