RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 UGT1A9O60656 530 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 FTLP02792 175 aaPredicted RBP2.97□□□□□ -1.93
CHD9-218ENST00000566029 KITP10721 976 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 UGT1A6P19224 532 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 UGT1A1P22309 533 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 UGT1A4P22310 534 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 UGT1A3P35503 534 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 UGT1A5P35504 534 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 CASP4P49662 377 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 DNAAF3Q8N9W5 541 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 CMASQ8NFW8 434 aaPredicted RBP2.97□□□□□ -1.93
CHD9-218ENST00000566029 RPLP0P6Q8NHW5 317 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 ZNF420Q8TAQ5 688 aaPredicted RBP2.97□□□□□ -1.93
CHD9-218ENST00000566029 ZNF285Q96NJ3 590 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 ZNF347Q96SE7 839 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 SLC9A7Q96T83 725 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 UGT1A7Q9HAW7 530 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 UGT1A10Q9HAW8 530 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 UGT1A8Q9HAW9 530 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 CD209Q9NNX6 404 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 ATPIF1Q9UII2 106 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 GPSM3Q9Y4H4 160 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 A8MU76 341 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 C19orf81C9J6K1 198 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 SNNO75324 88 aaPredicted RBP2.97□□□□□ -1.93
CHD9-218ENST00000566029 LYPLA1O75608 230 aaPredicted RBP2.97□□□□□ -1.93
CHD9-218ENST00000566029 XRCC5P13010 732 aaKnown RBP2.97□□□□□ -1.93
CHD9-218ENST00000566029 NPR1P16066 1061 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 YWHAGP61981 247 aaKnown RBP eCLIP2.97□□□□□ -1.93
CHD9-218ENST00000566029 ZNF200P98182 395 aaPredicted RBP2.97□□□□□ -1.93
CHD9-218ENST00000566029 DRAP1Q14919 205 aaPredicted RBP2.97□□□□□ -1.93
CHD9-218ENST00000566029 WDR44Q5JSH3 913 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 FGD3Q5JSP0 725 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 ANKRD22Q5VYY1 191 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 DCAF15Q66K64 600 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 FAM122CQ6P4D5 195 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 ABRAXAS1Q6UWZ7 409 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 C4orf22Q6V702 233 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 SLC51BQ86UW2 128 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 NLRP10Q86W26 655 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 CAMK1DQ8IU85 385 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 LACC1Q8IV20 430 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 HERC6Q8IVU3 1022 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 SETD6Q8TBK2 473 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 PYDC1Q8WXC3 89 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 APBB2Q92870 758 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 ABI2Q9NYB9 513 aaPredicted RBP2.97□□□□□ -1.93
CHD9-218ENST00000566029 KIAA1257Q9ULG3 409 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 TMCC3Q9ULS5 477 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 PLIN4Q96Q06 1357 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 TSPAN4O14817 238 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 BMP3P12645 472 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 SLC1A1P43005 524 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 CLK2P49760 499 aaKnown RBP2.97□□□□□ -1.93
CHD9-218ENST00000566029 IFITM3Q01628 133 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 RAPSNQ13702 412 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 BBS9Q3SYG4 887 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 CCDC58Q4VC31 144 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 LGSNQ5TDP6 509 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 SLC16A12Q6ZSM3 486 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 RASSF5Q8WWW0 418 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 CCDC124Q96CT7 223 aaKnown RBP2.97□□□□□ -1.93
CHD9-218ENST00000566029 C1QTNF7Q9BXJ2 289 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 FBXO6Q9NRD1 293 aaPredicted RBP2.97□□□□□ -1.93
CHD9-218ENST00000566029 DNAJC28Q9NX36 388 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 KCND2Q9NZV8 630 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 TXNDC16Q9P2K2 825 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 TNS3Q68CZ2 1445 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 LOC100509620A0A075B734 347 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 CYP2D7A0A087X1C5 515 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 CLRN2A0PK11 232 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 GPR25O00155 361 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 EIF2AK2P19525 551 aaKnown RBP2.97□□□□□ -1.93
CHD9-218ENST00000566029 IL4RP24394 825 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 TTKP33981 857 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 SCRN3Q0VDG4 424 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 PDIA2Q13087 525 aaKnown RBP2.97□□□□□ -1.93
CHD9-218ENST00000566029 SBK1Q52WX2 424 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 PAOXQ6QHF9 649 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 CYP4V2Q6ZWL3 525 aaPredicted RBP2.97□□□□□ -1.93
CHD9-218ENST00000566029 ZBTB33Q86T24 672 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 CCDC60Q8IWA6 550 aaPredicted RBP2.97□□□□□ -1.93
CHD9-218ENST00000566029 DTX3Q8N9I9 347 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 GOLM1Q8NBJ4 401 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 PHF10Q8WUB8 498 aaKnown RBP2.97□□□□□ -1.93
CHD9-218ENST00000566029 RNF170Q96K19 258 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 CDK5RAP1Q96SZ6 601 aaKnown RBP2.97□□□□□ -1.93
CHD9-218ENST00000566029 TRIM56Q9BRZ2 755 aaKnown RBP2.97□□□□□ -1.93
CHD9-218ENST00000566029 RAD21L1Q9H4I0 556 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 PNPLA8Q9NP80 782 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 AFF4Q9UHB7 1163 aaKnown RBP2.97□□□□□ -1.93
CHD9-218ENST00000566029 SNX5Q9Y5X3 404 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 PIK3C2AO00443 1686 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 ACSL4O60488 711 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 SH3BGRLO75368 114 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 AOC1P19801 751 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 CSTF2P33240 577 aaKnown RBP eCLIP2.97□□□□□ -1.932e-6■□□□□ 10.4
CHD9-218ENST00000566029 GRIA3P42263 894 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 GNG2P59768 71 aa2.97□□□□□ -1.93
CHD9-218ENST00000566029 PRKCQQ04759 706 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms