RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 ZNF781Q8N8C0 355 aa13.36□□□□□ -0.27
USB1-207ENST00000563149 DNAAF3Q8N9W5 541 aa13.36□□□□□ -0.27
USB1-207ENST00000563149 PYDC1Q8WXC3 89 aa13.36□□□□□ -0.27
USB1-207ENST00000563149 HDAC11Q96DB2 347 aa13.36□□□□□ -0.27
USB1-207ENST00000563149 PGAP3Q96FM1 320 aaPredicted RBP13.36□□□□□ -0.27
USB1-207ENST00000563149 CENPKQ9BS16 269 aa13.36□□□□□ -0.27
USB1-207ENST00000563149 MCMBPQ9BTE3 642 aa13.36□□□□□ -0.27
USB1-207ENST00000563149 IL22Q9GZX6 179 aa13.36□□□□□ -0.27
USB1-207ENST00000563149 GBA3Q9H227 469 aa13.36□□□□□ -0.27
USB1-207ENST00000563149 ZNF358Q9NW07 568 aa13.36□□□□□ -0.27
USB1-207ENST00000563149 PIH1D1Q9NWS0 290 aaKnown RBP13.36□□□□□ -0.27
USB1-207ENST00000563149 OXSMQ9NWU1 459 aa13.36□□□□□ -0.27
USB1-207ENST00000563149 VPS28Q9UK41 221 aa13.36□□□□□ -0.27
USB1-207ENST00000563149 RAP2CQ9Y3L5 183 aa13.36□□□□□ -0.27
USB1-207ENST00000563149 ZNF236Q9UL36 1845 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 ADCY6O43306 1168 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 DCXO43602 365 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 STRNO43815 780 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 C2P06681 752 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 COL6A2P12110 1019 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 TKTP29401 623 aaKnown RBP13.35□□□□□ -0.27
USB1-207ENST00000563149 CSRP3P50461 194 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 DUSP28Q4G0W2 176 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 VWA5B1Q5TIE3 1220 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 FOXB2Q5VYV0 432 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 CES3Q6UWW8 571 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 DLK2Q6UY11 383 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 KCNMB4Q86W47 210 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 SIX6OS1Q8N1H7 587 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 TDRD5Q8NAT2 981 aaKnown RBP13.35□□□□□ -0.27
USB1-207ENST00000563149 GPRC5AQ8NFJ5 357 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 RP9Q8TA86 221 aaKnown RBP13.35□□□□□ -0.27
USB1-207ENST00000563149 GDPD5Q8WTR4 605 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 OPTNQ96CV9 577 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 TSNARE1Q96NA8 513 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 TUBGCP5Q96RT8 1024 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 GORASP1Q9BQQ3 440 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 CEP41Q9BYV8 373 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 DRC3Q9H069 523 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 NXF3Q9H4D5 531 aaKnown RBP13.35□□□□□ -0.27
USB1-207ENST00000563149 EBF3Q9H4W6 596 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 TCF7L2Q9NQB0 619 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 C6orf203Q9P0P8 240 aaPredicted RBP13.35□□□□□ -0.27
USB1-207ENST00000563149 VTI1BQ9UEU0 232 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 TBC1D30Q9Y2I9 924 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 SLC4A7Q9Y6M7 1214 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 TSC2P49815 1807 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 RGSL1A5PLK6 1076 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 ZBTB14O43829 449 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 CABYRO75952 493 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 SNUPNO95149 360 aaKnown RBP13.35□□□□□ -0.27
USB1-207ENST00000563149 PTPN1P18031 435 aaKnown RBP13.35□□□□□ -0.27
USB1-207ENST00000563149 SERPINB6P35237 376 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 SH3BGRP55822 239 aaPredicted RBP13.35□□□□□ -0.27
USB1-207ENST00000563149 TPI1P60174 286 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 PITX1P78337 314 aaPredicted RBP13.35□□□□□ -0.27
USB1-207ENST00000563149 ZNF33AQ06730 810 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 GRM2Q14416 872 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 PRPSAP1Q14558 356 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 RBBP5Q15291 538 aaKnown RBP13.35□□□□□ -0.27
USB1-207ENST00000563149 ANO4Q32M45 955 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 ARL13BQ3SXY8 428 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 SLC9B1Q4ZJI4 515 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 ZYG11AQ6WRX3 759 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 RNF111Q6ZNA4 994 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 OSTM1Q86WC4 334 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 PHTF2Q8N3S3 785 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 CPSF7Q8N684 471 aaKnown RBP13.35□□□□□ -0.27
USB1-207ENST00000563149 PHC3Q8NDX5 983 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 AZIN2Q96A70 460 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 AGAP3Q96P47 875 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 GATA5Q9BWX5 397 aaPredicted RBP13.35□□□□□ -0.27
USB1-207ENST00000563149 CYP4F11Q9HBI6 524 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 PIGVQ9NUD9 493 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 STK39Q9UEW8 545 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 FBXW11Q9UKB1 542 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 GJD2Q9UKL4 321 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 ADAMTS6Q9UKP5 1117 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 PSMD13Q9UNM6 376 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 HES2Q9Y543 173 aa13.35□□□□□ -0.27
USB1-207ENST00000563149 LOC100653049A0A140TA62 436 aa13.34□□□□□ -0.27
USB1-207ENST00000563149 EME2A4GXA9 379 aaPredicted RBP13.34□□□□□ -0.27
USB1-207ENST00000563149 KCNK1O00180 336 aa13.34□□□□□ -0.27
USB1-207ENST00000563149 MATN2O00339 956 aa13.34□□□□□ -0.27
USB1-207ENST00000563149 HDAC3O15379 428 aa13.34□□□□□ -0.27
USB1-207ENST00000563149 ZBTB24O43167 697 aaPredicted RBP13.34□□□□□ -0.27
USB1-207ENST00000563149 MAP3K13O43283 966 aa13.34□□□□□ -0.27
USB1-207ENST00000563149 AP1G1O43747 822 aa13.34□□□□□ -0.27
USB1-207ENST00000563149 KRT34O76011 436 aa13.34□□□□□ -0.27
USB1-207ENST00000563149 PDE5AO76074 875 aa13.34□□□□□ -0.27
USB1-207ENST00000563149 F9P00740 461 aa13.34□□□□□ -0.27
USB1-207ENST00000563149 ZCCHC18P0CG32 403 aa13.34□□□□□ -0.27
USB1-207ENST00000563149 LRPAP1P30533 357 aa13.34□□□□□ -0.27
USB1-207ENST00000563149 RPL14P50914 215 aaKnown RBP13.34□□□□□ -0.27
USB1-207ENST00000563149 USP4Q13107 963 aa13.34□□□□□ -0.27
USB1-207ENST00000563149 NME3Q13232 169 aa13.34□□□□□ -0.27
USB1-207ENST00000563149 HERC3Q15034 1050 aa13.34□□□□□ -0.27
USB1-207ENST00000563149 LIN52Q52LA3 116 aa13.34□□□□□ -0.27
USB1-207ENST00000563149 SFT2D3Q587I9 215 aa13.34□□□□□ -0.27
USB1-207ENST00000563149 HSP90AA5PQ58FG0 334 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms