RNA–Protein interactions for RNA: ENST00000563963.1

TUBGCP4-207, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 2

Gene TUBGCP4, Length 4,379 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-207ENST00000563963 LPPQ93052 612 aa6.05□□□□□ -1.44
TUBGCP4-207ENST00000563963 RBM4BQ9BQ04 359 aaKnown RBP6.05□□□□□ -1.44
TUBGCP4-207ENST00000563963 RBM4Q9BWF3 364 aaKnown RBP6.05□□□□□ -1.44
TUBGCP4-207ENST00000563963 CRISPLD2Q9H0B8 497 aa6.05□□□□□ -1.44
TUBGCP4-207ENST00000563963 TAF1DQ9H5J8 278 aaPredicted RBP6.05□□□□□ -1.44
TUBGCP4-207ENST00000563963 SMYD3Q9H7B4 428 aa6.05□□□□□ -1.44
TUBGCP4-207ENST00000563963 CPNE7Q9UBL6 633 aa6.05□□□□□ -1.44
TUBGCP4-207ENST00000563963 GNPTGQ9UJJ9 305 aa6.05□□□□□ -1.44
TUBGCP4-207ENST00000563963 UTP11Q9Y3A2 253 aaKnown RBP6.05□□□□□ -1.44
TUBGCP4-207ENST00000563963 KCNQ2O43526 872 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 SLITRK5O94991 958 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 PTX3P26022 381 aaPredicted RBP6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 ALDH1A3P47895 512 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 MAT1AQ00266 395 aaKnown RBP6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 ATP1A4Q13733 1029 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 TRIP13Q15645 432 aaPredicted RBP6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 JMJD6Q6NYC1 403 aaPredicted RBP6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 KLHL24Q6TFL4 600 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 DCDC5Q6ZRR9 648 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 UTS2BQ765I0 119 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 DPPA2Q7Z7J5 298 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 CENPSQ8N2Z9 138 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 LIX1Q8N485 282 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 KDF1Q8NAX2 398 aaPredicted RBP6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 GMCL1P1Q8NEA9 526 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 ZNF486Q96H40 463 aaPredicted RBP6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 ZIM3Q96PE6 472 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 FAM213AQ9BRX8 229 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 NTMT1Q9BV86 223 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 BRIP1Q9BX63 1249 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 OR2B2Q9GZK3 357 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 EXD2Q9NVH0 621 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 GPRC5DQ9NZD1 345 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 C19orf53Q9UNZ5 99 aaPredicted RBP6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 NAALAD2Q9Y3Q0 740 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 SAMHD1Q9Y3Z3 626 aaKnown RBP6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 TNS3Q68CZ2 1445 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 OR5K3A6NET4 321 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 TREHO43280 583 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 B4GAT1O43505 415 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 TBX18O95935 607 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 FHP07954 510 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 SNRNP70P08621 437 aaKnown RBP6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 MLNP12872 115 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 ATP1A3P13637 1013 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 LIG4P49917 911 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 FOXO1Q12778 655 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 PMS2P3Q13401 168 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 KCNAB1Q14722 419 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 FIGNQ5HY92 759 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 PDZD4Q76G19 769 aaPredicted RBP6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 MIGA2Q7L4E1 593 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 COPS6Q7L5N1 327 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 PYROXD2Q8N2H3 581 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 AGGF1Q8N302 714 aaeCLIP6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 FBXL6Q8N531 539 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 TSPYL6Q8N831 410 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 TMIEQ8NEW7 156 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 ZNF333Q96JL9 665 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 CITED4Q96RK1 184 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 CSRNP1Q96S65 589 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 UBAC1Q9BSL1 405 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 NFKBIZQ9BYH8 718 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 BLZF1Q9H2G9 400 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 SALL4Q9UJQ4 1053 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 STOML2Q9UJZ1 356 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 SLC12A4Q9UP95 1085 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 PCDHA3Q9Y5H8 950 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 ABCA3Q99758 1704 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 A0A0U1RQJ8 604 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 ASNA1O43681 348 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 SCO2O43819 266 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 PFKFB2O60825 505 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 CDH16O75309 829 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 PTP4A3O75365 173 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 SUN1O94901 812 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 HTR3BO95264 441 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 AFPP02771 609 aaKnown RBP6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 NTRK1P04629 796 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 UBTFL1P0CB47 393 aaPredicted RBP6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 POU3F3P20264 500 aaPredicted RBP6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 HOXA11P31270 313 aaPredicted RBP6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 SPCS3P61009 180 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 DLG4P78352 724 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 MTMR1Q13613 665 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 TXNRD1Q16881 649 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 TIGD6Q17RP2 521 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 RNF219Q5W0B1 726 aaPredicted RBP6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 KCNK18Q7Z418 384 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 TMC3Q7Z5M5 1100 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 RFX6Q8HWS3 928 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 ULK2Q8IYT8 1036 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 PCYOX1LQ8NBM8 494 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 GSTCDQ8NEC7 633 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 FAM136AQ96C01 138 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 ZDHHC15Q96MV8 337 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 AGAP2Q99490 1192 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 MEIS3Q99687 375 aa6.04□□□□□ -1.44
TUBGCP4-207ENST00000563963 SSX3Q99909 188 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms