RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 TXNDC11Q6PKC3 985 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 LAYNQ6UX15 382 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 TMC7Q7Z402 723 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 IRF2BP2Q7Z5L9 587 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 NOP9Q86U38 636 aaKnown RBP4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 CLVS1Q8IUQ0 354 aaPredicted RBP4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 PSTKQ8IV42 348 aaKnown RBP4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 SYTL5Q8TDW5 730 aaPredicted RBP4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 CDRT15Q96T59 188 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 SGIP1Q9BQI5 828 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 COLEC11Q9BWP8 271 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 DPY30Q9C005 99 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 PDGFDQ9GZP0 370 aaPredicted RBP4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 TMEM39BQ9GZU3 492 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 WDR41Q9HAD4 459 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 HPS4Q9NQG7 708 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 CHST12Q9NRB3 414 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 RAD18Q9NS91 495 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 KRT84Q9NSB2 600 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 ETNK2Q9NVF9 386 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 LEF1Q9UJU2 399 aaPredicted RBP4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 RPS6KA6Q9UK32 745 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 DNPEPQ9ULA0 475 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 PSMD13Q9UNM6 376 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 SPACA6W5XKT8 324 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 PEAK1Q9H792 1746 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 UMODL1Q5DID0 1318 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 RBM47A0AV96 593 aaKnown RBP4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 PSMD12O00232 456 aaPredicted RBP4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 NR5A2O00482 541 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 PMM2O15305 246 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 RGS14O43566 566 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 MGRN1O60291 552 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 AP1G2O75843 785 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 FARP2O94887 1054 aaPredicted RBP4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 MLYCDO95822 493 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 ARP10275 920 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 UQCRBP14927 111 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 BMP6P22004 513 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 PPP2R1BP30154 601 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 GRK4P32298 578 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 HTR7P34969 479 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 FAAP100Q0VG06 881 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 TRAF3Q13114 568 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 BLMHQ13867 455 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 C16orf72Q14CZ0 275 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 FAM187BQ17R55 369 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 FBXO47Q5MNV8 452 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 PPP1R15BQ5SWA1 713 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 MARC1Q5VT66 337 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 METTL3Q86U44 580 aaKnown RBP4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 PROSER1Q86XN7 944 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 DEPDC4Q8N2C3 294 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 FBXW8Q8N3Y1 598 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 FBXO39Q8N4B4 442 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 VGLL2Q8N8G2 317 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 RFWD2Q8NHY2 731 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 USP33Q8TEY7 942 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 SERPINB11Q96P15 392 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 PANX3Q96QZ0 392 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 PPP1R16BQ96T49 567 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 APBA2Q99767 749 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 IL17RBQ9NRM6 502 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 KLHL28Q9NXS3 571 aa4.43□□□□□ -1.7
LPCAT2-208ENST00000566915 ZSCAN5CA6NGD5 496 aaPredicted RBP4.42□□□□□ -1.7
LPCAT2-208ENST00000566915 BMP10O95393 424 aa4.42□□□□□ -1.7
LPCAT2-208ENST00000566915 CBX6O95503 412 aa4.42□□□□□ -1.7
LPCAT2-208ENST00000566915 GUCA1CO95843 209 aa4.42□□□□□ -1.7
LPCAT2-208ENST00000566915 PROCP04070 461 aa4.42□□□□□ -1.7
LPCAT2-208ENST00000566915 SNRPB2P08579 225 aaKnown RBP4.42□□□□□ -1.7
LPCAT2-208ENST00000566915 COX4I1P13073 169 aa4.42□□□□□ -1.7
LPCAT2-208ENST00000566915 ZNF7P17097 686 aaPredicted RBP4.42□□□□□ -1.7
LPCAT2-208ENST00000566915 VCLP18206 1134 aa4.42□□□□□ -1.7
LPCAT2-208ENST00000566915 ATP6V1B2P21281 511 aa4.42□□□□□ -1.7
LPCAT2-208ENST00000566915 PPIBP23284 216 aaKnown RBP4.42□□□□□ -1.7
LPCAT2-208ENST00000566915 PAX7P23759 505 aa4.42□□□□□ -1.7
LPCAT2-208ENST00000566915 SSTR1P30872 391 aa4.42□□□□□ -1.7
LPCAT2-208ENST00000566915 IL12RB1P42701 662 aa4.42□□□□□ -1.7
LPCAT2-208ENST00000566915 ATXN3P54252 364 aaPredicted RBP4.42□□□□□ -1.7
LPCAT2-208ENST00000566915 CDK18Q07002 472 aa4.42□□□□□ -1.7
LPCAT2-208ENST00000566915 SPIRE1Q08AE8 756 aa4.42□□□□□ -1.7
LPCAT2-208ENST00000566915 PSMD5Q16401 504 aa4.42□□□□□ -1.7
LPCAT2-208ENST00000566915 EPC2Q52LR7 807 aa4.42□□□□□ -1.7
LPCAT2-208ENST00000566915 NOL9Q5SY16 702 aaKnown RBP4.42□□□□□ -1.7
LPCAT2-208ENST00000566915 KHDRBS2Q5VWX1 349 aaKnown RBP4.42□□□□□ -1.7
LPCAT2-208ENST00000566915 FAM92BQ6ZTR7 304 aa4.42□□□□□ -1.7
LPCAT2-208ENST00000566915 SNX32Q86XE0 403 aa4.42□□□□□ -1.7
LPCAT2-208ENST00000566915 PTCD2Q8WV60 388 aaKnown RBP4.42□□□□□ -1.7
LPCAT2-208ENST00000566915 NKD2Q969F2 451 aaPredicted RBP4.42□□□□□ -1.7
LPCAT2-208ENST00000566915 TLCD1Q96CP7 247 aa4.42□□□□□ -1.7
LPCAT2-208ENST00000566915 MTERF3Q96E29 417 aa4.42□□□□□ -1.7
LPCAT2-208ENST00000566915 Q96MT0 163 aa4.42□□□□□ -1.7
LPCAT2-208ENST00000566915 TCF12Q99081 682 aa4.42□□□□□ -1.7
LPCAT2-208ENST00000566915 EBNA1BP2Q99848 306 aaKnown RBP4.42□□□□□ -1.7
LPCAT2-208ENST00000566915 MRPL57Q9BQC6 102 aaKnown RBP4.42□□□□□ -1.7
LPCAT2-208ENST00000566915 MUC3BQ9H195 1237 aa4.42□□□□□ -1.7
LPCAT2-208ENST00000566915 CLK4Q9HAZ1 481 aaKnown RBP4.42□□□□□ -1.7
LPCAT2-208ENST00000566915 VPS45Q9NRW7 570 aa4.42□□□□□ -1.7
LPCAT2-208ENST00000566915 MFHAS1Q9Y4C4 1052 aa4.42□□□□□ -1.7
LPCAT2-208ENST00000566915 COL18A1P39060 1754 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms