RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 TBC1D3Q8IZP1 549 aaPredicted RBP13.52□□□□□ -0.25
SPG7-221ENST00000569720 AADATQ8N5Z0 425 aa13.52□□□□□ -0.25
SPG7-221ENST00000569720 OR8D1Q8WZ84 308 aa13.52□□□□□ -0.25
SPG7-221ENST00000569720 SHC3Q92529 594 aa13.52□□□□□ -0.25
SPG7-221ENST00000569720 RPRD1AQ96P16 312 aaPredicted RBP13.52□□□□□ -0.25
SPG7-221ENST00000569720 SLC2A13Q96QE2 648 aa13.52□□□□□ -0.25
SPG7-221ENST00000569720 CPXM1Q96SM3 734 aa13.52□□□□□ -0.25
SPG7-221ENST00000569720 ELF4Q99607 663 aaPredicted RBP13.52□□□□□ -0.25
SPG7-221ENST00000569720 PRMT1Q99873 361 aaKnown RBP13.52□□□□□ -0.25
SPG7-221ENST00000569720 SYNCQ9H7C4 482 aa13.52□□□□□ -0.25
SPG7-221ENST00000569720 GDF3Q9NR23 364 aa13.52□□□□□ -0.25
SPG7-221ENST00000569720 PCDHGC3Q9UN70 934 aa13.52□□□□□ -0.25
SPG7-221ENST00000569720 COL5A1P20908 1838 aaPredicted RBP13.52□□□□□ -0.25
SPG7-221ENST00000569720 ADAMTS20P59510 1910 aa13.52□□□□□ -0.25
SPG7-221ENST00000569720 LAMA5O15230 3695 aa13.52□□□□□ -0.25
SPG7-221ENST00000569720 FREM2Q5SZK8 3169 aa13.51□□□□□ -0.25
SPG7-221ENST00000569720 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.51□□□□□ -0.25
SPG7-221ENST00000569720 BECN2A8MW95 431 aa13.51□□□□□ -0.25
SPG7-221ENST00000569720 GRAP2O75791 330 aa13.51□□□□□ -0.25
SPG7-221ENST00000569720 ITGAVP06756 1048 aa13.51□□□□□ -0.25
SPG7-221ENST00000569720 ZNF18P17022 549 aa13.51□□□□□ -0.25
SPG7-221ENST00000569720 ARRB1P49407 418 aaPredicted RBP13.51□□□□□ -0.25
SPG7-221ENST00000569720 VASPP50552 380 aaPredicted RBP13.51□□□□□ -0.25
SPG7-221ENST00000569720 ADPRHP54922 357 aa13.51□□□□□ -0.25
SPG7-221ENST00000569720 NME3Q13232 169 aa13.51□□□□□ -0.25
SPG7-221ENST00000569720 ZNF177Q13360 481 aaPredicted RBP13.51□□□□□ -0.25
SPG7-221ENST00000569720 ACCSLQ4AC99 568 aa13.51□□□□□ -0.25
SPG7-221ENST00000569720 CCDC157Q569K6 752 aa13.51□□□□□ -0.25
SPG7-221ENST00000569720 FBXL22Q6P050 247 aa13.51□□□□□ -0.25
SPG7-221ENST00000569720 PRPF39Q86UA1 669 aaKnown RBP13.51□□□□□ -0.25
SPG7-221ENST00000569720 CIR1Q86X95 450 aaPredicted RBP13.51□□□□□ -0.25
SPG7-221ENST00000569720 PASD1Q8IV76 773 aa13.51□□□□□ -0.25
SPG7-221ENST00000569720 WDTC1Q8N5D0 677 aa13.51□□□□□ -0.25
SPG7-221ENST00000569720 SERAC1Q96JX3 654 aa13.51□□□□□ -0.25
SPG7-221ENST00000569720 KDM4CQ9H3R0 1056 aa13.51□□□□□ -0.25
SPG7-221ENST00000569720 EBF2Q9HAK2 575 aa13.51□□□□□ -0.25
SPG7-221ENST00000569720 RRN3Q9NYV6 651 aa13.51□□□□□ -0.25
SPG7-221ENST00000569720 ITPR1Q14643 2758 aa13.51□□□□□ -0.25
SPG7-221ENST00000569720 C1QTNF3-AMACRE9PGA6 284 aa13.5□□□□□ -0.25
SPG7-221ENST00000569720 SLC7A4O43246 635 aa13.5□□□□□ -0.25
SPG7-221ENST00000569720 CLDN11O75508 207 aa13.5□□□□□ -0.25
SPG7-221ENST00000569720 WNT1P04628 370 aa13.5□□□□□ -0.25
SPG7-221ENST00000569720 PON1P27169 355 aa13.5□□□□□ -0.25
SPG7-221ENST00000569720 NOS2P35228 1153 aa13.5□□□□□ -0.25
SPG7-221ENST00000569720 NUDT1P36639 197 aa13.5□□□□□ -0.25
SPG7-221ENST00000569720 NUMBP49757 651 aa13.5□□□□□ -0.25
SPG7-221ENST00000569720 BPIFB4P59827 614 aa13.5□□□□□ -0.25
SPG7-221ENST00000569720 SLC6A3Q01959 620 aa13.5□□□□□ -0.25
SPG7-221ENST00000569720 AUHQ13825 339 aaKnown RBP13.5□□□□□ -0.25
SPG7-221ENST00000569720 KCNJ12Q14500 433 aa13.5□□□□□ -0.25
SPG7-221ENST00000569720 FAM183BPQ6ZVS7 135 aa13.5□□□□□ -0.25
SPG7-221ENST00000569720 ZDHHC17Q8IUH5 632 aa13.5□□□□□ -0.25
SPG7-221ENST00000569720 OXR1Q8N573 874 aa13.5□□□□□ -0.25
SPG7-221ENST00000569720 C1orf131Q8NDD1 294 aaKnown RBP13.5□□□□□ -0.25
SPG7-221ENST00000569720 MDM1Q8TC05 714 aa13.5□□□□□ -0.25
SPG7-221ENST00000569720 BPIFA3Q9BQP9 254 aa13.5□□□□□ -0.25
SPG7-221ENST00000569720 PDCL3Q9H2J4 239 aa13.5□□□□□ -0.25
SPG7-221ENST00000569720 VPS28Q9UK41 221 aa13.5□□□□□ -0.25
SPG7-221ENST00000569720 VANGL2Q9ULK5 521 aa13.5□□□□□ -0.25
SPG7-221ENST00000569720 FARP1Q9Y4F1 1045 aaPredicted RBP13.5□□□□□ -0.25
SPG7-221ENST00000569720 NBEAQ8NFP9 2946 aa13.5□□□□□ -0.25
SPG7-221ENST00000569720 ATRXP46100 2492 aa13.5□□□□□ -0.25
SPG7-221ENST00000569720 A0A1W2PR77 199 aa13.49□□□□□ -0.25
SPG7-221ENST00000569720 M0QYT0 321 aa13.49□□□□□ -0.25
SPG7-221ENST00000569720 TLR4O00206 839 aa13.49□□□□□ -0.25
SPG7-221ENST00000569720 ALOX15BO15296 676 aa13.49□□□□□ -0.25
SPG7-221ENST00000569720 ATP9BO43861 1147 aa13.49□□□□□ -0.25
SPG7-221ENST00000569720 MAGEC1O60732 1142 aa13.49□□□□□ -0.25
SPG7-221ENST00000569720 DAB1O75553 588 aa13.49□□□□□ -0.25
SPG7-221ENST00000569720 LDOC1O95751 146 aaPredicted RBP13.49□□□□□ -0.25
SPG7-221ENST00000569720 CDK4P11802 303 aa13.49□□□□□ -0.25
SPG7-221ENST00000569720 VAV1P15498 845 aa13.49□□□□□ -0.25
SPG7-221ENST00000569720 DRD3P35462 400 aa13.49□□□□□ -0.25
SPG7-221ENST00000569720 CDH4P55283 916 aa13.49□□□□□ -0.25
SPG7-221ENST00000569720 KRT83P78385 493 aa13.49□□□□□ -0.25
SPG7-221ENST00000569720 CENPCQ03188 943 aa13.49□□□□□ -0.25
SPG7-221ENST00000569720 DLG2Q15700 870 aa13.49□□□□□ -0.25
SPG7-221ENST00000569720 SMAD1Q15797 465 aaKnown RBP13.49□□□□□ -0.25
SPG7-221ENST00000569720 PRAMEF14Q5SWL7 426 aa13.49□□□□□ -0.25
SPG7-221ENST00000569720 NAPEPLDQ6IQ20 393 aa13.49□□□□□ -0.25
SPG7-221ENST00000569720 CXorf57Q6NSI4 855 aaKnown RBP13.49□□□□□ -0.25
SPG7-221ENST00000569720 OLFML1Q6UWY5 402 aa13.49□□□□□ -0.25
SPG7-221ENST00000569720 SLC26A9Q7LBE3 791 aa13.49□□□□□ -0.25
SPG7-221ENST00000569720 GATAD2AQ86YP4 633 aa13.49□□□□□ -0.25
SPG7-221ENST00000569720 FAM114A1Q8IWE2 563 aa13.49□□□□□ -0.25
SPG7-221ENST00000569720 PDCD7Q8N8D1 485 aaKnown RBP13.49□□□□□ -0.25
SPG7-221ENST00000569720 ZNF397Q8NF99 534 aaPredicted RBP13.49□□□□□ -0.25
SPG7-221ENST00000569720 FRS2Q8WU20 508 aa13.49□□□□□ -0.25
SPG7-221ENST00000569720 CNDP2Q96KP4 475 aaKnown RBP13.49□□□□□ -0.25
SPG7-221ENST00000569720 CCDC114Q96M63 670 aa13.49□□□□□ -0.25
SPG7-221ENST00000569720 FEM1AQ9BSK4 669 aa13.49□□□□□ -0.25
SPG7-221ENST00000569720 SIK2Q9H0K1 926 aa13.49□□□□□ -0.25
SPG7-221ENST00000569720 MUC3BQ9H195 1237 aa13.49□□□□□ -0.25
SPG7-221ENST00000569720 TMEM51Q9NW97 253 aa13.49□□□□□ -0.25
SPG7-221ENST00000569720 DKK4Q9UBT3 224 aa13.49□□□□□ -0.25
SPG7-221ENST00000569720 DNAJC12Q9UKB3 198 aa13.49□□□□□ -0.25
SPG7-221ENST00000569720 DMTF1Q9Y222 760 aa13.49□□□□□ -0.25
SPG7-221ENST00000569720 GPSM3Q9Y4H4 160 aa13.49□□□□□ -0.25
SPG7-221ENST00000569720 PAXBP1Q9Y5B6 917 aa13.49□□□□□ -0.25
SPG7-221ENST00000569720 HS3ST4Q9Y661 456 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms