RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 RBM22Q9NW64 420 aaKnown RBP eCLIP10.66□□□□□ -0.74e-7■■□□□ 11.6
RNF40-204ENST00000563683 PACSIN3Q9UKS6 424 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 ZNF510Q9Y2H8 683 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 C15orf38-AP3S2A0A0A6YYH1 394 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 SMIM28A0A1B0GU29 152 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 GOLGA8CPA6NN73 597 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 C22orf31O95567 290 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 CNTFP26441 200 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 SERPINB8P50452 374 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 AQP4P55087 323 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 INHBCP55103 352 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 TMED1Q13445 227 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 TRMT10BQ6PF06 316 aaKnown RBP10.66□□□□□ -0.7
RNF40-204ENST00000563683 ARPINQ7Z6K5 226 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 TFAP2DQ7Z6R9 452 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 DEFB107AQ8IZN7 70 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 GALNT4Q8N4A0 578 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 ABTB1Q969K4 478 aaPredicted RBP10.66□□□□□ -0.7
RNF40-204ENST00000563683 SERAC1Q96JX3 654 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 HSFY1Q96LI6 401 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 KCNK16Q96T55 309 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 CCDC106Q9BWC9 280 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 CATSPERBQ9H7T0 1116 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 MAN1C1Q9NR34 630 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 OR12D3Q9UGF7 316 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 SIX4Q9UIU6 781 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 DMTF1Q9Y222 760 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 FARP1Q9Y4F1 1045 aaPredicted RBP10.66□□□□□ -0.7
RNF40-204ENST00000563683 ANGPTL3Q9Y5C1 460 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 PPEF2O14830 753 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 HCRTO43612 131 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 TIMM44O43615 452 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 ZMPSTE24O75844 475 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 LTFP02788 710 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 PGAM1P18669 254 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 LHX1P48742 406 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 PSEN2P49810 448 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 SULT2A1Q06520 285 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 MGAT5BQ3V5L5 792 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 TCHHL1Q5QJ38 904 aaPredicted RBP10.66□□□□□ -0.7
RNF40-204ENST00000563683 C9orf57Q5W0N0 161 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 GPR142Q7Z601 462 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 KCNMB4Q86W47 210 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 WDTC1Q8N5D0 677 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 PRICKLE1Q96MT3 831 aaPredicted RBP10.66□□□□□ -0.7
RNF40-204ENST00000563683 SEPT5Q99719 369 aaPredicted RBP10.66□□□□□ -0.7
RNF40-204ENST00000563683 FICDQ9BVA6 458 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 MRPS26Q9BYN8 205 aaKnown RBP10.66□□□□□ -0.7
RNF40-204ENST00000563683 UPF3AQ9H1J1 476 aaKnown RBP10.66□□□□□ -0.7
RNF40-204ENST00000563683 ACSS2Q9NR19 701 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 CNTN3Q9P232 1028 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 BLOC1S6Q9UL45 172 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 ARHGAP26Q9UNA1 814 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 NRCAMQ92823 1304 aa10.66□□□□□ -0.7
RNF40-204ENST00000563683 E7ESA3 106 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 CCNT2O60583 730 aaKnown RBP10.65□□□□□ -0.7
RNF40-204ENST00000563683 ATP6V1G1O75348 118 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 PROCP04070 461 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 SERPINE1P05121 402 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 SPATA31D3P0C874 917 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 ODC1P11926 461 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 GRK2P25098 689 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 PTPN7P35236 360 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 GRIA1P42261 906 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 MATKP42679 507 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 SCNN1GP51170 649 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 FOLH1Q04609 750 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 ADRM1Q16186 407 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 LPCAT4Q643R3 524 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 PDPK2PQ6A1A2 396 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 GLB1LQ6UWU2 654 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 CXCL17Q6UXB2 119 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 SPATA31D4Q6ZUB0 917 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 IFNEQ86WN2 208 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 LRRC43Q8N309 656 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 EFCAB3Q8N7B9 438 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 CMASQ8NFW8 434 aaPredicted RBP10.65□□□□□ -0.7
RNF40-204ENST00000563683 FBXO27Q8NI29 283 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 PPTC7Q8NI37 304 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 PIWIL2Q8TC59 973 aaKnown RBP10.65□□□□□ -0.7
RNF40-204ENST00000563683 A0A088AWK7 358 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.65□□□□□ -0.7
RNF40-204ENST00000563683 PRR5-ARHGAP8B1AHC4 643 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 UGT1A9O60656 530 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 PGM3O95394 542 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 AOC1P19801 751 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 GRIA2P42262 883 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 ARHGAP8P85298 464 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 SLC25A3Q00325 362 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 DLG1Q12959 904 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 ZNF554Q86TJ5 538 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 CCDC185Q8N715 623 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 NAT8LQ8N9F0 302 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 PGLYRP2Q96PD5 576 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 UGT1A7Q9HAW7 530 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 UGT1A10Q9HAW8 530 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 UGT1A8Q9HAW9 530 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 IL1RL2Q9HB29 575 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 ACOT9Q9Y305 439 aa10.65□□□□□ -0.7
RNF40-204ENST00000563683 DTNAQ9Y4J8 743 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms