RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 PPP1R2P1Q96PQ5 205 aa14.99□□□□□ -0.01
COMMD4-221ENST00000567935 RETREG1Q9H6L5 497 aa14.99□□□□□ -0.01
COMMD4-221ENST00000567935 ANLNQ9NQW6 1124 aa14.99□□□□□ -0.01
COMMD4-221ENST00000567935 TMPRSS4Q9NRS4 437 aa14.99□□□□□ -0.01
COMMD4-221ENST00000567935 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.99□□□□□ -0.01
COMMD4-221ENST00000567935 DNAJC17Q9NVM6 304 aaKnown RBP14.99□□□□□ -0.01
COMMD4-221ENST00000567935 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.99□□□□□ -0.01
COMMD4-221ENST00000567935 BCCIPQ9P287 314 aaKnown RBP eCLIP14.99□□□□□ -0.01
COMMD4-221ENST00000567935 IGSF9Q9P2J2 1179 aa14.99□□□□□ -0.01
COMMD4-221ENST00000567935 SLC24A2Q9UI40 661 aa14.99□□□□□ -0.01
COMMD4-221ENST00000567935 NOVA2Q9UNW9 492 aaKnown RBP14.99□□□□□ -0.01
COMMD4-221ENST00000567935 SORCS3Q9UPU3 1222 aa14.99□□□□□ -0.01
COMMD4-221ENST00000567935 SSX2IPQ9Y2D8 614 aa14.99□□□□□ -0.01
COMMD4-221ENST00000567935 CEP250Q9BV73 2442 aa14.99□□□□□ -0.01
COMMD4-221ENST00000567935 MAP1BP46821 2468 aaKnown RBP14.99□□□□□ -0.01
COMMD4-221ENST00000567935 CLUHO75153 1309 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 TLDC2A0PJX2 215 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 WDR27A2RRH5 827 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 SLC38A8A6NNN8 435 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 RNF103O00237 685 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 PER2O15055 1255 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 VNN2O95498 520 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 URODP06132 367 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 CSH1P0DML2 217 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 CSH2P0DML3 217 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 OR1D2P34982 312 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 PBX3P40426 434 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 PPP3CCP48454 512 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 CLCN5P51795 746 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 GYS2P54840 703 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 MLLT6P55198 1093 aaPredicted RBP14.98□□□□□ -0.01
COMMD4-221ENST00000567935 USP46P62068 366 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 AP1B1Q10567 949 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 TAF10Q12962 218 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 AUHQ13825 339 aaKnown RBP14.98□□□□□ -0.01
COMMD4-221ENST00000567935 KLHL38Q2WGJ6 581 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 ANKRD20A2Q5SQ80 823 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 ANKRD20A1Q5TYW2 823 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 ANKRD20A3Q5VUR7 823 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 SNX30Q5VWJ9 437 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 ITPRIPL1Q6GPH6 555 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 KLHDC10Q6PID8 442 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 PRSS55Q6UWB4 352 aaPredicted RBP14.98□□□□□ -0.01
COMMD4-221ENST00000567935 SH2D3CQ8N5H7 860 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 TTC9BQ8N6N2 239 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 COLGALT1Q8NBJ5 622 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 CCNYQ8ND76 341 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 ZNF461Q8TAF7 563 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 POF1BQ8WVV4 589 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 P2RY11Q96G91 374 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 FCRL2Q96LA5 508 aaPredicted RBP14.98□□□□□ -0.01
COMMD4-221ENST00000567935 PWWP2AQ96N64 755 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 TSGA13Q96PP4 275 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 CAPS2Q9BXY5 557 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 MFSD1Q9H3U5 465 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 ETNK1Q9HBU6 452 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 LRRC4CQ9HCJ2 640 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.98□□□□□ -0.01
COMMD4-221ENST00000567935 PPARGC1AQ9UBK2 798 aaKnown RBP14.98□□□□□ -0.01
COMMD4-221ENST00000567935 SFMBT1Q9UHJ3 866 aa14.98□□□□□ -0.01
COMMD4-221ENST00000567935 HBS1LQ9Y450 684 aaKnown RBP14.98□□□□□ -0.01
COMMD4-221ENST00000567935 MRPL42Q9Y6G3 142 aaKnown RBP14.98□□□□□ -0.01
COMMD4-221ENST00000567935 CHD6Q8TD26 2715 aa14.97□□□□□ -0.01
COMMD4-221ENST00000567935 KIAA1671Q9BY89 1806 aa14.97□□□□□ -0.01
COMMD4-221ENST00000567935 EXOC1LA0A1B0GW35 172 aa14.97□□□□□ -0.01
COMMD4-221ENST00000567935 ERI2A8K979 691 aaKnown RBP14.97□□□□□ -0.01
COMMD4-221ENST00000567935 PI15O43692 258 aa14.97□□□□□ -0.01
COMMD4-221ENST00000567935 ABLIM3O94929 683 aa14.97□□□□□ -0.01
COMMD4-221ENST00000567935 IGLV3-27P01718 113 aa14.97□□□□□ -0.01
COMMD4-221ENST00000567935 APRTP07741 180 aa14.97□□□□□ -0.01
COMMD4-221ENST00000567935 VAV1P15498 845 aa14.97□□□□□ -0.01
COMMD4-221ENST00000567935 GARSP41250 739 aaKnown RBP14.97□□□□□ -0.01
COMMD4-221ENST00000567935 LMAN1P49257 510 aa14.97□□□□□ -0.01
COMMD4-221ENST00000567935 MAGOHP61326 146 aaKnown RBP14.97□□□□□ -0.01
COMMD4-221ENST00000567935 RAB33AQ14088 237 aa14.97□□□□□ -0.01
COMMD4-221ENST00000567935 VEPH1Q14D04 833 aa14.97□□□□□ -0.01
COMMD4-221ENST00000567935 RSPO4Q2I0M5 234 aaPredicted RBP14.97□□□□□ -0.01
COMMD4-221ENST00000567935 BBS9Q3SYG4 887 aa14.97□□□□□ -0.01
COMMD4-221ENST00000567935 SDHAF4Q5VUM1 108 aa14.97□□□□□ -0.01
COMMD4-221ENST00000567935 NUGGCQ68CJ6 796 aa14.97□□□□□ -0.01
COMMD4-221ENST00000567935 LRRC31Q6UY01 552 aa14.97□□□□□ -0.01
COMMD4-221ENST00000567935 PALM2Q8IXS6 379 aa14.97□□□□□ -0.01
COMMD4-221ENST00000567935 KLHL23Q8NBE8 558 aa14.97□□□□□ -0.01
COMMD4-221ENST00000567935 EPS8L3Q8TE67 593 aaKnown RBP14.97□□□□□ -0.01
COMMD4-221ENST00000567935 BTN2A3PQ96KV6 586 aa14.97□□□□□ -0.01
COMMD4-221ENST00000567935 LGMNQ99538 433 aa14.97□□□□□ -0.01
COMMD4-221ENST00000567935 APOL5Q9BWW9 433 aa14.97□□□□□ -0.01
COMMD4-221ENST00000567935 VN1R3Q9BXE9 311 aa14.97□□□□□ -0.01
COMMD4-221ENST00000567935 S1PR5Q9H228 398 aa14.97□□□□□ -0.01
COMMD4-221ENST00000567935 VPS37BQ9H9H4 285 aa14.97□□□□□ -0.01
COMMD4-221ENST00000567935 OSER1Q9NX31 292 aa14.97□□□□□ -0.01
COMMD4-221ENST00000567935 MARCH2Q9P0N8 246 aa14.97□□□□□ -0.01
COMMD4-221ENST00000567935 CDH22Q9UJ99 828 aa14.97□□□□□ -0.01
COMMD4-221ENST00000567935 SLC27A5Q9Y2P5 690 aa14.97□□□□□ -0.01
COMMD4-221ENST00000567935 MFHAS1Q9Y4C4 1052 aa14.97□□□□□ -0.01
COMMD4-221ENST00000567935 ACTL7BQ9Y614 415 aa14.97□□□□□ -0.01
COMMD4-221ENST00000567935 CHD8Q9HCK8 2581 aa14.96□□□□□ -0.01
COMMD4-221ENST00000567935 FRYLO94915 3013 aa14.96□□□□□ -0.01
COMMD4-221ENST00000567935 TCRBV7S3A2A0A539 114 aa14.96□□□□□ -0.01
COMMD4-221ENST00000567935 GOLGA8MH3BSY2 632 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms