RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 CCDC117Q8IWD4 279 aaPredicted RBP13.17□□□□□ -0.3
RNF40-208ENST00000565995 CFAP52Q8N1V2 620 aa13.17□□□□□ -0.3
RNF40-208ENST00000565995 CLEC4CQ8WTT0 213 aa13.17□□□□□ -0.3
RNF40-208ENST00000565995 RPL10LQ96L21 214 aaKnown RBP13.17□□□□□ -0.3
RNF40-208ENST00000565995 ZSWIM1Q9BR11 485 aa13.17□□□□□ -0.3
RNF40-208ENST00000565995 DPH1Q9BZG8 443 aa13.17□□□□□ -0.3
RNF40-208ENST00000565995 MAPK8IP1Q9UQF2 711 aa13.17□□□□□ -0.3
RNF40-208ENST00000565995 HECTD1Q9ULT8 2610 aa13.17□□□□□ -0.3
RNF40-208ENST00000565995 LRRK1Q38SD2 2015 aa13.17□□□□□ -0.3
RNF40-208ENST00000565995 PTPN13Q12923 2485 aa13.16□□□□□ -0.3
RNF40-208ENST00000565995 CETN3O15182 167 aa13.16□□□□□ -0.3
RNF40-208ENST00000565995 ALOX15BO15296 676 aa13.16□□□□□ -0.3
RNF40-208ENST00000565995 RTN2O75298 545 aa13.16□□□□□ -0.3
RNF40-208ENST00000565995 PRR29P0C7W0 189 aa13.16□□□□□ -0.3
RNF40-208ENST00000565995 CD19P15391 556 aa13.16□□□□□ -0.3
RNF40-208ENST00000565995 DGKAP23743 735 aa13.16□□□□□ -0.3
RNF40-208ENST00000565995 NNMTP40261 264 aa13.16□□□□□ -0.3
RNF40-208ENST00000565995 SETMARQ53H47 684 aaPredicted RBP13.16□□□□□ -0.3
RNF40-208ENST00000565995 AGBL4Q5VU57 503 aa13.16□□□□□ -0.3
RNF40-208ENST00000565995 BROXQ5VW32 411 aa13.16□□□□□ -0.3
RNF40-208ENST00000565995 KDM7AQ6ZMT4 941 aa13.16□□□□□ -0.3
RNF40-208ENST00000565995 FAM181AQ8N9Y4 354 aa13.16□□□□□ -0.3
RNF40-208ENST00000565995 TMEM145Q8NBT3 493 aa13.16□□□□□ -0.3
RNF40-208ENST00000565995 DQX1Q8TE96 717 aaKnown RBP13.16□□□□□ -0.3
RNF40-208ENST00000565995 TTC9Q92623 222 aa13.16□□□□□ -0.3
RNF40-208ENST00000565995 IFT43Q96FT9 208 aa13.16□□□□□ -0.3
RNF40-208ENST00000565995 KLHDC7BQ96G42 594 aa13.16□□□□□ -0.3
RNF40-208ENST00000565995 LGMNQ99538 433 aa13.16□□□□□ -0.3
RNF40-208ENST00000565995 KLHL11Q9NVR0 708 aa13.16□□□□□ -0.3
RNF40-208ENST00000565995 SARDHQ9UL12 918 aa13.16□□□□□ -0.3
RNF40-208ENST00000565995 PPM1HQ9ULR3 514 aa13.16□□□□□ -0.3
RNF40-208ENST00000565995 PCDHB1Q9Y5F3 818 aa13.16□□□□□ -0.3
RNF40-208ENST00000565995 COL12A1Q99715 3063 aa13.16□□□□□ -0.3
RNF40-208ENST00000565995 BSNQ9UPA5 3926 aa13.15□□□□□ -0.3
RNF40-208ENST00000565995 UNC13CQ8NB66 2214 aa13.15□□□□□ -0.3
RNF40-208ENST00000565995 B8ZZF3 427 aa13.15□□□□□ -0.3
RNF40-208ENST00000565995 RNF225M0QZC1 329 aaPredicted RBP13.15□□□□□ -0.3
RNF40-208ENST00000565995 MCF2LO15068 1137 aa13.15□□□□□ -0.3
RNF40-208ENST00000565995 PMM2O15305 246 aa13.15□□□□□ -0.3
RNF40-208ENST00000565995 ATP9BO43861 1147 aa13.15□□□□□ -0.3
RNF40-208ENST00000565995 OPA1O60313 960 aa13.15□□□□□ -0.3
RNF40-208ENST00000565995 IGLV3-25P01717 112 aa13.15□□□□□ -0.3
RNF40-208ENST00000565995 EPB41P11171 864 aaKnown RBP13.15□□□□□ -0.3
RNF40-208ENST00000565995 RGS7P49802 495 aa13.15□□□□□ -0.3
RNF40-208ENST00000565995 STK19P49842 368 aaPredicted RBP13.15□□□□□ -0.3
RNF40-208ENST00000565995 METAP1P53582 386 aa13.15□□□□□ -0.3
RNF40-208ENST00000565995 SKOR1P84550 965 aa13.15□□□□□ -0.3
RNF40-208ENST00000565995 KCNMA1Q12791 1236 aa13.15□□□□□ -0.3
RNF40-208ENST00000565995 FAM46CQ5VWP2 391 aa13.15□□□□□ -0.3
RNF40-208ENST00000565995 RNF219Q5W0B1 726 aaPredicted RBP13.15□□□□□ -0.3
RNF40-208ENST00000565995 NEK5Q6P3R8 708 aa13.15□□□□□ -0.3
RNF40-208ENST00000565995 DSG4Q86SJ6 1040 aa13.15□□□□□ -0.3
RNF40-208ENST00000565995 ALG14Q96F25 216 aa13.15□□□□□ -0.3
RNF40-208ENST00000565995 PRMT1Q99873 361 aaKnown RBP13.15□□□□□ -0.3
RNF40-208ENST00000565995 POLR1BQ9H9Y6 1135 aa13.15□□□□□ -0.3
RNF40-208ENST00000565995 USP29Q9HBJ7 922 aa13.15□□□□□ -0.3
RNF40-208ENST00000565995 PREBQ9HCU5 417 aa13.15□□□□□ -0.3
RNF40-208ENST00000565995 ASCL3Q9NQ33 180 aa13.15□□□□□ -0.3
RNF40-208ENST00000565995 LRP4O75096 1905 aa13.14□□□□□ -0.31
RNF40-208ENST00000565995 LY6G6EA0A0G2JKS1 128 aa13.14□□□□□ -0.31
RNF40-208ENST00000565995 CYSRT1A8MQ03 144 aa13.14□□□□□ -0.31
RNF40-208ENST00000565995 GOLGA6L22H0YM25 854 aa13.14□□□□□ -0.31
RNF40-208ENST00000565995 RIOK3O14730 519 aaKnown RBP13.14□□□□□ -0.31
RNF40-208ENST00000565995 SLC16A3O15427 465 aaKnown RBP13.14□□□□□ -0.31
RNF40-208ENST00000565995 VAV1P15498 845 aa13.14□□□□□ -0.31
RNF40-208ENST00000565995 TACR2P21452 398 aa13.14□□□□□ -0.31
RNF40-208ENST00000565995 MAT2AP31153 395 aaKnown RBP13.14□□□□□ -0.31
RNF40-208ENST00000565995 SYKP43405 635 aa13.14□□□□□ -0.31
RNF40-208ENST00000565995 TAS2R38P59533 333 aa13.14□□□□□ -0.31
RNF40-208ENST00000565995 CNTN1Q12860 1018 aa13.14□□□□□ -0.31
RNF40-208ENST00000565995 COBLL1Q53SF7 1204 aa13.14□□□□□ -0.31
RNF40-208ENST00000565995 TAF1BQ53T94 588 aaPredicted RBP13.14□□□□□ -0.31
RNF40-208ENST00000565995 TTC39BQ5VTQ0 682 aaPredicted RBP13.14□□□□□ -0.31
RNF40-208ENST00000565995 LGI2Q8N0V4 545 aa13.14□□□□□ -0.31
RNF40-208ENST00000565995 FAM174AQ8TBP5 190 aa13.14□□□□□ -0.31
RNF40-208ENST00000565995 OR8D1Q8WZ84 308 aa13.14□□□□□ -0.31
RNF40-208ENST00000565995 ERCC4Q92889 916 aaPredicted RBP13.14□□□□□ -0.31
RNF40-208ENST00000565995 SLC35C1Q96A29 364 aa13.14□□□□□ -0.31
RNF40-208ENST00000565995 GRAMD1AQ96CP6 724 aa13.14□□□□□ -0.31
RNF40-208ENST00000565995 BTN2A3PQ96KV6 586 aa13.14□□□□□ -0.31
RNF40-208ENST00000565995 SPATA32Q96LK8 384 aa13.14□□□□□ -0.31
RNF40-208ENST00000565995 DEPDC7Q96QD5 511 aa13.14□□□□□ -0.31
RNF40-208ENST00000565995 PPP1R9BQ96SB3 815 aa13.14□□□□□ -0.31
RNF40-208ENST00000565995 SEMA4CQ9C0C4 833 aa13.14□□□□□ -0.31
RNF40-208ENST00000565995 CPNE5Q9HCH3 593 aa13.14□□□□□ -0.31
RNF40-208ENST00000565995 UCKL1Q9NWZ5 548 aa13.14□□□□□ -0.31
RNF40-208ENST00000565995 TJP2Q9UDY2 1190 aa13.14□□□□□ -0.31
RNF40-208ENST00000565995 XPO7Q9UIA9 1087 aaKnown RBP13.14□□□□□ -0.31
RNF40-208ENST00000565995 NAALADL1Q9UQQ1 740 aa13.14□□□□□ -0.31
RNF40-208ENST00000565995 U3KQA8 63 aa13.14□□□□□ -0.31
RNF40-208ENST00000565995 A0A1B0GVM2 712 aa13.13□□□□□ -0.31
RNF40-208ENST00000565995 KCNU1A8MYU2 1149 aa13.13□□□□□ -0.31
RNF40-208ENST00000565995 PIK3R2O00459 728 aa13.13□□□□□ -0.31
RNF40-208ENST00000565995 SART1O43290 800 aaKnown RBP13.13□□□□□ -0.31
RNF40-208ENST00000565995 SDC3O75056 442 aa13.13□□□□□ -0.31
RNF40-208ENST00000565995 USP12O75317 370 aa13.13□□□□□ -0.31
RNF40-208ENST00000565995 MPOP05164 745 aa13.13□□□□□ -0.31
RNF40-208ENST00000565995 THEGLP0DJG4 465 aa13.13□□□□□ -0.31
RNF40-208ENST00000565995 C6P13671 934 aa13.13□□□□□ -0.31
RNF40-208ENST00000565995 GPD2P43304 727 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms