RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 RWDD4Q6NW29 188 aaKnown RBP26.65■■□□□ 1.86
NME3-208ENST00000565379 SETD3Q86TU7 594 aaPredicted RBP26.65■■□□□ 1.86
NME3-208ENST00000565379 NT5DC3Q86UY8 548 aa26.65■■□□□ 1.86
NME3-208ENST00000565379 FAM72BQ86X60 149 aa26.65■■□□□ 1.86
NME3-208ENST00000565379 CPNE8Q86YQ8 564 aa26.65■■□□□ 1.86
NME3-208ENST00000565379 CCAR2Q8N163 923 aaKnown RBP26.65■■□□□ 1.86
NME3-208ENST00000565379 CFAP52Q8N1V2 620 aa26.65■■□□□ 1.86
NME3-208ENST00000565379 BHMTQ93088 406 aa26.65■■□□□ 1.86
NME3-208ENST00000565379 MYEOVQ96EZ4 313 aa26.65■■□□□ 1.86
NME3-208ENST00000565379 PNKPQ96T60 521 aa26.65■■□□□ 1.86
NME3-208ENST00000565379 DNAJC17Q9NVM6 304 aaKnown RBP26.65■■□□□ 1.86
NME3-208ENST00000565379 SLC27A6Q9Y2P4 619 aa26.65■■□□□ 1.86
NME3-208ENST00000565379 HYOU1Q9Y4L1 999 aa26.65■■□□□ 1.86
NME3-208ENST00000565379 WASH4PA8MWX3 477 aa26.64■■□□□ 1.86
NME3-208ENST00000565379 ZNF487B1APH4 448 aa26.64■■□□□ 1.86
NME3-208ENST00000565379 H0Y626 953 aa26.64■■□□□ 1.86
NME3-208ENST00000565379 CTNNA2P26232 953 aa26.64■■□□□ 1.86
NME3-208ENST00000565379 CNR2P34972 360 aa26.64■■□□□ 1.86
NME3-208ENST00000565379 CTNNA1P35221 906 aaKnown RBP26.64■■□□□ 1.86
NME3-208ENST00000565379 GJC1P36383 396 aa26.64■■□□□ 1.86
NME3-208ENST00000565379 MAPKAPK2P49137 400 aa26.64■■□□□ 1.86
NME3-208ENST00000565379 SPEM2Q0P670 501 aa26.64■■□□□ 1.86
NME3-208ENST00000565379 SLC12A1Q13621 1099 aa26.64■■□□□ 1.86
NME3-208ENST00000565379 DMC1Q14565 340 aa26.64■■□□□ 1.86
NME3-208ENST00000565379 FBXO43Q4G163 708 aa26.64■■□□□ 1.86
NME3-208ENST00000565379 GRAMD4Q6IC98 578 aa26.64■■□□□ 1.86
NME3-208ENST00000565379 CARNMT1Q8N4J0 409 aa26.64■■□□□ 1.86
NME3-208ENST00000565379 CCDC33Q8N5R6 958 aa26.64■■□□□ 1.86
NME3-208ENST00000565379 CCDC26Q8TAB7 109 aa26.64■■□□□ 1.86
NME3-208ENST00000565379 USP33Q8TEY7 942 aa26.64■■□□□ 1.86
NME3-208ENST00000565379 ZNF670Q9BS34 389 aa26.64■■□□□ 1.86
NME3-208ENST00000565379 GOLPH3Q9H4A6 298 aa26.64■■□□□ 1.86
NME3-208ENST00000565379 PRDM16Q9HAZ2 1276 aa26.64■■□□□ 1.86
NME3-208ENST00000565379 PCDH18Q9HCL0 1135 aa26.64■■□□□ 1.86
NME3-208ENST00000565379 TMEM248Q9NWD8 314 aa26.64■■□□□ 1.86
NME3-208ENST00000565379 CDV3Q9UKY7 258 aaKnown RBP26.64■■□□□ 1.86
NME3-208ENST00000565379 PCDHA3Q9Y5H8 950 aa26.64■■□□□ 1.86
NME3-208ENST00000565379 TRIM24O15164 1050 aa26.63■■□□□ 1.85
NME3-208ENST00000565379 DAPK3O43293 454 aa26.63■■□□□ 1.85
NME3-208ENST00000565379 ATG13O75143 517 aa26.63■■□□□ 1.85
NME3-208ENST00000565379 HNRNPLP14866 589 aaKnown RBP eCLIP26.63■■□□□ 1.85
NME3-208ENST00000565379 ARSEP51690 589 aa26.63■■□□□ 1.85
NME3-208ENST00000565379 ARTNQ5T4W7 220 aa26.63■■□□□ 1.85
NME3-208ENST00000565379 C6orf118Q5T5N4 469 aa26.63■■□□□ 1.85
NME3-208ENST00000565379 EMC10Q5UCC4 262 aa26.63■■□□□ 1.85
NME3-208ENST00000565379 ZNF783Q6ZMS7 281 aa26.63■■□□□ 1.85
NME3-208ENST00000565379 RFX8Q6ZV50 586 aa26.63■■□□□ 1.85
NME3-208ENST00000565379 CEP68Q76N32 757 aa26.63■■□□□ 1.85
NME3-208ENST00000565379 KATNAL2Q8IYT4 538 aa26.63■■□□□ 1.85
NME3-208ENST00000565379 FAM160A2Q8N612 972 aaPredicted RBP26.63■■□□□ 1.85
NME3-208ENST00000565379 UBL4BQ8N7F7 174 aa26.63■■□□□ 1.85
NME3-208ENST00000565379 NAT16Q8N8M0 369 aa26.63■■□□□ 1.85
NME3-208ENST00000565379 MAGEB5Q9BZ81 275 aa26.63■■□□□ 1.85
NME3-208ENST00000565379 TRMT1Q9NXH9 659 aaKnown RBP26.63■■□□□ 1.85
NME3-208ENST00000565379 KIAA1522Q9P206 1035 aaPredicted RBP26.63■■□□□ 1.85
NME3-208ENST00000565379 NEU3Q9UQ49 428 aa26.63■■□□□ 1.85
NME3-208ENST00000565379 TBC1D30Q9Y2I9 924 aa26.63■■□□□ 1.85
NME3-208ENST00000565379 SPAG17Q6Q759 2223 aa26.63■■□□□ 1.85
NME3-208ENST00000565379 A0A0A0MRY4 1105 aa26.62■■□□□ 1.85
NME3-208ENST00000565379 APODP05090 189 aa26.62■■□□□ 1.85
NME3-208ENST00000565379 RETP07949 1114 aa26.62■■□□□ 1.85
NME3-208ENST00000565379 CISD3P0C7P0 127 aa26.62■■□□□ 1.85
NME3-208ENST00000565379 KDELR1P24390 212 aa26.62■■□□□ 1.85
NME3-208ENST00000565379 GRIA2P42262 883 aa26.62■■□□□ 1.85
NME3-208ENST00000565379 E2F5Q15329 346 aa26.62■■□□□ 1.85
NME3-208ENST00000565379 ALFQ53S48 1182 aa26.62■■□□□ 1.85
NME3-208ENST00000565379 NLRP14Q86W24 1093 aa26.62■■□□□ 1.85
NME3-208ENST00000565379 RCOR2Q8IZ40 523 aa26.62■■□□□ 1.85
NME3-208ENST00000565379 PHTF2Q8N3S3 785 aa26.62■■□□□ 1.85
NME3-208ENST00000565379 DDX51Q8N8A6 666 aaKnown RBP eCLIP26.62■■□□□ 1.85
NME3-208ENST00000565379 WFIKKN2Q8TEU8 576 aa26.62■■□□□ 1.85
NME3-208ENST00000565379 P2RY11Q96G91 374 aa26.62■■□□□ 1.85
NME3-208ENST00000565379 ARHGEF4Q9NR80 690 aa26.62■■□□□ 1.85
NME3-208ENST00000565379 MPP6Q9NZW5 540 aa26.62■■□□□ 1.85
NME3-208ENST00000565379 CWC15Q9P013 229 aaKnown RBP26.62■■□□□ 1.85
NME3-208ENST00000565379 KIF5CO60282 957 aa26.61■■□□□ 1.85
NME3-208ENST00000565379 LRP3O75074 770 aa26.61■■□□□ 1.85
NME3-208ENST00000565379 CNTN5O94779 1100 aa26.61■■□□□ 1.85
NME3-208ENST00000565379 TNNT1P13805 278 aa26.61■■□□□ 1.85
NME3-208ENST00000565379 GOT1P17174 413 aa26.61■■□□□ 1.85
NME3-208ENST00000565379 OR1E1P30953 314 aa26.61■■□□□ 1.85
NME3-208ENST00000565379 ATP13A4Q4VNC1 1196 aa26.61■■□□□ 1.85
NME3-208ENST00000565379 SYT13Q7L8C5 426 aa26.61■■□□□ 1.85
NME3-208ENST00000565379 KBTBD6Q86V97 674 aa26.61■■□□□ 1.85
NME3-208ENST00000565379 RTL3Q8N8U3 475 aaKnown RBP26.61■■□□□ 1.85
NME3-208ENST00000565379 EXD1Q8NHP7 514 aa26.61■■□□□ 1.85
NME3-208ENST00000565379 TSC1Q92574 1164 aa26.61■■□□□ 1.85
NME3-208ENST00000565379 RBM41Q96IZ5 413 aaKnown RBP26.61■■□□□ 1.85
NME3-208ENST00000565379 CSPG4P5Q96PW8 444 aa26.61■■□□□ 1.85
NME3-208ENST00000565379 RTKNQ9BST9 563 aa26.61■■□□□ 1.85
NME3-208ENST00000565379 LRRD1A4D1F6 860 aa26.6■■□□□ 1.85
NME3-208ENST00000565379 DCLK1O15075 740 aa26.6■■□□□ 1.85
NME3-208ENST00000565379 TIMM44O43615 452 aa26.6■■□□□ 1.85
NME3-208ENST00000565379 ZRANB2O95218 330 aaKnown RBP eCLIP26.6■■□□□ 1.857e-7■■■■□ 23.2
NME3-208ENST00000565379 KAT7O95251 611 aa26.6■■□□□ 1.85
NME3-208ENST00000565379 KRT1P04264 644 aa26.6■■□□□ 1.85
NME3-208ENST00000565379 ETFBP38117 255 aa26.6■■□□□ 1.85
NME3-208ENST00000565379 RWDD2BP57060 319 aa26.6■■□□□ 1.85
NME3-208ENST00000565379 DPYSQ14117 519 aa26.6■■□□□ 1.85
NME3-208ENST00000565379 DPYSL3Q14195 570 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms