RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	ENDOD1	O94919	500 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	SEMA4F	O95754	770 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	CCDC172	P0C7W6	258 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	SLC8A1	P32418	973 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	FLT3	P36888	993 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	STK19	P49842	368 aa	Predicted RBP	7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	NOVA1	P51513	510 aa	Known RBP	7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	IRAK1	P51617	712 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	GALC	P54803	685 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	KRT83	P78385	493 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	ATP11A	P98196	1134 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	SEMA3B	Q13214	749 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	SLC14A1	Q13336	389 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	DLG2	Q15700	870 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	CST6	Q15828	149 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	ACCSL	Q4AC99	568 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	ANO6	Q4KMQ2	910 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	TRNP1	Q6NT89	227 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	PSAPL1	Q6NUJ1	521 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	CAVIN1	Q6NZI2	390 aa	Known RBP	7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	APTX	Q7Z2E3	356 aa	Known RBP	7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	PHLDB2	Q86SQ0	1253 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	SETD3	Q86TU7	594 aa	Predicted RBP	7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	MMAA	Q8IVH4	418 aa	Known RBP	7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	STK40	Q8N2I9	435 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	MINDY1	Q8N5J2	469 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	OR52K2	Q8NGK3	314 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	C1orf216	Q8TAB5	229 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	FRS2	Q8WU20	508 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	RXFP2	Q8WXD0	754 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	SNX19	Q92543	992 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	PTPRN2	Q92932	1015 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	ALG14	Q96F25	216 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	CFAP57	Q96MR6	1250 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	PCDHB18P	Q96TA0	734 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	AGPAT1	Q99943	283 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	BPIFA3	Q9BQP9	254 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	NEUROG2	Q9H2A3	272 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	SLC32A1	Q9H598	525 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	C6orf106	Q9H6K1	298 aa	Predicted RBP	7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	FSCN3	Q9NQT6	498 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	ANLN	Q9NQW6	1124 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	TMPRSS4	Q9NRS4	437 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	DNAAF2	Q9NVR5	837 aa	Known RBP	7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	ADAM22	Q9P0K1	906 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	ADAMTS1	Q9UHI8	967 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	SLC25A13	Q9UJS0	675 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	VPS28	Q9UK41	221 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	SNX10	Q9Y5X0	201 aa		7.11	□□□□□ -1.27
SF3B3-209	ENST00000567635	PTPRB	P23467	1997 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	IGLV3-10	A0A075B6K4	115 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635		A0A1W2PP55	124 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	LRRC72	A6NJI9	287 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	SIGLEC16	A6NMB1	481 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635		E9PAM4	449 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635		I6L893	689 aa	Predicted RBP	7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	TEX33	O43247	280 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	ATP9B	O43861	1147 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	RNASEH2A	O75792	299 aa	Known RBP	7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	FSBP	O95073	299 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	ADH1B	P00325	375 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	CALB1	P05937	261 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	RHOC	P08134	193 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	KRT3	P12035	628 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	UNG	P13051	313 aa	Predicted RBP	7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	ATP1A3	P13637	1013 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	CD59	P13987	128 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	FER	P16591	822 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	GOT1	P17174	413 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	C5AR1	P21730	350 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	CD27	P26842	260 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	OR1E1	P30953	314 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	SDC4	P31431	198 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	RDX	P35241	583 aa	Known RBP	7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	RFC1	P35251	1148 aa	Predicted RBP	7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	ADRA1B	P35368	520 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	GGCX	P38435	758 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	NSF	P46459	744 aa	Known RBP	7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	CSNK1E	P49674	416 aa	Known RBP	7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	NUMB	P49757	651 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	ZNF165	P49910	485 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	AFF3	P51826	1226 aa	Known RBP	7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	PTP4A2	Q12974	167 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	ELAVL3	Q14576	367 aa	Known RBP	7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	CLEC16A	Q2KHT3	1053 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	SKOR2	Q2VWA4	1001 aa	Predicted RBP	7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	ARL13B	Q3SXY8	428 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	CCDC14	Q49A88	953 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	FILIP1L	Q4L180	1135 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	ALF	Q53S48	1182 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	FAM46C	Q5VWP2	391 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	KIAA0895L	Q68EN5	471 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	IL27RA	Q6UWB1	636 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	BNIPL	Q7Z465	357 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	IRF2BP2	Q7Z5L9	587 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	DSG4	Q86SJ6	1040 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	PIP4P1	Q86T03	277 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	FAM131B	Q86XD5	332 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	PHF13	Q86YI8	300 aa	Predicted RBP	7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	ZNF683	Q8IZ20	524 aa		7.1	□□□□□ -1.27

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