RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 NAA35Q5VZE5 725 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 SMYD5Q6GMV2 418 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 CXorf57Q6NSI4 855 aaKnown RBP6.59□□□□□ -1.35
TCF4-228ENST00000565393 DBX2Q6ZNG2 339 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 RAB44Q7Z6P3 723 aaPredicted RBP6.59□□□□□ -1.35
TCF4-228ENST00000565393 AADATQ8N5Z0 425 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 KDF1Q8NAX2 398 aaPredicted RBP6.59□□□□□ -1.35
TCF4-228ENST00000565393 ZNF397Q8NF99 534 aaPredicted RBP6.59□□□□□ -1.35
TCF4-228ENST00000565393 OR52K2Q8NGK3 314 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 ENOX1Q8TC92 643 aaKnown RBP6.59□□□□□ -1.35
TCF4-228ENST00000565393 FRS2Q8WU20 508 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 ADAMTS14Q8WXS8 1223 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 ZCCHC14Q8WYQ9 949 aaKnown RBP6.59□□□□□ -1.35
TCF4-228ENST00000565393 ALG14Q96F25 216 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 C1orf74Q96LT6 269 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 SLC6A18Q96N87 628 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 SPAG5Q96R06 1193 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 TBCBQ99426 244 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 NPY6RQ99463 290 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 EBF2Q9HAK2 575 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 TMPRSS4Q9NRS4 437 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 FANCLQ9NW38 375 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 TMEM51Q9NW97 253 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 ARHGEF38Q9NXL2 777 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 MPP6Q9NZW5 540 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 ADAMTS1Q9UHI8 967 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 PPM1HQ9ULR3 514 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 FZD4Q9ULV1 537 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 BTBD3Q9Y2F9 522 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 TBC1D30Q9Y2I9 924 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 PCDHGB2Q9Y5G2 931 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 SNX10Q9Y5X0 201 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 FHOD1Q9Y613 1164 aa6.59□□□□□ -1.35
TCF4-228ENST00000565393 GVINP1Q7Z2Y8 2422 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 ITIH6Q6UXX5 1313 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 ATG2BQ96BY7 2078 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 FAM221BA6H8Z2 402 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 C1QTNF3-AMACRE9PGA6 284 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 K7ERQ8 282 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 TLR4O00206 839 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 CBX4O00257 560 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 KPNA3O00505 521 aaPredicted RBP6.58□□□□□ -1.36
TCF4-228ENST00000565393 WNT9AO14904 365 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 MCF2LO15068 1137 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 TNFSF14O43557 240 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 ATP9BO43861 1147 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 SNAP91O60641 907 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 LDOC1O95751 146 aaPredicted RBP6.58□□□□□ -1.36
TCF4-228ENST00000565393 LSM8O95777 96 aaKnown RBP6.58□□□□□ -1.36
TCF4-228ENST00000565393 MT-CO1P00395 513 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 WNT1P04628 370 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 C7P10643 843 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 CHRNA3P32297 505 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 STAT1P42224 750 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 CTSKP43235 329 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 GRK6P43250 576 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 GABRB2P47870 512 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 KLK7P49862 253 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 CCT8P50990 548 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 METAP1P53582 386 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 ATP11AP98196 1134 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 SCAPQ12770 1279 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 SYCP1Q15431 976 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 ARL13BQ3SXY8 428 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 ALFQ53S48 1182 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 ARSIQ5FYB1 569 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 C6orf118Q5T5N4 469 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 ACBD5Q5T8D3 534 aaPredicted RBP6.58□□□□□ -1.36
TCF4-228ENST00000565393 DPY19L2P1Q6NXN4 242 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 LINGO4Q6UY18 593 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 CCNI2Q6ZMN8 369 aaPredicted RBP6.58□□□□□ -1.36
TCF4-228ENST00000565393 Q6ZVU0 165 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 TFAP2DQ7Z6R9 452 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 GLRX5Q86SX6 157 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 NOP9Q86U38 636 aaKnown RBP6.58□□□□□ -1.36
TCF4-228ENST00000565393 XYLT1Q86Y38 959 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 GATAD2AQ86YP4 633 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 SH2D3CQ8N5H7 860 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 EID2Q8N6I1 236 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 ANKRD20A12PQ8NF67 263 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 SLC30A5Q8TAD4 765 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 PIP4K2CQ8TBX8 421 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 KLK6Q92876 244 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 GATA6Q92908 595 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 CCDC114Q96M63 670 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 CFAP57Q96MR6 1250 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 HAPLN3Q96S86 360 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 ELF4Q99607 663 aaPredicted RBP6.58□□□□□ -1.36
TCF4-228ENST00000565393 ORAI3Q9BRQ5 295 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 C2orf49Q9BVC5 232 aaPredicted RBP6.58□□□□□ -1.36
TCF4-228ENST00000565393 KDM4CQ9H3R0 1056 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 NLRC4Q9NPP4 1024 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 ANLNQ9NQW6 1124 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 DYRK4Q9NR20 520 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 GDF3Q9NR23 364 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 FAM207AQ9NSI2 230 aaPredicted RBP6.58□□□□□ -1.36
TCF4-228ENST00000565393 LMBRD1Q9NUN5 540 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 SARDHQ9UL12 918 aa6.58□□□□□ -1.36
TCF4-228ENST00000565393 TPX2Q9ULW0 747 aaKnown RBP6.58□□□□□ -1.36
TCF4-228ENST00000565393 OR51B4Q9Y5P0 310 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms