RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 SMARCD2Q92925 531 aa11.38□□□□□ -0.59
SF3B3-205ENST00000564899 FOXQ1Q9C009 403 aa11.38□□□□□ -0.59
SF3B3-205ENST00000564899 TMEM248Q9NWD8 314 aa11.38□□□□□ -0.59
SF3B3-205ENST00000564899 DONSONQ9NYP3 566 aa11.38□□□□□ -0.59
SF3B3-205ENST00000564899 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.38□□□□□ -0.59
SF3B3-205ENST00000564899 AMACRQ9UHK6 382 aa11.38□□□□□ -0.59
SF3B3-205ENST00000564899 CDH7Q9ULB5 785 aa11.38□□□□□ -0.59
SF3B3-205ENST00000564899 RAD54BQ9Y620 910 aa11.38□□□□□ -0.59
SF3B3-205ENST00000564899 ZFP37Q9Y6Q3 630 aaPredicted RBP11.38□□□□□ -0.59
SF3B3-205ENST00000564899 V9GYY5 206 aaPredicted RBP11.38□□□□□ -0.59
SF3B3-205ENST00000564899 NOTCH4Q99466 2003 aa11.38□□□□□ -0.59
SF3B3-205ENST00000564899 ASPMQ8IZT6 3477 aa11.37□□□□□ -0.59
SF3B3-205ENST00000564899 STK25O00506 426 aa11.37□□□□□ -0.59
SF3B3-205ENST00000564899 PPP1R12AO14974 1030 aaPredicted RBP11.37□□□□□ -0.59
SF3B3-205ENST00000564899 RAD51CO43502 376 aa11.37□□□□□ -0.59
SF3B3-205ENST00000564899 ECEL1O95672 775 aa11.37□□□□□ -0.59
SF3B3-205ENST00000564899 RHOXF2BP0C7M4 288 aa11.37□□□□□ -0.59
SF3B3-205ENST00000564899 RBP3P10745 1247 aa11.37□□□□□ -0.59
SF3B3-205ENST00000564899 MX2P20592 715 aa11.37□□□□□ -0.59
SF3B3-205ENST00000564899 CHKAP35790 457 aa11.37□□□□□ -0.59
SF3B3-205ENST00000564899 MAPKAPK2P49137 400 aa11.37□□□□□ -0.59
SF3B3-205ENST00000564899 SGSHP51688 502 aa11.37□□□□□ -0.59
SF3B3-205ENST00000564899 CDH4P55283 916 aa11.37□□□□□ -0.59
SF3B3-205ENST00000564899 RPS24P62847 133 aaKnown RBP11.37□□□□□ -0.59
SF3B3-205ENST00000564899 SLC10A2Q12908 348 aaPredicted RBP11.37□□□□□ -0.59
SF3B3-205ENST00000564899 XRCC4Q13426 336 aa11.37□□□□□ -0.59
SF3B3-205ENST00000564899 DHX34Q14147 1143 aaKnown RBP11.37□□□□□ -0.59
SF3B3-205ENST00000564899 PUM1Q14671 1186 aaKnown RBP eCLIP11.37□□□□□ -0.59
SF3B3-205ENST00000564899 PDK1Q15118 436 aa11.37□□□□□ -0.59
SF3B3-205ENST00000564899 OASLQ15646 514 aaKnown RBP11.37□□□□□ -0.59
SF3B3-205ENST00000564899 GLE1Q53GS7 698 aaKnown RBP11.37□□□□□ -0.59
SF3B3-205ENST00000564899 CHST9Q7L1S5 443 aa11.37□□□□□ -0.59
SF3B3-205ENST00000564899 OTOP3Q7RTS5 596 aa11.37□□□□□ -0.59
SF3B3-205ENST00000564899 MAATS1Q7Z4T9 603 aa11.37□□□□□ -0.59
SF3B3-205ENST00000564899 CDKL3Q8IVW4 592 aaPredicted RBP11.37□□□□□ -0.59
SF3B3-205ENST00000564899 CFAP52Q8N1V2 620 aa11.37□□□□□ -0.59
SF3B3-205ENST00000564899 CPXM2Q8N436 756 aa11.37□□□□□ -0.59
SF3B3-205ENST00000564899 SLC44A3Q8N4M1 653 aa11.37□□□□□ -0.59
SF3B3-205ENST00000564899 CCDC33Q8N5R6 958 aa11.37□□□□□ -0.59
SF3B3-205ENST00000564899 LZTR1Q8N653 840 aa11.37□□□□□ -0.59
SF3B3-205ENST00000564899 NETO2Q8NC67 525 aa11.37□□□□□ -0.59
SF3B3-205ENST00000564899 ATL2Q8NHH9 583 aa11.37□□□□□ -0.59
SF3B3-205ENST00000564899 GRK7Q8WTQ7 553 aa11.37□□□□□ -0.59
SF3B3-205ENST00000564899 CELF6Q96J87 481 aaKnown RBP11.37□□□□□ -0.59
SF3B3-205ENST00000564899 ASB16Q96NS5 453 aa11.37□□□□□ -0.59
SF3B3-205ENST00000564899 OLFM3Q96PB7 478 aa11.37□□□□□ -0.59
SF3B3-205ENST00000564899 QKIQ96PU8 341 aaKnown RBP eCLIP11.37□□□□□ -0.59
SF3B3-205ENST00000564899 HINFPQ9BQA5 517 aa11.37□□□□□ -0.59
SF3B3-205ENST00000564899 RHOXF2Q9BQY4 288 aa11.37□□□□□ -0.59
SF3B3-205ENST00000564899 LRRC1Q9BTT6 524 aa11.37□□□□□ -0.59
SF3B3-205ENST00000564899 KLC2Q9H0B6 622 aa11.37□□□□□ -0.59
SF3B3-205ENST00000564899 TBC1D14Q9P2M4 693 aa11.37□□□□□ -0.59
SF3B3-205ENST00000564899 PCYOX1Q9UHG3 505 aa11.37□□□□□ -0.59
SF3B3-205ENST00000564899 FEZ2Q9UHY8 353 aaPredicted RBP11.37□□□□□ -0.59
SF3B3-205ENST00000564899 ZNF148Q9UQR1 794 aa11.37□□□□□ -0.59
SF3B3-205ENST00000564899 DRG1Q9Y295 367 aaKnown RBP11.37□□□□□ -0.59
SF3B3-205ENST00000564899 ZZEF1O43149 2961 aa11.37□□□□□ -0.59
SF3B3-205ENST00000564899 A0A1B0GVM2 712 aa11.36□□□□□ -0.59
SF3B3-205ENST00000564899 TCAF2A6NFQ2 919 aa11.36□□□□□ -0.59
SF3B3-205ENST00000564899 FAM187AA6NFU0 413 aa11.36□□□□□ -0.59
SF3B3-205ENST00000564899 HACD1B0YJ81 288 aa11.36□□□□□ -0.59
SF3B3-205ENST00000564899 DFFAO00273 331 aa11.36□□□□□ -0.59
SF3B3-205ENST00000564899 GFRA2O00451 464 aa11.36□□□□□ -0.59
SF3B3-205ENST00000564899 TTI1O43156 1089 aa11.36□□□□□ -0.59
SF3B3-205ENST00000564899 TBL1XO60907 577 aa11.36□□□□□ -0.59
SF3B3-205ENST00000564899 CLDN11O75508 207 aa11.36□□□□□ -0.59
SF3B3-205ENST00000564899 GAS8O95995 478 aa11.36□□□□□ -0.59
SF3B3-205ENST00000564899 ITGAVP06756 1048 aa11.36□□□□□ -0.59
SF3B3-205ENST00000564899 GBP2P32456 591 aaPredicted RBP11.36□□□□□ -0.59
SF3B3-205ENST00000564899 VIPR2P41587 438 aa11.36□□□□□ -0.59
SF3B3-205ENST00000564899 PTGIRP43119 386 aa11.36□□□□□ -0.59
SF3B3-205ENST00000564899 LMNB2Q03252 620 aa11.36□□□□□ -0.59
SF3B3-205ENST00000564899 GALNT2Q10471 571 aa11.36□□□□□ -0.59
SF3B3-205ENST00000564899 ERCC6LQ2NKX8 1250 aa11.36□□□□□ -0.59
SF3B3-205ENST00000564899 MPPE1Q53F39 396 aa11.36□□□□□ -0.59
SF3B3-205ENST00000564899 DARS2Q6PI48 645 aaKnown RBP11.36□□□□□ -0.59
SF3B3-205ENST00000564899 GSTA5Q7RTV2 222 aa11.36□□□□□ -0.59
SF3B3-205ENST00000564899 JAMLQ86YT9 394 aa11.36□□□□□ -0.59
SF3B3-205ENST00000564899 ARHGAP12Q8IWW6 846 aa11.36□□□□□ -0.59
SF3B3-205ENST00000564899 TP53INP2Q8IXH6 220 aa11.36□□□□□ -0.59
SF3B3-205ENST00000564899 UMODL1-AS1Q8N2C9 162 aa11.36□□□□□ -0.59
SF3B3-205ENST00000564899 ALLCQ8N6M5 410 aa11.36□□□□□ -0.59
SF3B3-205ENST00000564899 TFB1MQ8WVM0 346 aaKnown RBP11.36□□□□□ -0.59
SF3B3-205ENST00000564899 RSPRY1Q96DX4 576 aa11.36□□□□□ -0.59
SF3B3-205ENST00000564899 TMA16Q96EY4 203 aaKnown RBP11.36□□□□□ -0.59
SF3B3-205ENST00000564899 TMEM121Q9BTD3 319 aa11.36□□□□□ -0.59
SF3B3-205ENST00000564899 RPP25Q9BUL9 199 aaKnown RBP11.36□□□□□ -0.59
SF3B3-205ENST00000564899 RETREG1Q9H6L5 497 aa11.36□□□□□ -0.59
SF3B3-205ENST00000564899 C10orf88Q9H8K7 445 aa11.36□□□□□ -0.59
SF3B3-205ENST00000564899 NDFIP2Q9NV92 336 aa11.36□□□□□ -0.59
SF3B3-205ENST00000564899 ZNF212Q9UDV6 495 aa11.36□□□□□ -0.59
SF3B3-205ENST00000564899 RALYQ9UKM9 306 aaKnown RBP11.36□□□□□ -0.59
SF3B3-205ENST00000564899 WNT6Q9Y6F9 365 aa11.36□□□□□ -0.59
SF3B3-205ENST00000564899 SPEGQ15772 3267 aa11.36□□□□□ -0.59
SF3B3-205ENST00000564899 BAHCC1Q9P281 2608 aa11.36□□□□□ -0.59
SF3B3-205ENST00000564899 DENND4CQ5VZ89 1909 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.35□□□□□ -0.59
SF3B3-205ENST00000564899 BCLAF3A2AJT9 711 aaKnown RBP11.35□□□□□ -0.59
SF3B3-205ENST00000564899 CFAP69A5D8W1 941 aa11.35□□□□□ -0.59
SF3B3-205ENST00000564899 HEPACAM2A8MVW5 462 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms