RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 TOP3BO95985 862 aaKnown RBP17.8■□□□□ 0.44
SMG6-212ENST00000573153 DNTTP04053 509 aa17.8■□□□□ 0.44
SMG6-212ENST00000573153 CEACAM1P13688 526 aa17.8■□□□□ 0.44
SMG6-212ENST00000573153 CDH4P55283 916 aa17.8■□□□□ 0.44
SMG6-212ENST00000573153 DEUP1Q05D60 604 aa17.8■□□□□ 0.44
SMG6-212ENST00000573153 SYCP2LQ5T4T6 812 aa17.8■□□□□ 0.44
SMG6-212ENST00000573153 RNF34Q969K3 372 aa17.8■□□□□ 0.44
SMG6-212ENST00000573153 VOPP1Q96AW1 172 aa17.8■□□□□ 0.44
SMG6-212ENST00000573153 C1orf74Q96LT6 269 aa17.8■□□□□ 0.44
SMG6-212ENST00000573153 GTPBP2Q9BX10 602 aaKnown RBP17.8■□□□□ 0.44
SMG6-212ENST00000573153 MAGEB5Q9BZ81 275 aa17.8■□□□□ 0.44
SMG6-212ENST00000573153 BTBD1Q9H0C5 482 aa17.8■□□□□ 0.44
SMG6-212ENST00000573153 WDCPQ9H6R7 721 aa17.8■□□□□ 0.44
SMG6-212ENST00000573153 SARDHQ9UL12 918 aa17.8■□□□□ 0.44
SMG6-212ENST00000573153 MYO6Q9UM54 1294 aa17.8■□□□□ 0.44
SMG6-212ENST00000573153 PAXBP1Q9Y5B6 917 aa17.8■□□□□ 0.44
SMG6-212ENST00000573153 FRYQ5TBA9 3013 aa17.8■□□□□ 0.44
SMG6-212ENST00000573153 KMT2BQ9UMN6 2715 aaPredicted RBP17.8■□□□□ 0.44
SMG6-212ENST00000573153 PCNX2A6NKB5 2137 aa17.8■□□□□ 0.44
SMG6-212ENST00000573153 CHD8Q9HCK8 2581 aa17.8■□□□□ 0.44
SMG6-212ENST00000573153 CHD5Q8TDI0 1954 aa17.79■□□□□ 0.44
SMG6-212ENST00000573153 A0A0D9SEW6 157 aa17.79■□□□□ 0.44
SMG6-212ENST00000573153 A0A1W2PP55 124 aa17.79■□□□□ 0.44
SMG6-212ENST00000573153 C2CD4BA6NLJ0 364 aa17.79■□□□□ 0.44
SMG6-212ENST00000573153 TEX33O43247 280 aa17.79■□□□□ 0.44
SMG6-212ENST00000573153 CLDN11O75508 207 aa17.79■□□□□ 0.44
SMG6-212ENST00000573153 GALCP54803 685 aa17.79■□□□□ 0.44
SMG6-212ENST00000573153 OXCT1P55809 520 aa17.79■□□□□ 0.44
SMG6-212ENST00000573153 ST8SIA6P61647 398 aa17.79■□□□□ 0.44
SMG6-212ENST00000573153 ZNF252P-AS1Q0IIN9 211 aa17.79■□□□□ 0.44
SMG6-212ENST00000573153 CCDC14Q49A88 953 aa17.79■□□□□ 0.44
SMG6-212ENST00000573153 KCNT1Q5JUK3 1230 aa17.79■□□□□ 0.44
SMG6-212ENST00000573153 LAYNQ6UX15 382 aa17.79■□□□□ 0.44
SMG6-212ENST00000573153 FAM131BQ86XD5 332 aa17.79■□□□□ 0.44
SMG6-212ENST00000573153 MMAAQ8IVH4 418 aaKnown RBP17.79■□□□□ 0.44
SMG6-212ENST00000573153 BAP1Q92560 729 aa17.79■□□□□ 0.44
SMG6-212ENST00000573153 C11orf70Q9BRQ4 267 aa17.79■□□□□ 0.44
SMG6-212ENST00000573153 SIK2Q9H0K1 926 aa17.79■□□□□ 0.44
SMG6-212ENST00000573153 NEUROG2Q9H2A3 272 aa17.79■□□□□ 0.44
SMG6-212ENST00000573153 SGK2Q9HBY8 427 aa17.79■□□□□ 0.44
SMG6-212ENST00000573153 RTN4Q9NQC3 1192 aaKnown RBP17.79■□□□□ 0.44
SMG6-212ENST00000573153 MPP6Q9NZW5 540 aa17.79■□□□□ 0.44
SMG6-212ENST00000573153 SCML1Q9UN30 329 aa17.79■□□□□ 0.44
SMG6-212ENST00000573153 HS3ST2Q9Y278 367 aa17.79■□□□□ 0.44
SMG6-212ENST00000573153 TMEM131Q92545 1883 aa17.78■□□□□ 0.44
SMG6-212ENST00000573153 E9PAM4 449 aa17.78■□□□□ 0.44
SMG6-212ENST00000573153 BCAT2O15382 392 aaPredicted RBP17.78■□□□□ 0.44
SMG6-212ENST00000573153 SNAP91O60641 907 aa17.78■□□□□ 0.44
SMG6-212ENST00000573153 ZMPSTE24O75844 475 aa17.78■□□□□ 0.44
SMG6-212ENST00000573153 MOCS3O95396 460 aa17.78■□□□□ 0.44
SMG6-212ENST00000573153 MT-CO1P00395 513 aa17.78■□□□□ 0.44
SMG6-212ENST00000573153 KCNA4P22459 653 aa17.78■□□□□ 0.44
SMG6-212ENST00000573153 SLC8A1P32418 973 aa17.78■□□□□ 0.44
SMG6-212ENST00000573153 RDXP35241 583 aaKnown RBP17.78■□□□□ 0.44
SMG6-212ENST00000573153 ZNF165P49910 485 aa17.78■□□□□ 0.44
SMG6-212ENST00000573153 ELAVL3Q14576 367 aaKnown RBP17.78■□□□□ 0.44
SMG6-212ENST00000573153 IQCB1Q15051 598 aa17.78■□□□□ 0.44
SMG6-212ENST00000573153 CLEC16AQ2KHT3 1053 aa17.78■□□□□ 0.44
SMG6-212ENST00000573153 C15orf59Q2T9L4 293 aaPredicted RBP17.78■□□□□ 0.44
SMG6-212ENST00000573153 E4F1Q66K89 784 aaPredicted RBP17.78■□□□□ 0.44
SMG6-212ENST00000573153 DBX2Q6ZNG2 339 aa17.78■□□□□ 0.44
SMG6-212ENST00000573153 SND1Q7KZF4 910 aaKnown RBP eCLIP17.78■□□□□ 0.44
SMG6-212ENST00000573153 MON1BQ7L1V2 547 aa17.78■□□□□ 0.44
SMG6-212ENST00000573153 PHLDB2Q86SQ0 1253 aa17.78■□□□□ 0.44
SMG6-212ENST00000573153 PHF13Q86YI8 300 aaPredicted RBP17.78■□□□□ 0.44
SMG6-212ENST00000573153 CENPIQ92674 756 aaPredicted RBP17.78■□□□□ 0.44
SMG6-212ENST00000573153 TM9SF3Q9HD45 589 aa17.78■□□□□ 0.44
SMG6-212ENST00000573153 FBXL12Q9NXK8 326 aa17.78■□□□□ 0.44
SMG6-212ENST00000573153 FNDC3AQ9Y2H6 1198 aaKnown RBP17.78■□□□□ 0.44
SMG6-212ENST00000573153 EPG5Q9HCE0 2579 aa17.77■□□□□ 0.44
SMG6-212ENST00000573153 K7ERQ8 282 aa17.77■□□□□ 0.44
SMG6-212ENST00000573153 WNT9AO14904 365 aa17.77■□□□□ 0.44
SMG6-212ENST00000573153 CBFA2T3O75081 653 aa17.77■□□□□ 0.44
SMG6-212ENST00000573153 ZNF821O75541 412 aaPredicted RBP17.77■□□□□ 0.44
SMG6-212ENST00000573153 CD160O95971 181 aa17.77■□□□□ 0.44
SMG6-212ENST00000573153 CTSLP07711 333 aa17.77■□□□□ 0.44
SMG6-212ENST00000573153 SRCP12931 536 aa17.77■□□□□ 0.44
SMG6-212ENST00000573153 HDAC4P56524 1084 aa17.77■□□□□ 0.44
SMG6-212ENST00000573153 SULT2A1Q06520 285 aa17.77■□□□□ 0.44
SMG6-212ENST00000573153 TTC31Q49AM3 519 aaPredicted RBP17.77■□□□□ 0.44
SMG6-212ENST00000573153 PPP1R15BQ5SWA1 713 aa17.77■□□□□ 0.44
SMG6-212ENST00000573153 RNF219Q5W0B1 726 aaPredicted RBP17.77■□□□□ 0.44
SMG6-212ENST00000573153 KIAA0895LQ68EN5 471 aa17.77■□□□□ 0.44
SMG6-212ENST00000573153 SH2D3CQ8N5H7 860 aa17.77■□□□□ 0.44
SMG6-212ENST00000573153 BAHD1Q8TBE0 780 aaPredicted RBP17.77■□□□□ 0.44
SMG6-212ENST00000573153 RXFP2Q8WXD0 754 aa17.77■□□□□ 0.44
SMG6-212ENST00000573153 PCMTD1Q96MG8 357 aaPredicted RBP17.77■□□□□ 0.44
SMG6-212ENST00000573153 CAMK1GQ96NX5 476 aa17.77■□□□□ 0.44
SMG6-212ENST00000573153 HAPLN3Q96S86 360 aa17.77■□□□□ 0.44
SMG6-212ENST00000573153 PPP1R9BQ96SB3 815 aa17.77■□□□□ 0.44
SMG6-212ENST00000573153 MIR1-1HGQ9H1L0 117 aa17.77■□□□□ 0.44
SMG6-212ENST00000573153 VPS51Q9UID3 782 aa17.77■□□□□ 0.44
SMG6-212ENST00000573153 FZD4Q9ULV1 537 aa17.77■□□□□ 0.44
SMG6-212ENST00000573153 ASPMQ8IZT6 3477 aa17.77■□□□□ 0.43
SMG6-212ENST00000573153 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.76■□□□□ 0.43
SMG6-212ENST00000573153 A0A1B0GTH6 734 aa17.76■□□□□ 0.43
SMG6-212ENST00000573153 A0A1B0GVT2 93 aa17.76■□□□□ 0.43
SMG6-212ENST00000573153 A0A1W2PQC6 194 aa17.76■□□□□ 0.43
SMG6-212ENST00000573153 FAM72CH0Y354 149 aa17.76■□□□□ 0.43
SMG6-212ENST00000573153 PLK4O00444 970 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms