RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-209ENST00000569243 PCDH17O14917 1159 aa3.71□□□□□ -1.82
UBR1-209ENST00000569243 PPP1R3DO95685 299 aa3.71□□□□□ -1.82
UBR1-209ENST00000569243 MYZAPP0CAP1 466 aa3.71□□□□□ -1.82
UBR1-209ENST00000569243 HARSP12081 509 aaKnown RBP3.71□□□□□ -1.82
UBR1-209ENST00000569243 CHRNB2P17787 502 aa3.71□□□□□ -1.82
UBR1-209ENST00000569243 GRK5P34947 590 aa3.71□□□□□ -1.82
UBR1-209ENST00000569243 CDK7P50613 346 aa3.71□□□□□ -1.82
UBR1-209ENST00000569243 POLE2P56282 527 aa3.71□□□□□ -1.82
UBR1-209ENST00000569243 GRM4Q14833 912 aa3.71□□□□□ -1.82
UBR1-209ENST00000569243 RAB30Q15771 203 aa3.71□□□□□ -1.82
UBR1-209ENST00000569243 PLK5Q496M5 336 aa3.71□□□□□ -1.82
UBR1-209ENST00000569243 FAM209BQ5JX69 171 aa3.71□□□□□ -1.82
UBR1-209ENST00000569243 SPSB3Q6PJ21 355 aa3.71□□□□□ -1.82
UBR1-209ENST00000569243 CLIP4Q8N3C7 705 aa3.71□□□□□ -1.82
UBR1-209ENST00000569243 TMEM163Q8TC26 289 aa3.71□□□□□ -1.82
UBR1-209ENST00000569243 ZNF566Q969W8 418 aa3.71□□□□□ -1.82
UBR1-209ENST00000569243 REXO5Q96IC2 774 aaKnown RBP3.71□□□□□ -1.82
UBR1-209ENST00000569243 DUX5Q96PT3 197 aa3.71□□□□□ -1.82
UBR1-209ENST00000569243 TBCBQ99426 244 aa3.71□□□□□ -1.82
UBR1-209ENST00000569243 NAA15Q9BXJ9 866 aaKnown RBP3.71□□□□□ -1.82
UBR1-209ENST00000569243 B3GNT4Q9C0J1 378 aa3.71□□□□□ -1.82
UBR1-209ENST00000569243 KCNG2Q9UJ96 466 aa3.71□□□□□ -1.82
UBR1-209ENST00000569243 PCDHGB1Q9Y5G3 927 aa3.71□□□□□ -1.82
UBR1-209ENST00000569243 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.7□□□□□ -1.82
UBR1-209ENST00000569243 MBD3L5A6NJ08 208 aaPredicted RBP3.7□□□□□ -1.82
UBR1-209ENST00000569243 APAF1O14727 1248 aa3.7□□□□□ -1.82
UBR1-209ENST00000569243 SLC16A5O15375 505 aa3.7□□□□□ -1.82
UBR1-209ENST00000569243 LARGE1O95461 756 aa3.7□□□□□ -1.82
UBR1-209ENST00000569243 FCGR1AP12314 374 aa3.7□□□□□ -1.82
UBR1-209ENST00000569243 GNLYP22749 145 aa3.7□□□□□ -1.82
UBR1-209ENST00000569243 GNALP38405 381 aa3.7□□□□□ -1.82
UBR1-209ENST00000569243 TRAF1Q13077 416 aa3.7□□□□□ -1.82
UBR1-209ENST00000569243 PMS2P11Q13670 270 aa3.7□□□□□ -1.82
UBR1-209ENST00000569243 SF3B4Q15427 424 aaKnown RBP eCLIP3.7□□□□□ -1.828e-6■□□□□ 8.7
UBR1-209ENST00000569243 FSCBQ5H9T9 825 aa3.7□□□□□ -1.82
UBR1-209ENST00000569243 IZUMO3Q5VZ72 239 aa3.7□□□□□ -1.82
UBR1-209ENST00000569243 ANKRD40Q6AI12 368 aa3.7□□□□□ -1.82
UBR1-209ENST00000569243 PRSS57Q6UWY2 283 aa3.7□□□□□ -1.82
UBR1-209ENST00000569243 C16orf82Q7Z2V1 217 aa3.7□□□□□ -1.82
UBR1-209ENST00000569243 FAM217AQ8IXS0 508 aa3.7□□□□□ -1.82
UBR1-209ENST00000569243 OR2C3Q8N628 320 aa3.7□□□□□ -1.82
UBR1-209ENST00000569243 ENDOVQ8N8Q3 282 aaKnown RBP3.7□□□□□ -1.82
UBR1-209ENST00000569243 FAM216AQ8WUB2 273 aa3.7□□□□□ -1.82
UBR1-209ENST00000569243 CCDC136Q96JN2 1154 aa3.7□□□□□ -1.82
UBR1-209ENST00000569243 OSBPL5Q9H0X9 879 aaPredicted RBP3.7□□□□□ -1.82
UBR1-209ENST00000569243 SLC12A4Q9UP95 1085 aa3.7□□□□□ -1.82
UBR1-209ENST00000569243 COPG1Q9Y678 874 aaKnown RBP3.7□□□□□ -1.82
UBR1-209ENST00000569243 SMTNL1A8MU46 457 aa3.69□□□□□ -1.82
UBR1-209ENST00000569243 PLA2G6O60733 806 aa3.69□□□□□ -1.82
UBR1-209ENST00000569243 CAND2O75155 1236 aa3.69□□□□□ -1.82
UBR1-209ENST00000569243 SOX30O94993 753 aa3.69□□□□□ -1.82
UBR1-209ENST00000569243 HLA-DQA2P01906 255 aa3.69□□□□□ -1.82
UBR1-209ENST00000569243 NPPBP16860 134 aa3.69□□□□□ -1.82
UBR1-209ENST00000569243 HOXB9P17482 250 aaPredicted RBP3.69□□□□□ -1.82
UBR1-209ENST00000569243 TNFSF4P23510 183 aa3.69□□□□□ -1.82
UBR1-209ENST00000569243 TNFSF8P32971 234 aa3.69□□□□□ -1.82
UBR1-209ENST00000569243 RFX5P48382 616 aaPredicted RBP3.69□□□□□ -1.82
UBR1-209ENST00000569243 OAZ1P54368 228 aa3.69□□□□□ -1.82
UBR1-209ENST00000569243 ALDH18A1P54886 795 aaKnown RBP3.69□□□□□ -1.82
UBR1-209ENST00000569243 IZUMO4Q1ZYL8 232 aa3.69□□□□□ -1.82
UBR1-209ENST00000569243 TRIM60Q495X7 471 aa3.69□□□□□ -1.82
UBR1-209ENST00000569243 ZNF569Q5MCW4 686 aa3.69□□□□□ -1.82
UBR1-209ENST00000569243 PRAMEF19Q5SWL8 479 aa3.69□□□□□ -1.82
UBR1-209ENST00000569243 CCDC181Q5TID7 509 aa3.69□□□□□ -1.82
UBR1-209ENST00000569243 CCSAPQ6IQ19 270 aaPredicted RBP3.69□□□□□ -1.82
UBR1-209ENST00000569243 RINLQ6ZS11 566 aa3.69□□□□□ -1.82
UBR1-209ENST00000569243 CCAR1Q8IX12 1150 aaKnown RBP3.69□□□□□ -1.82
UBR1-209ENST00000569243 ZDHHC23Q8IYP9 409 aa3.69□□□□□ -1.82
UBR1-209ENST00000569243 DPP10Q8N608 796 aa3.69□□□□□ -1.82
UBR1-209ENST00000569243 IP6K1Q92551 441 aa3.69□□□□□ -1.82
UBR1-209ENST00000569243 ZNF419Q96HQ0 510 aaPredicted RBP3.69□□□□□ -1.82
UBR1-209ENST00000569243 TP63Q9H3D4 680 aaPredicted RBP3.69□□□□□ -1.82
UBR1-209ENST00000569243 KLHL31Q9H511 634 aa3.69□□□□□ -1.82
UBR1-209ENST00000569243 CCDC134Q9H6E4 229 aa3.69□□□□□ -1.82
UBR1-209ENST00000569243 ACTR5Q9H9F9 607 aaPredicted RBP3.69□□□□□ -1.82
UBR1-209ENST00000569243 FAM50BQ9Y247 325 aa3.69□□□□□ -1.82
UBR1-209ENST00000569243 CEP83Q9Y592 693 aa3.69□□□□□ -1.82
UBR1-209ENST00000569243 RAI2Q9Y5P3 530 aa3.69□□□□□ -1.82
UBR1-209ENST00000569243 TBC1D3DA0A087WVF3 549 aa3.68□□□□□ -1.82
UBR1-209ENST00000569243 TBC1D3IA0A087WXS9 549 aa3.68□□□□□ -1.82
UBR1-209ENST00000569243 TBC1D3EA0A087X179 549 aa3.68□□□□□ -1.82
UBR1-209ENST00000569243 TBC1D3KA0A087X1G2 549 aa3.68□□□□□ -1.82
UBR1-209ENST00000569243 TBC1D3BA6NDS4 549 aa3.68□□□□□ -1.82
UBR1-209ENST00000569243 TMEM247A6NEH6 219 aa3.68□□□□□ -1.82
UBR1-209ENST00000569243 TBC1D3FA6NER0 549 aaPredicted RBP3.68□□□□□ -1.82
UBR1-209ENST00000569243 TBC1D3LB9A6J9 549 aa3.68□□□□□ -1.82
UBR1-209ENST00000569243 I6L893 689 aaPredicted RBP3.68□□□□□ -1.82
UBR1-209ENST00000569243 M0QYT0 321 aa3.68□□□□□ -1.82
UBR1-209ENST00000569243 ASAP2O43150 1006 aa3.68□□□□□ -1.82
UBR1-209ENST00000569243 RPP40O75818 363 aaKnown RBP3.68□□□□□ -1.82
UBR1-209ENST00000569243 KRT36O76013 467 aa3.68□□□□□ -1.82
UBR1-209ENST00000569243 ZNF432O94892 652 aa3.68□□□□□ -1.82
UBR1-209ENST00000569243 TBC1D3HP0C7X1 549 aa3.68□□□□□ -1.82
UBR1-209ENST00000569243 COMPP49747 757 aaPredicted RBP3.68□□□□□ -1.82
UBR1-209ENST00000569243 ERVFC1-1P60608 527 aa3.68□□□□□ -1.82
UBR1-209ENST00000569243 RHAGQ02094 409 aa3.68□□□□□ -1.82
UBR1-209ENST00000569243 POU5F1BQ06416 359 aa3.68□□□□□ -1.82
UBR1-209ENST00000569243 TBRG1Q3YBR2 411 aa3.68□□□□□ -1.82
UBR1-209ENST00000569243 HSP90AB2PQ58FF8 381 aa3.68□□□□□ -1.82
UBR1-209ENST00000569243 C9orf57Q5W0N0 161 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms