RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 CNDP1Q96KN2 507 aa10.98□□□□□ -0.65
CCDC40-207ENST00000572253 AP4B1Q9Y6B7 739 aa10.98□□□□□ -0.65
CCDC40-207ENST00000572253 ERI2A8K979 691 aaKnown RBP10.98□□□□□ -0.65
CCDC40-207ENST00000572253 PDGFRBP09619 1106 aa10.98□□□□□ -0.65
CCDC40-207ENST00000572253 ME2P23368 584 aa10.98□□□□□ -0.65
CCDC40-207ENST00000572253 TLR1Q15399 786 aa10.98□□□□□ -0.65
CCDC40-207ENST00000572253 ADRM1Q16186 407 aa10.98□□□□□ -0.65
CCDC40-207ENST00000572253 DCAF6Q58WW2 860 aa10.98□□□□□ -0.65
CCDC40-207ENST00000572253 EGFL6Q8IUX8 553 aa10.98□□□□□ -0.65
CCDC40-207ENST00000572253 FAM81AQ8TBF8 368 aa10.98□□□□□ -0.65
CCDC40-207ENST00000572253 MRPL40Q9NQ50 206 aaKnown RBP10.98□□□□□ -0.65
CCDC40-207ENST00000572253 LZTS1Q9Y250 596 aa10.98□□□□□ -0.65
CCDC40-207ENST00000572253 USP3Q9Y6I4 520 aa10.98□□□□□ -0.65
CCDC40-207ENST00000572253 EP400Q96L91 3159 aa10.98□□□□□ -0.65
CCDC40-207ENST00000572253 PDLIM1O00151 329 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 MTSS1O43312 755 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 MPSTP25325 297 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 GNL1P36915 607 aaPredicted RBP10.97□□□□□ -0.65
CCDC40-207ENST00000572253 HERC3Q15034 1050 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 LIPMQ5VYY2 423 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 LCA5Q86VQ0 697 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 KCNMB4Q86W47 210 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 PGAM4Q8N0Y7 254 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 AHI1Q8N157 1196 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 CNKSR2Q8WXI2 1034 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 CNBD2Q96M20 576 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 OXCT2Q9BYC2 517 aaPredicted RBP10.97□□□□□ -0.65
CCDC40-207ENST00000572253 ACE2Q9BYF1 805 aaPredicted RBP10.97□□□□□ -0.65
CCDC40-207ENST00000572253 WDR55Q9H6Y2 383 aaPredicted RBP10.97□□□□□ -0.65
CCDC40-207ENST00000572253 OXSMQ9NWU1 459 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 PACSIN3Q9UKS6 424 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 SLC39A10Q9ULF5 831 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 PPP2R3BQ9Y5P8 575 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 CSADQ9Y600 493 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 G3V2L1 256 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 AP3B1O00203 1094 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 MATN2O00339 956 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 TSPAN1O60635 241 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 TMCC1O94876 653 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 PIGNO95427 931 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 AP2A1O95782 977 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 FAM58BPP0C7Q3 252 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 SAT1P21673 171 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 GRIA2P42262 883 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 NPY2RP49146 381 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 FRG1Q14331 258 aaKnown RBP10.97□□□□□ -0.65
CCDC40-207ENST00000572253 ANO4Q32M45 955 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 FBXL19Q6PCT2 694 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 NAPRTQ6XQN6 538 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 RBM44Q6ZP01 1051 aaKnown RBP10.97□□□□□ -0.65
CCDC40-207ENST00000572253 DRAXINQ8NBI3 349 aaPredicted RBP10.97□□□□□ -0.65
CCDC40-207ENST00000572253 RCN3Q96D15 328 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 PPP1R36Q96LQ0 422 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 FCRL3Q96P31 734 aaPredicted RBP10.97□□□□□ -0.65
CCDC40-207ENST00000572253 SUDS3Q9H7L9 328 aaPredicted RBP10.97□□□□□ -0.65
CCDC40-207ENST00000572253 WDR41Q9HAD4 459 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 VPS28Q9UK41 221 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 LCTP09848 1927 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 A0A1B0GVG6 124 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 KCNK1O00180 336 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 ADCY6O43306 1168 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 CABYRO75952 493 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 CRTAMO95727 393 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 CYP2C9P11712 490 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 THOP1P52888 689 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 LSM12Q3MHD2 195 aaKnown RBP10.97□□□□□ -0.65
CCDC40-207ENST00000572253 ARMC3Q5W041 872 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 ZYG11AQ6WRX3 759 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 BHLHE22Q8NFJ8 381 aaPredicted RBP10.97□□□□□ -0.65
CCDC40-207ENST00000572253 RNF217Q8TC41 542 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 MAPK15Q8TD08 544 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 VPS39Q96JC1 886 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 DRC3Q9H069 523 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 COPS7BQ9H9Q2 264 aaPredicted RBP10.97□□□□□ -0.65
CCDC40-207ENST00000572253 CAB39LQ9H9S4 337 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 LRRC4Q9HBW1 653 aa10.97□□□□□ -0.65
CCDC40-207ENST00000572253 DNAJA2O60884 412 aa10.96□□□□□ -0.65
CCDC40-207ENST00000572253 USP12O75317 370 aa10.96□□□□□ -0.65
CCDC40-207ENST00000572253 DAB1O75553 588 aa10.96□□□□□ -0.65
CCDC40-207ENST00000572253 GABBR2O75899 941 aa10.96□□□□□ -0.65
CCDC40-207ENST00000572253 PENKP01210 267 aaPredicted RBP10.96□□□□□ -0.65
CCDC40-207ENST00000572253 EPHA3P29320 983 aa10.96□□□□□ -0.65
CCDC40-207ENST00000572253 NUMBP49757 651 aa10.96□□□□□ -0.65
CCDC40-207ENST00000572253 PRPSAP1Q14558 356 aa10.96□□□□□ -0.65
CCDC40-207ENST00000572253 USP10Q14694 798 aaKnown RBP10.96□□□□□ -0.65
CCDC40-207ENST00000572253 AFAP1L2Q8N4X5 818 aa10.96□□□□□ -0.65
CCDC40-207ENST00000572253 NETO2Q8NC67 525 aa10.96□□□□□ -0.65
CCDC40-207ENST00000572253 PDCD6IPQ8WUM4 868 aaKnown RBP10.96□□□□□ -0.65
CCDC40-207ENST00000572253 TNIP3Q96KP6 325 aa10.96□□□□□ -0.65
CCDC40-207ENST00000572253 PRICKLE1Q96MT3 831 aaPredicted RBP10.96□□□□□ -0.65
CCDC40-207ENST00000572253 CATSPER2Q96P56 530 aa10.96□□□□□ -0.65
CCDC40-207ENST00000572253 HAUS8Q9BT25 410 aa10.96□□□□□ -0.65
CCDC40-207ENST00000572253 NUF2Q9BZD4 464 aa10.96□□□□□ -0.65
CCDC40-207ENST00000572253 DPEP3Q9H4B8 488 aa10.96□□□□□ -0.65
CCDC40-207ENST00000572253 IARS2Q9NSE4 1012 aaKnown RBP10.96□□□□□ -0.65
CCDC40-207ENST00000572253 SETD4Q9NVD3 440 aa10.96□□□□□ -0.65
CCDC40-207ENST00000572253 RAD54BQ9Y620 910 aa10.96□□□□□ -0.65
CCDC40-207ENST00000572253 M0QYT0 321 aa10.96□□□□□ -0.65
CCDC40-207ENST00000572253 NCAM2O15394 837 aa10.96□□□□□ -0.65
CCDC40-207ENST00000572253 DDHD2O94830 711 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms