RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 TFE3P19532 575 aaPredicted RBP19.51■□□□□ 0.71
NME3-207ENST00000564628 HLA-FP30511 346 aa19.51■□□□□ 0.71
NME3-207ENST00000564628 CCR1P32246 355 aa19.51■□□□□ 0.71
NME3-207ENST00000564628 SGSHP51688 502 aa19.51■□□□□ 0.71
NME3-207ENST00000564628 ZBED6P86452 979 aa19.51■□□□□ 0.71
NME3-207ENST00000564628 ZBTB16Q05516 673 aa19.51■□□□□ 0.71
NME3-207ENST00000564628 TEAD4Q15561 434 aa19.51■□□□□ 0.71
NME3-207ENST00000564628 SLC25A52Q3SY17 297 aa19.51■□□□□ 0.71
NME3-207ENST00000564628 MPP7Q5T2T1 576 aa19.51■□□□□ 0.71
NME3-207ENST00000564628 HGSNATQ68CP4 663 aa19.51■□□□□ 0.71
NME3-207ENST00000564628 SARM1Q6SZW1 724 aa19.51■□□□□ 0.71
NME3-207ENST00000564628 ZNF571Q7Z3V5 609 aaPredicted RBP19.51■□□□□ 0.71
NME3-207ENST00000564628 PDZD3Q86UT5 571 aa19.51■□□□□ 0.71
NME3-207ENST00000564628 FAM124AQ86V42 546 aa19.51■□□□□ 0.71
NME3-207ENST00000564628 CACUL1Q86Y37 369 aa19.51■□□□□ 0.71
NME3-207ENST00000564628 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.51■□□□□ 0.71
NME3-207ENST00000564628 RHBDD1Q8TEB9 315 aa19.51■□□□□ 0.71
NME3-207ENST00000564628 BTN2A3PQ96KV6 586 aa19.51■□□□□ 0.71
NME3-207ENST00000564628 PRICKLE1Q96MT3 831 aaPredicted RBP19.51■□□□□ 0.71
NME3-207ENST00000564628 DDX50Q9BQ39 737 aaKnown RBP19.51■□□□□ 0.71
NME3-207ENST00000564628 C6orf106Q9H6K1 298 aaPredicted RBP19.51■□□□□ 0.71
NME3-207ENST00000564628 METTL5Q9NRN9 209 aaKnown RBP19.51■□□□□ 0.71
NME3-207ENST00000564628 SEPT11Q9NVA2 429 aaKnown RBP19.51■□□□□ 0.71
NME3-207ENST00000564628 PLA2G4CQ9UP65 541 aa19.51■□□□□ 0.71
NME3-207ENST00000564628 MUC22E2RYF6 1773 aaPredicted RBP19.51■□□□□ 0.71
NME3-207ENST00000564628 M0QYT0 321 aa19.5■□□□□ 0.71
NME3-207ENST00000564628 TSPAN3O60637 253 aa19.5■□□□□ 0.71
NME3-207ENST00000564628 ATXN1LP0C7T5 689 aaKnown RBP19.5■□□□□ 0.71
NME3-207ENST00000564628 HLA-EP13747 358 aa19.5■□□□□ 0.71
NME3-207ENST00000564628 ACSL1P33121 698 aa19.5■□□□□ 0.71
NME3-207ENST00000564628 GRIA4P48058 902 aa19.5■□□□□ 0.71
NME3-207ENST00000564628 CSNK1EP49674 416 aaKnown RBP19.5■□□□□ 0.71
NME3-207ENST00000564628 CXCR3P49682 368 aa19.5■□□□□ 0.71
NME3-207ENST00000564628 RNASE9P60153 205 aaKnown RBP19.5■□□□□ 0.71
NME3-207ENST00000564628 KIF19Q2TAC6 998 aa19.5■□□□□ 0.71
NME3-207ENST00000564628 MS4A13Q5J8X5 152 aa19.5■□□□□ 0.71
NME3-207ENST00000564628 ACAD10Q6JQN1 1059 aa19.5■□□□□ 0.71
NME3-207ENST00000564628 PPP1R2P3Q6NXS1 205 aa19.5■□□□□ 0.71
NME3-207ENST00000564628 RFWD3Q6PCD5 774 aa19.5■□□□□ 0.71
NME3-207ENST00000564628 C19orf48Q6RUI8 117 aa19.5■□□□□ 0.71
NME3-207ENST00000564628 KIAA0907Q7Z7F0 614 aaPredicted RBP19.5■□□□□ 0.71
NME3-207ENST00000564628 C3orf20Q8ND61 904 aa19.5■□□□□ 0.71
NME3-207ENST00000564628 MDM1Q8TC05 714 aa19.5■□□□□ 0.71
NME3-207ENST00000564628 TMA16Q96EY4 203 aaKnown RBP19.5■□□□□ 0.71
NME3-207ENST00000564628 MYEOVQ96EZ4 313 aa19.5■□□□□ 0.71
NME3-207ENST00000564628 TBCBQ99426 244 aa19.5■□□□□ 0.71
NME3-207ENST00000564628 PRMT1Q99873 361 aaKnown RBP19.5■□□□□ 0.71
NME3-207ENST00000564628 TRIM5Q9C035 493 aa19.5■□□□□ 0.71
NME3-207ENST00000564628 SCUBE2Q9NQ36 999 aa19.5■□□□□ 0.71
NME3-207ENST00000564628 PIGVQ9NUD9 493 aa19.5■□□□□ 0.71
NME3-207ENST00000564628 TMEM51Q9NW97 253 aa19.5■□□□□ 0.71
NME3-207ENST00000564628 DOCK4Q8N1I0 1966 aa19.5■□□□□ 0.71
NME3-207ENST00000564628 MOCS2O96007 188 aaPredicted RBP19.49■□□□□ 0.71
NME3-207ENST00000564628 TNFAIP3P21580 790 aa19.49■□□□□ 0.71
NME3-207ENST00000564628 SULT1E1P49888 294 aa19.49■□□□□ 0.71
NME3-207ENST00000564628 KLHL30Q0D2K2 578 aa19.49■□□□□ 0.71
NME3-207ENST00000564628 MTA1Q13330 715 aa19.49■□□□□ 0.71
NME3-207ENST00000564628 COL28A1Q2UY09 1125 aa19.49■□□□□ 0.71
NME3-207ENST00000564628 FNDC3BQ53EP0 1204 aaKnown RBP19.49■□□□□ 0.71
NME3-207ENST00000564628 ADIPOR2Q86V24 386 aa19.49■□□□□ 0.71
NME3-207ENST00000564628 AHI1Q8N157 1196 aa19.49■□□□□ 0.71
NME3-207ENST00000564628 GALNT15Q8N3T1 639 aa19.49■□□□□ 0.71
NME3-207ENST00000564628 EMC1Q8N766 993 aa19.49■□□□□ 0.71
NME3-207ENST00000564628 ATP6V0D2Q8N8Y2 350 aa19.49■□□□□ 0.71
NME3-207ENST00000564628 HJURPQ8NCD3 748 aaPredicted RBP19.49■□□□□ 0.71
NME3-207ENST00000564628 SNX19Q92543 992 aa19.49■□□□□ 0.71
NME3-207ENST00000564628 BTBD1Q9H0C5 482 aa19.49■□□□□ 0.71
NME3-207ENST00000564628 TAS2R14Q9NYV8 317 aa19.49■□□□□ 0.71
NME3-207ENST00000564628 ANKRD6Q9Y2G4 727 aa19.49■□□□□ 0.71
NME3-207ENST00000564628 SLCO1B1Q9Y6L6 691 aa19.49■□□□□ 0.71
NME3-207ENST00000564628 SYNJ2BP-COX16A0A087WUM0 186 aa19.48■□□□□ 0.71
NME3-207ENST00000564628 C2CD4BA6NLJ0 364 aa19.48■□□□□ 0.71
NME3-207ENST00000564628 I6L893 689 aaPredicted RBP19.48■□□□□ 0.71
NME3-207ENST00000564628 DDX3XO00571 662 aaKnown RBP eCLIP19.48■□□□□ 0.713e-7■■■■■ 28.4
NME3-207ENST00000564628 PCDHGA12O60330 932 aa19.48■□□□□ 0.71
NME3-207ENST00000564628 ENDOD1O94919 500 aa19.48■□□□□ 0.71
NME3-207ENST00000564628 SEMA4FO95754 770 aa19.48■□□□□ 0.71
NME3-207ENST00000564628 GZMAP12544 262 aa19.48■□□□□ 0.71
NME3-207ENST00000564628 TACR2P21452 398 aa19.48■□□□□ 0.71
NME3-207ENST00000564628 NME3Q13232 169 aa19.48■□□□□ 0.71
NME3-207ENST00000564628 PTPRNQ16849 979 aa19.48■□□□□ 0.71
NME3-207ENST00000564628 SOWAHCQ53LP3 525 aaPredicted RBP19.48■□□□□ 0.71
NME3-207ENST00000564628 BRMS1LQ5PSV4 323 aa19.48■□□□□ 0.71
NME3-207ENST00000564628 PPP1R15BQ5SWA1 713 aa19.48■□□□□ 0.71
NME3-207ENST00000564628 SPECC1LQ69YQ0 1117 aa19.48■□□□□ 0.71
NME3-207ENST00000564628 CHST9Q7L1S5 443 aa19.48■□□□□ 0.71
NME3-207ENST00000564628 VSTM4Q8IW00 320 aa19.48■□□□□ 0.71
NME3-207ENST00000564628 MCOLN2Q8IZK6 566 aa19.48■□□□□ 0.71
NME3-207ENST00000564628 JOSD2Q8TAC2 188 aa19.48■□□□□ 0.71
NME3-207ENST00000564628 IGSF8Q969P0 613 aa19.48■□□□□ 0.71
NME3-207ENST00000564628 VCPIP1Q96JH7 1222 aa19.48■□□□□ 0.71
NME3-207ENST00000564628 TM9SF3Q9HD45 589 aa19.48■□□□□ 0.71
NME3-207ENST00000564628 ARHGEF38Q9NXL2 777 aa19.48■□□□□ 0.71
NME3-207ENST00000564628 COX16Q9P0S2 106 aa19.48■□□□□ 0.71
NME3-207ENST00000564628 GGA2Q9UJY4 613 aa19.48■□□□□ 0.71
NME3-207ENST00000564628 BTBD3Q9Y2F9 522 aa19.48■□□□□ 0.71
NME3-207ENST00000564628 RAXQ9Y2V3 346 aa19.48■□□□□ 0.71
NME3-207ENST00000564628 LUC7L2Q9Y383 392 aaKnown RBP19.48■□□□□ 0.71
NME3-207ENST00000564628 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.48■□□□□ 0.714e-11■■□□□ 14.2
NME3-207ENST00000564628 SNX11Q9Y5W9 270 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms