RNA–Protein interactions for RNA: ENST00000568922.1

GGA2-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 2

Gene GGA2, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-213ENST00000568922 TCAF2A6NFQ2 919 aa12.9□□□□□ -0.34
GGA2-213ENST00000568922 E7EVH7 732 aa12.9□□□□□ -0.34
GGA2-213ENST00000568922 NRG2O14511 850 aaPredicted RBP12.9□□□□□ -0.34
GGA2-213ENST00000568922 EIF3HO15372 352 aaKnown RBP eCLIP12.9□□□□□ -0.348e-23■■□□□ 13.6
GGA2-213ENST00000568922 TMEM63AO94886 807 aa12.9□□□□□ -0.34
GGA2-213ENST00000568922 TPSB2P20231 275 aa12.9□□□□□ -0.34
GGA2-213ENST00000568922 AVPR1AP37288 418 aa12.9□□□□□ -0.34
GGA2-213ENST00000568922 ARL4CP56559 192 aa12.9□□□□□ -0.34
GGA2-213ENST00000568922 KCNC3Q14003 757 aa12.9□□□□□ -0.34
GGA2-213ENST00000568922 POLD3Q15054 466 aaPredicted RBP12.9□□□□□ -0.34
GGA2-213ENST00000568922 TPSAB1Q15661 275 aa12.9□□□□□ -0.34
GGA2-213ENST00000568922 UAP1Q16222 522 aaPredicted RBP12.9□□□□□ -0.34
GGA2-213ENST00000568922 HIF1AQ16665 826 aa12.9□□□□□ -0.34
GGA2-213ENST00000568922 C6orf118Q5T5N4 469 aa12.9□□□□□ -0.34
GGA2-213ENST00000568922 ARHGAP36Q6ZRI8 547 aa12.9□□□□□ -0.34
GGA2-213ENST00000568922 GRASPQ7Z6J2 395 aaPredicted RBP12.9□□□□□ -0.34
GGA2-213ENST00000568922 CMTM8Q8IZV2 173 aa12.9□□□□□ -0.34
GGA2-213ENST00000568922 IQCKQ8N0W5 287 aa12.9□□□□□ -0.34
GGA2-213ENST00000568922 CPXM2Q8N436 756 aa12.9□□□□□ -0.34
GGA2-213ENST00000568922 MCUQ8NE86 351 aa12.9□□□□□ -0.34
GGA2-213ENST00000568922 HMCESQ96FZ2 354 aa12.9□□□□□ -0.34
GGA2-213ENST00000568922 SFXN1Q9H9B4 322 aa12.9□□□□□ -0.34
GGA2-213ENST00000568922 DZANK1Q9NVP4 752 aa12.9□□□□□ -0.34
GGA2-213ENST00000568922 CFAP97Q9P2B7 532 aa12.9□□□□□ -0.34
GGA2-213ENST00000568922 IPO11Q9UI26 975 aaKnown RBP12.9□□□□□ -0.34
GGA2-213ENST00000568922 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.9□□□□□ -0.34
GGA2-213ENST00000568922 TCRBV7S3A2A0A539 114 aa12.9□□□□□ -0.34
GGA2-213ENST00000568922 LEFTY2O00292 366 aa12.9□□□□□ -0.34
GGA2-213ENST00000568922 APRTP07741 180 aa12.9□□□□□ -0.34
GGA2-213ENST00000568922 CCNB1P14635 433 aa12.9□□□□□ -0.34
GGA2-213ENST00000568922 RPS24P62847 133 aaKnown RBP12.9□□□□□ -0.34
GGA2-213ENST00000568922 CDK16Q00536 496 aa12.9□□□□□ -0.34
GGA2-213ENST00000568922 ZBTB17Q13105 803 aa12.9□□□□□ -0.34
GGA2-213ENST00000568922 CBLBQ13191 982 aa12.9□□□□□ -0.34
GGA2-213ENST00000568922 ZNF177Q13360 481 aaPredicted RBP12.9□□□□□ -0.34
GGA2-213ENST00000568922 SLC5A9Q2M3M2 681 aa12.9□□□□□ -0.34
GGA2-213ENST00000568922 FAXCQ5TGI0 409 aa12.9□□□□□ -0.34
GGA2-213ENST00000568922 LRIG3Q6UXM1 1119 aa12.9□□□□□ -0.34
GGA2-213ENST00000568922 SETD3Q86TU7 594 aaPredicted RBP12.9□□□□□ -0.34
GGA2-213ENST00000568922 HJURPQ8NCD3 748 aaPredicted RBP12.9□□□□□ -0.34
GGA2-213ENST00000568922 ZSCAN18Q8TBC5 510 aaPredicted RBP12.9□□□□□ -0.34
GGA2-213ENST00000568922 SMG7Q92540 1137 aaKnown RBP12.9□□□□□ -0.34
GGA2-213ENST00000568922 MAML1Q92585 1016 aa12.9□□□□□ -0.34
GGA2-213ENST00000568922 TEKT5Q96M29 485 aa12.9□□□□□ -0.34
GGA2-213ENST00000568922 PWWP2AQ96N64 755 aa12.9□□□□□ -0.34
GGA2-213ENST00000568922 RUFY1Q96T51 708 aa12.9□□□□□ -0.34
GGA2-213ENST00000568922 IL12RB2Q99665 862 aa12.9□□□□□ -0.34
GGA2-213ENST00000568922 CEP41Q9BYV8 373 aa12.9□□□□□ -0.34
GGA2-213ENST00000568922 MAGEH1Q9H213 219 aa12.9□□□□□ -0.34
GGA2-213ENST00000568922 CDC42EP4Q9H3Q1 356 aaKnown RBP12.9□□□□□ -0.34
GGA2-213ENST00000568922 SEMA4AQ9H3S1 761 aa12.9□□□□□ -0.34
GGA2-213ENST00000568922 EIF2B3Q9NR50 452 aaKnown RBP12.9□□□□□ -0.34
GGA2-213ENST00000568922 CHD5Q8TDI0 1954 aa12.89□□□□□ -0.35
GGA2-213ENST00000568922 E2F8A0AVK6 867 aa12.89□□□□□ -0.35
GGA2-213ENST00000568922 GOLGA8MH3BSY2 632 aa12.89□□□□□ -0.35
GGA2-213ENST00000568922 GFRA2O00451 464 aa12.89□□□□□ -0.35
GGA2-213ENST00000568922 TRDMT1O14717 391 aaKnown RBP12.89□□□□□ -0.35
GGA2-213ENST00000568922 TSPAN3O60637 253 aa12.89□□□□□ -0.35
GGA2-213ENST00000568922 JCHAINP01591 159 aa12.89□□□□□ -0.35
GGA2-213ENST00000568922 LMAN1P49257 510 aa12.89□□□□□ -0.35
GGA2-213ENST00000568922 NTHL1P78549 312 aa12.89□□□□□ -0.35
GGA2-213ENST00000568922 SARNPP82979 210 aaKnown RBP12.89□□□□□ -0.35
GGA2-213ENST00000568922 IL10RBQ08334 325 aa12.89□□□□□ -0.35
GGA2-213ENST00000568922 DENND2CQ68D51 928 aa12.89□□□□□ -0.35
GGA2-213ENST00000568922 PDIK1LQ8N165 341 aa12.89□□□□□ -0.35
GGA2-213ENST00000568922 SH3RF2Q8TEC5 729 aa12.89□□□□□ -0.35
GGA2-213ENST00000568922 NSMCE1Q8WV22 266 aa12.89□□□□□ -0.35
GGA2-213ENST00000568922 TMA16Q96EY4 203 aaKnown RBP12.89□□□□□ -0.35
GGA2-213ENST00000568922 ZIM3Q96PE6 472 aa12.89□□□□□ -0.35
GGA2-213ENST00000568922 GBA3Q9H227 469 aa12.89□□□□□ -0.35
GGA2-213ENST00000568922 SP110Q9HB58 689 aa12.89□□□□□ -0.35
GGA2-213ENST00000568922 SAYSD1Q9NPB0 183 aa12.89□□□□□ -0.35
GGA2-213ENST00000568922 DNAJC17Q9NVM6 304 aaKnown RBP12.89□□□□□ -0.35
GGA2-213ENST00000568922 FAM53CQ9NYF3 392 aa12.89□□□□□ -0.35
GGA2-213ENST00000568922 RSPH14Q9UHP6 348 aa12.89□□□□□ -0.35
GGA2-213ENST00000568922 PLAAQ9Y263 795 aa12.89□□□□□ -0.35
GGA2-213ENST00000568922 NUP210Q8TEM1 1887 aaPredicted RBP12.88□□□□□ -0.35
GGA2-213ENST00000568922 ILVBLA1L0T0 632 aa12.88□□□□□ -0.35
GGA2-213ENST00000568922 E7ESA3 106 aa12.88□□□□□ -0.35
GGA2-213ENST00000568922 ZBTB24O43167 697 aaPredicted RBP12.88□□□□□ -0.35
GGA2-213ENST00000568922 RIPK2O43353 540 aa12.88□□□□□ -0.35
GGA2-213ENST00000568922 NUDT17P0C025 328 aa12.88□□□□□ -0.35
GGA2-213ENST00000568922 PSMB4P28070 264 aa12.88□□□□□ -0.35
GGA2-213ENST00000568922 MAGEA4P43358 317 aa12.88□□□□□ -0.35
GGA2-213ENST00000568922 RENBPP51606 427 aa12.88□□□□□ -0.35
GGA2-213ENST00000568922 SGSHP51688 502 aa12.88□□□□□ -0.35
GGA2-213ENST00000568922 GNA12Q03113 381 aa12.88□□□□□ -0.35
GGA2-213ENST00000568922 SERINC3Q13530 473 aa12.88□□□□□ -0.35
GGA2-213ENST00000568922 HNRNPDQ14103 355 aaKnown RBP12.88□□□□□ -0.35
GGA2-213ENST00000568922 PRPSAP1Q14558 356 aa12.88□□□□□ -0.35
GGA2-213ENST00000568922 FAM182AQ5T1J6 154 aa12.88□□□□□ -0.35
GGA2-213ENST00000568922 ZNF783Q6ZMS7 281 aa12.88□□□□□ -0.35
GGA2-213ENST00000568922 ZNF354CQ86Y25 554 aa12.88□□□□□ -0.35
GGA2-213ENST00000568922 ARHGEF2Q92974 986 aaKnown RBP12.88□□□□□ -0.35
GGA2-213ENST00000568922 TTC25Q96NG3 672 aa12.88□□□□□ -0.35
GGA2-213ENST00000568922 AGAP3Q96P47 875 aa12.88□□□□□ -0.35
GGA2-213ENST00000568922 PPP1R2P1Q96PQ5 205 aa12.88□□□□□ -0.35
GGA2-213ENST00000568922 EPB41L4BQ9H329 900 aa12.88□□□□□ -0.35
GGA2-213ENST00000568922 TDP1Q9NUW8 608 aa12.88□□□□□ -0.35
GGA2-213ENST00000568922 TBC1D30Q9Y2I9 924 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms