RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 TRIM59Q8IWR1 403 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 LRRC8AQ8IWT6 810 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 TUSC5Q8IXB3 177 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 NPAS3Q8IXF0 933 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 NELFCDQ8IXH7 590 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 EFHBQ8N7U6 833 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 ZNF321PQ8N8H1 164 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 DNAAF3Q8N9W5 541 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 Q8NFD4 153 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 KAT2BQ92831 832 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 P2RX5Q93086 422 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 VPS33AQ96AX1 596 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 OPTNQ96CV9 577 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 LRRC39Q96DD0 335 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 CYFIP2Q96F07 1278 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 PDLIM5Q96HC4 596 aaKnown RBP3.66□□□□□ -1.82
SMG6-208ENST00000570874 ERO1AQ96HE7 468 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 SCLYQ96I15 445 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 IFT74Q96LB3 600 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 FGD4Q96M96 766 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 RAB3IPQ96QF0 476 aaPredicted RBP3.66□□□□□ -1.82
SMG6-208ENST00000570874 TSG101Q99816 390 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 FAM118BQ9BPY3 351 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 REEP2Q9BRK0 252 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 ZNF577Q9BSK1 485 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 TUBB2BQ9BVA1 445 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 COLEC11Q9BWP8 271 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 TEKT3Q9BXF9 490 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 PACSIN1Q9BY11 444 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 ABCG8Q9H221 673 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 VPS16Q9H269 839 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 RASSF4Q9H2L5 321 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 GORASP2Q9H8Y8 452 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 KCNK13Q9HB14 408 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 RRAGCQ9HB90 399 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 ZFYVE1Q9HBF4 777 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 PNPLA8Q9NP80 782 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 OBP2BQ9NPH6 170 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 KCNH7Q9NS40 1196 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 DECR2Q9NUI1 292 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 PANK4Q9NVE7 773 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 TMEM160Q9NX00 188 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.66□□□□□ -1.82
SMG6-208ENST00000570874 LMCD1Q9NZU5 365 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 RSPH14Q9UHP6 348 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 RWDD2AQ9UIY3 292 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 TLK1Q9UKI8 766 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 ZNF215Q9UL58 517 aaPredicted RBP3.66□□□□□ -1.82
SMG6-208ENST00000570874 DLGAP4Q9Y2H0 992 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 USP15Q9Y4E8 981 aaPredicted RBP3.66□□□□□ -1.82
SMG6-208ENST00000570874 CCL27Q9Y4X3 112 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 PCDHA2Q9Y5H9 948 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 CSADQ9Y600 493 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 TLL2Q9Y6L7 1015 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 COMMD3-BMI1R4GMX3 469 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 KDM3AQ9Y4C1 1321 aa3.66□□□□□ -1.82
SMG6-208ENST00000570874 ZMYM2Q9UBW7 1377 aa3.65□□□□□ -1.82
SMG6-208ENST00000570874 SCN5AQ14524 2016 aa3.65□□□□□ -1.82
SMG6-208ENST00000570874 A0A1B0GTH6 734 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 PMS2P1A4D2B8 440 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 TRIM43BA6NCK2 446 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 SLC9B1P1A6NJY1 282 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 AGAP14A8MT82 685 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 ZNF879B4DU55 563 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 E9PBE3 544 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 CBX4O00257 560 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 TO15178 435 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 CD3EAPO15446 510 aaKnown RBP3.65□□□□□ -1.83
SMG6-208ENST00000570874 TBC1D4O60343 1298 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 H2AFYO75367 372 aaKnown RBP3.65□□□□□ -1.83
SMG6-208ENST00000570874 ZNF189O75820 626 aaPredicted RBP3.65□□□□□ -1.83
SMG6-208ENST00000570874 BCAS2O75934 225 aaPredicted RBP3.65□□□□□ -1.83
SMG6-208ENST00000570874 KLHL2O95198 593 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 ATE1O95260 518 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 CRTAMO95727 393 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 INHAP05111 366 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 PGK2P07205 417 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 ABCB1P08183 1280 aaPredicted RBP3.65□□□□□ -1.83
SMG6-208ENST00000570874 NR3C2P08235 984 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 PRR35P0CG20 571 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 CYP2C8P10632 490 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 ANXA8P13928 327 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 PECAM1P16284 738 aaPredicted RBP3.65□□□□□ -1.83
SMG6-208ENST00000570874 CCNE1P24864 410 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 CTSSP25774 331 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 RPA1P27694 616 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 HTR1BP28222 390 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 ALDH4A1P30038 563 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 NMT1P30419 496 aaKnown RBP3.65□□□□□ -1.83
SMG6-208ENST00000570874 MAPK4P31152 587 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 TTKP33981 857 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 EVI2BP34910 448 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 GRK5P34947 590 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 TRIM23P36406 574 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 NUP62P37198 522 aaPredicted RBP3.65□□□□□ -1.83
SMG6-208ENST00000570874 PBX1P40424 430 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 EIF2DP41214 584 aaKnown RBP3.65□□□□□ -1.83
SMG6-208ENST00000570874 WNT5AP41221 380 aa3.65□□□□□ -1.83
SMG6-208ENST00000570874 BUD31P41223 144 aaPredicted RBP3.65□□□□□ -1.83
SMG6-208ENST00000570874 MAGEA4P43358 317 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms