RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 CACNA1GO43497 2377 aa14.25□□□□□ -0.13
GTF3C1-211ENST00000569653 M0QYT0 321 aa14.25□□□□□ -0.13
GTF3C1-211ENST00000569653 MT-CO1P00395 513 aa14.25□□□□□ -0.13
GTF3C1-211ENST00000569653 CXCR3P49682 368 aa14.25□□□□□ -0.13
GTF3C1-211ENST00000569653 PTK2Q05397 1052 aa14.25□□□□□ -0.13
GTF3C1-211ENST00000569653 HNRNPDQ14103 355 aaKnown RBP14.25□□□□□ -0.13
GTF3C1-211ENST00000569653 EFHC1Q5JVL4 640 aa14.25□□□□□ -0.13
GTF3C1-211ENST00000569653 KLHDC7AQ5VTJ3 777 aa14.25□□□□□ -0.13
GTF3C1-211ENST00000569653 IL27RAQ6UWB1 636 aa14.25□□□□□ -0.13
GTF3C1-211ENST00000569653 NOP9Q86U38 636 aaKnown RBP14.25□□□□□ -0.13
GTF3C1-211ENST00000569653 FAM81BQ96LP2 452 aa14.25□□□□□ -0.13
GTF3C1-211ENST00000569653 RPRD1AQ96P16 312 aaPredicted RBP14.25□□□□□ -0.13
GTF3C1-211ENST00000569653 FEM1AQ9BSK4 669 aa14.25□□□□□ -0.13
GTF3C1-211ENST00000569653 CAAP1Q9H8G2 361 aa14.25□□□□□ -0.13
GTF3C1-211ENST00000569653 ARHGEF38Q9NXL2 777 aa14.25□□□□□ -0.13
GTF3C1-211ENST00000569653 ZNF212Q9UDV6 495 aa14.25□□□□□ -0.13
GTF3C1-211ENST00000569653 FZD4Q9ULV1 537 aa14.25□□□□□ -0.13
GTF3C1-211ENST00000569653 SCML1Q9UN30 329 aa14.25□□□□□ -0.13
GTF3C1-211ENST00000569653 CEP83Q9Y592 693 aa14.25□□□□□ -0.13
GTF3C1-211ENST00000569653 KNTC1P50748 2209 aa14.25□□□□□ -0.13
GTF3C1-211ENST00000569653 TDRD6O60522 2096 aaKnown RBP14.24□□□□□ -0.13
GTF3C1-211ENST00000569653 MYLKQ15746 1914 aa14.24□□□□□ -0.13
GTF3C1-211ENST00000569653 CBX4O00257 560 aa14.24□□□□□ -0.13
GTF3C1-211ENST00000569653 VILLO15195 856 aa14.24□□□□□ -0.13
GTF3C1-211ENST00000569653 EPHB6O15197 1021 aa14.24□□□□□ -0.13
GTF3C1-211ENST00000569653 ATP9BO43861 1147 aa14.24□□□□□ -0.13
GTF3C1-211ENST00000569653 SNAP91O60641 907 aa14.24□□□□□ -0.13
GTF3C1-211ENST00000569653 RTN2O75298 545 aa14.24□□□□□ -0.13
GTF3C1-211ENST00000569653 TRIM16O95361 564 aa14.24□□□□□ -0.13
GTF3C1-211ENST00000569653 CYP11B1P15538 503 aa14.24□□□□□ -0.13
GTF3C1-211ENST00000569653 GOT1P17174 413 aa14.24□□□□□ -0.13
GTF3C1-211ENST00000569653 NOS2P35228 1153 aa14.24□□□□□ -0.13
GTF3C1-211ENST00000569653 FLT3P36888 993 aa14.24□□□□□ -0.13
GTF3C1-211ENST00000569653 KLK7P49862 253 aa14.24□□□□□ -0.13
GTF3C1-211ENST00000569653 SLC12A1Q13621 1099 aa14.24□□□□□ -0.13
GTF3C1-211ENST00000569653 ELAVL3Q14576 367 aaKnown RBP14.24□□□□□ -0.13
GTF3C1-211ENST00000569653 POM121L1PQ3SYA9 428 aa14.24□□□□□ -0.13
GTF3C1-211ENST00000569653 RABGAP1LQ5R372 815 aa14.24□□□□□ -0.13
GTF3C1-211ENST00000569653 TAF3Q5VWG9 929 aa14.24□□□□□ -0.13
GTF3C1-211ENST00000569653 Q6ZVU0 165 aa14.24□□□□□ -0.13
GTF3C1-211ENST00000569653 BNIPLQ7Z465 357 aa14.24□□□□□ -0.13
GTF3C1-211ENST00000569653 XYLT1Q86Y38 959 aa14.24□□□□□ -0.13
GTF3C1-211ENST00000569653 OR2T34Q8NGX1 318 aa14.24□□□□□ -0.13
GTF3C1-211ENST00000569653 TBCBQ99426 244 aa14.24□□□□□ -0.13
GTF3C1-211ENST00000569653 OMDQ99983 421 aa14.24□□□□□ -0.13
GTF3C1-211ENST00000569653 GANQ9H2C0 597 aa14.24□□□□□ -0.13
GTF3C1-211ENST00000569653 ARHGAP20Q9P2F6 1191 aa14.24□□□□□ -0.13
GTF3C1-211ENST00000569653 NCKAP1Q9Y2A7 1128 aa14.24□□□□□ -0.13
GTF3C1-211ENST00000569653 TBC1D30Q9Y2I9 924 aa14.24□□□□□ -0.13
GTF3C1-211ENST00000569653 PCDHB9Q9Y5E1 797 aa14.24□□□□□ -0.13
GTF3C1-211ENST00000569653 ADAMTS20P59510 1910 aa14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 IGSF10Q6WRI0 2623 aa14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 A0A1B0GTQ1 180 aa14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 TMEM8BA6NDV4 472 aa14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 K7ERQ8 282 aa14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 FLRT2O43155 660 aa14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 LATO43561 262 aa14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 MOCS3O95396 460 aa14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 IL1BP01584 269 aa14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 CTSLP07711 333 aa14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 SLC2A3P11169 496 aa14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 PRKCSHP14314 528 aaPredicted RBP14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 ABCB4P21439 1286 aa14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 C5AR1P21730 350 aa14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 ERCC5P28715 1186 aaPredicted RBP14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 KRT9P35527 623 aa14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 GABRB2P47870 512 aa14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 VASPP50552 380 aaPredicted RBP14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 TAS2R38P59533 333 aa14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 RNASE9P60153 205 aaKnown RBP14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 RACK1P63244 317 aaKnown RBP14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 SCAPQ12770 1279 aa14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 CNTN1Q12860 1018 aa14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 RAPGEF1Q13905 1077 aa14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 TEAD4Q15561 434 aa14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 TTC39BQ5VTQ0 682 aaPredicted RBP14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 AGBL4Q5VU57 503 aa14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 RNF219Q5W0B1 726 aaPredicted RBP14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 CCNI2Q6ZMN8 369 aaPredicted RBP14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 GATAD2AQ86YP4 633 aa14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 CCDC117Q8IWD4 279 aaPredicted RBP14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 GPT2Q8TD30 523 aa14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 RHBDD1Q8TEB9 315 aa14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 SLC20A1Q8WUM9 679 aa14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 RNF34Q969K3 372 aa14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 TKTL2Q9H0I9 626 aa14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 SIK2Q9H0K1 926 aa14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 TAB2Q9NYJ8 693 aa14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 PPM1HQ9ULR3 514 aa14.23□□□□□ -0.13
GTF3C1-211ENST00000569653 BPTFQ12830 3046 aa14.22□□□□□ -0.13
GTF3C1-211ENST00000569653 A0A0D9SEW6 157 aa14.22□□□□□ -0.13
GTF3C1-211ENST00000569653 GOLGA8CPA6NN73 597 aa14.22□□□□□ -0.13
GTF3C1-211ENST00000569653 F8VZ95 297 aa14.22□□□□□ -0.13
GTF3C1-211ENST00000569653 SMAD6O43541 496 aaKnown RBP14.22□□□□□ -0.13
GTF3C1-211ENST00000569653 PCDHGA12O60330 932 aa14.22□□□□□ -0.13
GTF3C1-211ENST00000569653 RNASEH1O60930 286 aaKnown RBP14.22□□□□□ -0.13
GTF3C1-211ENST00000569653 MBD3O95983 291 aa14.22□□□□□ -0.13
GTF3C1-211ENST00000569653 ADH1BP00325 375 aa14.22□□□□□ -0.13
GTF3C1-211ENST00000569653 MMEP08473 750 aa14.22□□□□□ -0.13
GTF3C1-211ENST00000569653 SRCP12931 536 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms