RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 ACP6Q9NPH0 428 aa13.38□□□□□ -0.27
SF3B3-202ENST00000562722 CYTH4Q9UIA0 394 aa13.38□□□□□ -0.27
SF3B3-202ENST00000562722 CNTN6Q9UQ52 1028 aa13.38□□□□□ -0.27
SF3B3-202ENST00000562722 AK5Q9Y6K8 562 aa13.38□□□□□ -0.27
SF3B3-202ENST00000562722 E9PAM4 449 aa13.37□□□□□ -0.27
SF3B3-202ENST00000562722 C1QTNF3-AMACRE9PGA6 284 aa13.37□□□□□ -0.27
SF3B3-202ENST00000562722 GRAP2O75791 330 aa13.37□□□□□ -0.27
SF3B3-202ENST00000562722 IGLV3-25P01717 112 aa13.37□□□□□ -0.27
SF3B3-202ENST00000562722 C1SP09871 688 aa13.37□□□□□ -0.27
SF3B3-202ENST00000562722 CDK4P11802 303 aa13.37□□□□□ -0.27
SF3B3-202ENST00000562722 BMP6P22004 513 aa13.37□□□□□ -0.27
SF3B3-202ENST00000562722 DRD3P35462 400 aa13.37□□□□□ -0.27
SF3B3-202ENST00000562722 ABCG1P45844 678 aa13.37□□□□□ -0.27
SF3B3-202ENST00000562722 METAP1P53582 386 aa13.37□□□□□ -0.27
SF3B3-202ENST00000562722 CENPCQ03188 943 aa13.37□□□□□ -0.27
SF3B3-202ENST00000562722 NME3Q13232 169 aa13.37□□□□□ -0.27
SF3B3-202ENST00000562722 BECN1Q14457 450 aa13.37□□□□□ -0.27
SF3B3-202ENST00000562722 STAT4Q14765 748 aa13.37□□□□□ -0.27
SF3B3-202ENST00000562722 ARHGAP44Q17R89 818 aa13.37□□□□□ -0.27
SF3B3-202ENST00000562722 ENOSF1Q7L5Y1 443 aa13.37□□□□□ -0.27
SF3B3-202ENST00000562722 PASD1Q8IV76 773 aa13.37□□□□□ -0.27
SF3B3-202ENST00000562722 DEFB106AQ8N104 65 aa13.37□□□□□ -0.27
SF3B3-202ENST00000562722 CRACR2AQ9BSW2 395 aa13.37□□□□□ -0.27
SF3B3-202ENST00000562722 VPS28Q9UK41 221 aa13.37□□□□□ -0.27
SF3B3-202ENST00000562722 KNL1Q8NG31 2342 aa13.36□□□□□ -0.27
SF3B3-202ENST00000562722 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.36□□□□□ -0.27
SF3B3-202ENST00000562722 SLC7A4O43246 635 aa13.36□□□□□ -0.27
SF3B3-202ENST00000562722 LATO43561 262 aa13.36□□□□□ -0.27
SF3B3-202ENST00000562722 MAGEC1O60732 1142 aa13.36□□□□□ -0.27
SF3B3-202ENST00000562722 SDC3O75056 442 aa13.36□□□□□ -0.27
SF3B3-202ENST00000562722 FGFR1OPO95684 399 aaKnown RBP13.36□□□□□ -0.27
SF3B3-202ENST00000562722 ACADVLP49748 655 aa13.36□□□□□ -0.27
SF3B3-202ENST00000562722 SEMG2Q02383 582 aa13.36□□□□□ -0.27
SF3B3-202ENST00000562722 BNIP3Q12983 259 aa13.36□□□□□ -0.27
SF3B3-202ENST00000562722 ZNF177Q13360 481 aaPredicted RBP13.36□□□□□ -0.27
SF3B3-202ENST00000562722 MORC3Q14149 939 aa13.36□□□□□ -0.27
SF3B3-202ENST00000562722 SETMARQ53H47 684 aaPredicted RBP13.36□□□□□ -0.27
SF3B3-202ENST00000562722 HES3Q5TGS1 186 aa13.36□□□□□ -0.27
SF3B3-202ENST00000562722 CXorf57Q6NSI4 855 aaKnown RBP13.36□□□□□ -0.27
SF3B3-202ENST00000562722 FBXL22Q6P050 247 aa13.36□□□□□ -0.27
SF3B3-202ENST00000562722 GJB7Q6PEY0 223 aa13.36□□□□□ -0.27
SF3B3-202ENST00000562722 FOXR2Q6PJQ5 311 aa13.36□□□□□ -0.27
SF3B3-202ENST00000562722 Q6ZVU0 165 aa13.36□□□□□ -0.27
SF3B3-202ENST00000562722 ELOA2Q8IYF1 753 aaPredicted RBP13.36□□□□□ -0.27
SF3B3-202ENST00000562722 MFSD2AQ8NA29 543 aa13.36□□□□□ -0.27
SF3B3-202ENST00000562722 PIP4K2CQ8TBX8 421 aa13.36□□□□□ -0.27
SF3B3-202ENST00000562722 FRS2Q8WU20 508 aa13.36□□□□□ -0.27
SF3B3-202ENST00000562722 PPP1R13BQ96KQ4 1090 aa13.36□□□□□ -0.27
SF3B3-202ENST00000562722 FAM81BQ96LP2 452 aa13.36□□□□□ -0.27
SF3B3-202ENST00000562722 NOX5Q96PH1 765 aa13.36□□□□□ -0.27
SF3B3-202ENST00000562722 PRMT1Q99873 361 aaKnown RBP13.36□□□□□ -0.27
SF3B3-202ENST00000562722 MUC3BQ9H195 1237 aa13.36□□□□□ -0.27
SF3B3-202ENST00000562722 SYNCQ9H7C4 482 aa13.36□□□□□ -0.27
SF3B3-202ENST00000562722 SARDHQ9UL12 918 aa13.36□□□□□ -0.27
SF3B3-202ENST00000562722 VANGL2Q9ULK5 521 aa13.36□□□□□ -0.27
SF3B3-202ENST00000562722 APC2O95996 2303 aa13.36□□□□□ -0.27
SF3B3-202ENST00000562722 CABIN1Q9Y6J0 2220 aa13.35□□□□□ -0.27
SF3B3-202ENST00000562722 A0A087WV48 116 aa13.35□□□□□ -0.27
SF3B3-202ENST00000562722 PLRG1O43660 514 aaKnown RBP13.35□□□□□ -0.27
SF3B3-202ENST00000562722 HSF2BPO75031 334 aa13.35□□□□□ -0.27
SF3B3-202ENST00000562722 NUDT1P36639 197 aa13.35□□□□□ -0.27
SF3B3-202ENST00000562722 GGCXP38435 758 aa13.35□□□□□ -0.27
SF3B3-202ENST00000562722 PLK1P53350 603 aa13.35□□□□□ -0.27
SF3B3-202ENST00000562722 MARSP56192 900 aaKnown RBP13.35□□□□□ -0.27
SF3B3-202ENST00000562722 CNTN1Q12860 1018 aa13.35□□□□□ -0.27
SF3B3-202ENST00000562722 TARDBPQ13148 414 aaKnown RBP eCLIP13.35□□□□□ -0.27
SF3B3-202ENST00000562722 AUHQ13825 339 aaKnown RBP13.35□□□□□ -0.27
SF3B3-202ENST00000562722 DLG2Q15700 870 aa13.35□□□□□ -0.27
SF3B3-202ENST00000562722 HS1BP3Q53T59 392 aa13.35□□□□□ -0.27
SF3B3-202ENST00000562722 EFHC1Q5JVL4 640 aa13.35□□□□□ -0.27
SF3B3-202ENST00000562722 OR6B2Q6IFH4 312 aa13.35□□□□□ -0.27
SF3B3-202ENST00000562722 LRRC69Q6ZNQ3 347 aa13.35□□□□□ -0.27
SF3B3-202ENST00000562722 SPATS2Q86XZ4 545 aaKnown RBP13.35□□□□□ -0.27
SF3B3-202ENST00000562722 CRELD1Q96HD1 420 aa13.35□□□□□ -0.27
SF3B3-202ENST00000562722 SLC2A13Q96QE2 648 aa13.35□□□□□ -0.27
SF3B3-202ENST00000562722 CPXM1Q96SM3 734 aa13.35□□□□□ -0.27
SF3B3-202ENST00000562722 MYOCQ99972 504 aa13.35□□□□□ -0.27
SF3B3-202ENST00000562722 FEM1AQ9BSK4 669 aa13.35□□□□□ -0.27
SF3B3-202ENST00000562722 SIK2Q9H0K1 926 aa13.35□□□□□ -0.27
SF3B3-202ENST00000562722 KDM4CQ9H3R0 1056 aa13.35□□□□□ -0.27
SF3B3-202ENST00000562722 ERVMER34-1Q9H9K5 563 aa13.35□□□□□ -0.27
SF3B3-202ENST00000562722 DMTF1Q9Y222 760 aa13.35□□□□□ -0.27
SF3B3-202ENST00000562722 FARP1Q9Y4F1 1045 aaPredicted RBP13.35□□□□□ -0.27
SF3B3-202ENST00000562722 ACACAQ13085 2346 aa13.35□□□□□ -0.27
SF3B3-202ENST00000562722 COL5A1P20908 1838 aaPredicted RBP13.34□□□□□ -0.27
SF3B3-202ENST00000562722 CELSR3Q9NYQ7 3312 aa13.34□□□□□ -0.27
SF3B3-202ENST00000562722 PRAMEF26H0Y7S4 382 aa13.34□□□□□ -0.27
SF3B3-202ENST00000562722 ATP9BO43861 1147 aa13.34□□□□□ -0.27
SF3B3-202ENST00000562722 GLI1P08151 1106 aa13.34□□□□□ -0.27
SF3B3-202ENST00000562722 CKMT2P17540 419 aa13.34□□□□□ -0.27
SF3B3-202ENST00000562722 SLC9A1P19634 815 aa13.34□□□□□ -0.27
SF3B3-202ENST00000562722 RXRGP48443 463 aa13.34□□□□□ -0.27
SF3B3-202ENST00000562722 IRAK1P51617 712 aa13.34□□□□□ -0.27
SF3B3-202ENST00000562722 SNX16P57768 344 aa13.34□□□□□ -0.27
SF3B3-202ENST00000562722 MTA1Q13330 715 aa13.34□□□□□ -0.27
SF3B3-202ENST00000562722 AGBL4Q5VU57 503 aa13.34□□□□□ -0.27
SF3B3-202ENST00000562722 TRIM65Q6PJ69 517 aa13.34□□□□□ -0.27
SF3B3-202ENST00000562722 GBP6Q6ZN66 633 aa13.34□□□□□ -0.27
SF3B3-202ENST00000562722 C11orf57Q6ZUT1 292 aaPredicted RBP13.34□□□□□ -0.27
SF3B3-202ENST00000562722 FAM183BPQ6ZVS7 135 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms