RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 ZKSCAN8Q15776 578 aaPredicted RBP5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 NTRK2Q16620 822 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 SLC39A12Q504Y0 691 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 CCDC178Q5BJE1 867 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 ATXN7L2Q5T6C5 722 aaPredicted RBP5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 NCEH1Q6PIU2 408 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 TMC5Q6UXY8 1006 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 MARK2Q7KZI7 788 aaKnown RBP5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 WFDC3Q8IUB2 231 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 SIX6OS1Q8N1H7 587 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 SUPT20HQ8NEM7 779 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 SETD6Q8TBK2 473 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 NETO1Q8TDF5 533 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 PRPF31Q8WWY3 499 aaKnown RBP5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 CTNNBL1Q8WYA6 563 aaPredicted RBP5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 VPS50Q96JG6 964 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 HIST1H2AHQ96KK5 128 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 HIST1H2AJQ99878 128 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 DUSP23Q9BVJ7 150 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 TAOK3Q9H2K8 898 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 KAT14Q9H8E8 782 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 ARHGEF3Q9NR81 526 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 ZBTB40Q9NUA8 1239 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 GIMAP4Q9NUV9 329 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 ANO10Q9NW15 660 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 GALNT8Q9NY28 637 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 MARCH4Q9P2E8 410 aaPredicted RBP5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 PCSK1NQ9UHG2 260 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 CAPN11Q9UMQ6 739 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 RCE1Q9Y256 329 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 RUVBL1Q9Y265 456 aaKnown RBP5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 SLC5A6Q9Y289 635 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 OAS3Q9Y6K5 1087 aaKnown RBP5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 SH3TC1Q8TE82 1336 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 USP42Q9H9J4 1324 aaKnown RBP5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 FANCIQ9NVI1 1328 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 COL15A1P39059 1388 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 PNMA6EA0A0J9YXQ4 647 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 ARHGEF37A1IGU5 675 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 LRRD1A4D1F6 860 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 GLOD5A6NK44 160 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 PSMD14O00487 310 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 HGSO14964 777 aaPredicted RBP5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 WDR46O15213 610 aaKnown RBP5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 ADCY6O43306 1168 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 PRAMEF4O60810 478 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 NOL3O60936 208 aaKnown RBP5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 GUCY1B2O75343 617 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 TULP3O75386 442 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 GPR32O75388 356 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 VIPP01282 170 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 LMNAP02545 664 aaKnown RBP5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 NTRK1P04629 796 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 SERPINB2P05120 415 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 EIF2S1P05198 315 aaKnown RBP5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 GRPP07492 148 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 GJB1P08034 283 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 TPH1P17752 444 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 KELP23276 732 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 PRKCHP24723 683 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 ANP32AP39687 249 aaKnown RBP5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 PRKCIP41743 596 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 IFNAR2P48551 515 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 LMAN1P49257 510 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 CDH15P55291 814 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 NRG3P56975 720 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 KRT17Q04695 432 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 MTM1Q13496 603 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 MST1LQ2TV78 715 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 RABL6Q3YEC7 729 aaPredicted RBP5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 CCDC152Q4G0S7 254 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 TOR1AIP1Q5JTV8 583 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 DGAT2L7PQ6IED9 249 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 ARHGAP11AQ6P4F7 1023 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 DRICH1Q6PGQ1 229 aaPredicted RBP5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 ARHGEF18Q6ZSZ5 1173 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 CNTN4Q8IWV2 1026 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 ANKRD44Q8N8A2 993 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 SYT2Q8N9I0 419 aaPredicted RBP5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 IL17RCQ8NAC3 791 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 ZCCHC10Q8TBK6 192 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 DNAAF4Q8WXU2 420 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 MIEF2Q96C03 454 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 GSDMAQ96QA5 445 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 UHRF1Q96T88 793 aaPredicted RBP5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 THUMPD2Q9BTF0 503 aaKnown RBP5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 TUBB6Q9BUF5 446 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 HSD3B7Q9H2F3 369 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 MROH8Q9H579 483 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 TASP1Q9H6P5 420 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 MRPL44Q9H9J2 332 aaKnown RBP5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 AATFQ9NY61 560 aaKnown RBP eCLIP5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 DKK4Q9UBT3 224 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 TRMT112Q9UI30 125 aaKnown RBP5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 ZDHHC8Q9ULC8 765 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 AURKCQ9UQB9 309 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 ATP11BQ9Y2G3 1177 aa5.43□□□□□ -1.54
VPS35P1-201ENST00000563400 WNK3Q9BYP7 1800 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms