RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 GSTM1P09488 218 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 DEFA1P59665 94 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 DEFA3P59666 94 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 TMPRSS15P98073 1019 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 GSTM4Q03013 218 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 BIKQ13323 160 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 MAMLD1Q13495 774 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 MPP2Q14168 576 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 IER5Q5VY09 327 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 RBM23Q86U06 439 aaKnown RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 ERO1BQ86YB8 467 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 ACVR1CQ8NER5 493 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 RP9Q8TA86 221 aaKnown RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 SEC14L4Q9UDX3 406 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 H7C4K7 107 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 DGAT1O75907 488 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 HMGCRP04035 888 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 ACO1P21399 889 aaKnown RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 BDNFP23560 247 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 HOXA11P31270 313 aaPredicted RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 SOX6P35712 828 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 TRIP10Q15642 601 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 ALG11Q2TAA5 492 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 RARS2Q5T160 578 aaKnown RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 RWDD4Q6NW29 188 aaKnown RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 POLNQ7Z5Q5 900 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 MCOLN2Q8IZK6 566 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 PARP8Q8N3A8 854 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 OXR1Q8N573 874 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 BEND7Q8N7W2 519 aaPredicted RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 AFAP1L1Q8TED9 768 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 TRIM63Q969Q1 353 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 ESAMQ96AP7 390 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 FMO2Q99518 471 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 CDH19Q9H159 772 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 DHX35Q9H5Z1 703 aaKnown RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 TLR8Q9NR97 1041 aaKnown RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 KLC4Q9NSK0 619 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 FNIP2Q9P278 1114 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 CRYL1Q9Y2S2 319 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 ARPC4-TTLL3A0A0A6YYG9 625 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 KCNN4O15554 427 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 CST8O60676 142 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 SKAP2O75563 359 aaPredicted RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 SCAF4O95104 1147 aaKnown RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 MMP3P08254 477 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 GOT1P17174 413 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 PFKLP17858 780 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 STX2P32856 288 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 IRAK1P51617 712 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 ITGA1P56199 1179 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 MRPS22P82650 360 aaKnown RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 ZNF321PQ8N8H1 164 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 SEPT1Q8WYJ6 367 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 LRRC39Q96DD0 335 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 MYEOVQ96EZ4 313 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 HPDLQ96IR7 371 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 TBCBQ99426 244 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 RPF1Q9H9Y2 349 aaKnown RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 GGA2Q9UJY4 613 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 IRGMA1A4Y4 181 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 DNAJA2O60884 412 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 SCGB2A1O75556 95 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 APRTP07741 180 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 CLNS1AP54105 237 aaKnown RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 CSE1LP55060 971 aaKnown RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 SESN2P58004 480 aaPredicted RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 GPC5P78333 572 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 SKOR1P84550 965 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 XKR3Q5GH77 459 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 FIGNQ5HY92 759 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 DENND5BQ6ZUT9 1274 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 TAS1R1Q7RTX1 841 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 ADGRG6Q86SQ4 1221 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 JAMLQ86YT9 394 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 GPRC5AQ8NFJ5 357 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 AP5M1Q9H0R1 490 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 CCDC134Q9H6E4 229 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 AIPL1Q9NZN9 384 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 ANKRD6Q9Y2G4 727 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 TTC3P53804 2025 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 A0A0G2JLL6 359 aaPredicted RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 PAPSS1O43252 624 aaPredicted RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 STX11O75558 287 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 FAM107AO95990 144 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 LRG1P02750 347 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 PTX3P26022 381 aaPredicted RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 GRK3P35626 688 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 GLRBP48167 497 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 CDK17Q00537 523 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 DNAJC3Q13217 504 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 DYNC1I2Q13409 638 aaKnown RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 TNFAIP8L3Q5GJ75 292 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 PRSS55Q6UWB4 352 aaPredicted RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 PRRT2Q7Z6L0 340 aaPredicted RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 DIS3LQ8TF46 1054 aaKnown RBP3.42□□□□□ -1.86
CHD9-213ENST00000564845 MTERF3Q96E29 417 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 UROC1Q96N76 676 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 STK33Q9BYT3 514 aa3.42□□□□□ -1.86
CHD9-213ENST00000564845 SENP6Q9GZR1 1112 aaPredicted RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms