RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 CYP4F2P78329 520 aa7.99□□□□□ -1.13
HERPUD1-206ENST00000563343 ZNF177Q13360 481 aaPredicted RBP7.99□□□□□ -1.13
HERPUD1-206ENST00000563343 BIRC3Q13489 604 aa7.99□□□□□ -1.13
HERPUD1-206ENST00000563343 MORC3Q14149 939 aa7.99□□□□□ -1.13
HERPUD1-206ENST00000563343 ELAVL3Q14576 367 aaKnown RBP7.99□□□□□ -1.13
HERPUD1-206ENST00000563343 ZACNQ401N2 412 aa7.99□□□□□ -1.13
HERPUD1-206ENST00000563343 SETMARQ53H47 684 aaPredicted RBP7.99□□□□□ -1.13
HERPUD1-206ENST00000563343 HS1BP3Q53T59 392 aa7.99□□□□□ -1.13
HERPUD1-206ENST00000563343 PITRM1Q5JRX3 1037 aa7.99□□□□□ -1.13
HERPUD1-206ENST00000563343 NADSYN1Q6IA69 706 aa7.99□□□□□ -1.13
HERPUD1-206ENST00000563343 ZCCHC8Q6NZY4 707 aaKnown RBP7.99□□□□□ -1.13
HERPUD1-206ENST00000563343 FOXR1Q6PIV2 292 aa7.99□□□□□ -1.13
HERPUD1-206ENST00000563343 CRTC1Q6UUV9 634 aa7.99□□□□□ -1.13
HERPUD1-206ENST00000563343 MMS22LQ6ZRQ5 1243 aa7.99□□□□□ -1.13
HERPUD1-206ENST00000563343 RSRC2Q7L4I2 434 aaKnown RBP7.99□□□□□ -1.13
HERPUD1-206ENST00000563343 HOMEZQ8IX15 550 aa7.99□□□□□ -1.13
HERPUD1-206ENST00000563343 C12orf56Q8IXR9 622 aa7.99□□□□□ -1.13
HERPUD1-206ENST00000563343 ARHGAP18Q8N392 663 aa7.99□□□□□ -1.13
HERPUD1-206ENST00000563343 MYOCQ99972 504 aa7.99□□□□□ -1.13
HERPUD1-206ENST00000563343 UBXN6Q9BZV1 441 aa7.99□□□□□ -1.13
HERPUD1-206ENST00000563343 ADNPQ9H2P0 1102 aa7.99□□□□□ -1.13
HERPUD1-206ENST00000563343 CCDC39Q9UFE4 941 aa7.99□□□□□ -1.13
HERPUD1-206ENST00000563343 FBXO2Q9UK22 296 aaPredicted RBP7.99□□□□□ -1.13
HERPUD1-206ENST00000563343 ZNF106Q9H2Y7 1883 aaKnown RBP7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 C2CD3Q4AC94 2353 aa7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 CPED1A4D0V7 1026 aa7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 NEMP2A6NFY4 417 aa7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 TULP2O00295 520 aa7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 MSI1O43347 362 aaKnown RBP7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 PRLRP16471 622 aa7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 POU3F2P20265 443 aaPredicted RBP7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 STK19P49842 368 aaPredicted RBP7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 AP3M2P53677 418 aa7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 SNRPFP62306 86 aaKnown RBP7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 DLG4P78352 724 aa7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 CNTN1Q12860 1018 aa7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 SGSM1Q2NKQ1 1148 aa7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 ZNF284Q2VY69 593 aa7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 ZNF542PQ5EBM4 170 aa7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 C1orf220Q5T0J3 134 aa7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 STXBP4Q6ZWJ1 553 aa7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 ABI3BPQ7Z7G0 1075 aa7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 B3GNT8Q7Z7M8 397 aa7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 C14orf80Q86SX3 495 aa7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 VASH2Q86V25 355 aa7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 PIGZQ86VD9 579 aa7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 MFN1Q8IWA4 741 aa7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 CCDC65Q8IXS2 484 aa7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 APCDD1Q8J025 514 aa7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 ZNF557Q8N988 423 aaPredicted RBP7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 ZNF548Q8NEK5 533 aaPredicted RBP7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 TPCN2Q8NHX9 752 aa7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 FRS2Q8WU20 508 aa7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 RPL10LQ96L21 214 aaKnown RBP7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 NT5C1AQ9BXI3 368 aa7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 CALN1Q9BXU9 219 aa7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 APOBEC3GQ9HC16 384 aaKnown RBP7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 FZD3Q9NPG1 666 aa7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 OLA1Q9NTK5 396 aaKnown RBP7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 EVA1BQ9NVM1 165 aa7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 PLEKHB1Q9UF11 243 aaPredicted RBP7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 KLF15Q9UIH9 416 aa7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 SALL4Q9UJQ4 1053 aa7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 CSNK1G3Q9Y6M4 447 aa7.98□□□□□ -1.13
HERPUD1-206ENST00000563343 OTOGQ6ZRI0 2925 aa7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 PLD2O14939 933 aa7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 NVLO15381 856 aaKnown RBP7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 SLC31A1O15431 190 aa7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 IRAK2O43187 625 aa7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 ACSL4O60488 711 aa7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 KIF20AO95235 890 aa7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 CSF2P04141 144 aa7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 P4HA1P13674 534 aa7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 HGFP14210 728 aa7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 NME1P15531 152 aaKnown RBP7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 UGT1A5P35504 534 aa7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 CD97P48960 835 aa7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 CLDN2P57739 230 aa7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 RPS24P62847 133 aaKnown RBP7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 ECT2LQ008S8 904 aa7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 FZD2Q14332 565 aa7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 PIP5KL1Q5T9C9 394 aa7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 MSANTD2Q6P1R3 559 aa7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 SV2AQ7L0J3 742 aa7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 RAB11FIP2Q7L804 512 aa7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 DTX1Q86Y01 620 aa7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 SLC35F3Q8IY50 421 aa7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 EDEM1Q92611 657 aa7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 TAF4BQ92750 862 aa7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 KLK6Q92876 244 aa7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 AZIN2Q96A70 460 aa7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 MIB2Q96AX9 1013 aa7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 BMFQ96LC9 184 aa7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 CLIC6Q96NY7 704 aa7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 SPAG5Q96R06 1193 aa7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 BOCQ9BWV1 1114 aa7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 SLC12A9Q9BXP2 914 aa7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 ULBP1Q9BZM6 244 aa7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 LRRC4CQ9HCJ2 640 aa7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 PREBQ9HCU5 417 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms