RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 A0A1W2PNU3 283 aaPredicted RBP18.98■□□□□ 0.63
KATNB1-202ENST00000562542 CPED1A4D0V7 1026 aa18.98■□□□□ 0.63
KATNB1-202ENST00000562542 C1QTNF3-AMACRE9PGA6 284 aa18.98■□□□□ 0.63
KATNB1-202ENST00000562542 K7ESM1 405 aa18.98■□□□□ 0.63
KATNB1-202ENST00000562542 PIK3R2O00459 728 aa18.98■□□□□ 0.63
KATNB1-202ENST00000562542 TERTO14746 1132 aaKnown RBP18.98■□□□□ 0.63
KATNB1-202ENST00000562542 RNGTTO60942 597 aaKnown RBP18.98■□□□□ 0.63
KATNB1-202ENST00000562542 NEBLO76041 1014 aa18.98■□□□□ 0.63
KATNB1-202ENST00000562542 GIMD1P0DJR0 217 aa18.98■□□□□ 0.63
KATNB1-202ENST00000562542 ZNF18P17022 549 aa18.98■□□□□ 0.63
KATNB1-202ENST00000562542 TGM2P21980 687 aa18.98■□□□□ 0.63
KATNB1-202ENST00000562542 NUCB2P80303 420 aa18.98■□□□□ 0.63
KATNB1-202ENST00000562542 SKOR1P84550 965 aa18.98■□□□□ 0.63
KATNB1-202ENST00000562542 CDKN3Q16667 212 aa18.98■□□□□ 0.63
KATNB1-202ENST00000562542 ARL13BQ3SXY8 428 aa18.98■□□□□ 0.63
KATNB1-202ENST00000562542 ACCSLQ4AC99 568 aa18.98■□□□□ 0.63
KATNB1-202ENST00000562542 DCAF6Q58WW2 860 aa18.98■□□□□ 0.63
KATNB1-202ENST00000562542 AGBL4Q5VU57 503 aa18.98■□□□□ 0.63
KATNB1-202ENST00000562542 ZNF574Q6ZN55 896 aaPredicted RBP18.98■□□□□ 0.63
KATNB1-202ENST00000562542 FAM186BQ8IYM0 893 aa18.98■□□□□ 0.63
KATNB1-202ENST00000562542 CEP57L1Q8IYX8 460 aa18.98■□□□□ 0.63
KATNB1-202ENST00000562542 TMEM145Q8NBT3 493 aa18.98■□□□□ 0.63
KATNB1-202ENST00000562542 OR13H1Q8NG92 308 aa18.98■□□□□ 0.63
KATNB1-202ENST00000562542 FAM131CQ96AQ9 280 aa18.98■□□□□ 0.63
KATNB1-202ENST00000562542 ARRDC3Q96B67 414 aa18.98■□□□□ 0.63
KATNB1-202ENST00000562542 GRAMD1AQ96CP6 724 aa18.98■□□□□ 0.63
KATNB1-202ENST00000562542 PREBQ9HCU5 417 aa18.98■□□□□ 0.63
KATNB1-202ENST00000562542 FZD3Q9NPG1 666 aa18.98■□□□□ 0.63
KATNB1-202ENST00000562542 DNAJC28Q9NX36 388 aa18.98■□□□□ 0.63
KATNB1-202ENST00000562542 SARDHQ9UL12 918 aa18.98■□□□□ 0.63
KATNB1-202ENST00000562542 PCDHGA8Q9Y5G5 932 aa18.98■□□□□ 0.63
KATNB1-202ENST00000562542 NYNRINQ9P2P1 1898 aaKnown RBP18.98■□□□□ 0.63
KATNB1-202ENST00000562542 LY6G6EA0A0G2JKS1 128 aa18.97■□□□□ 0.63
KATNB1-202ENST00000562542 SCAMP1O15126 338 aa18.97■□□□□ 0.63
KATNB1-202ENST00000562542 MAPK13O15264 365 aa18.97■□□□□ 0.63
KATNB1-202ENST00000562542 TNFSF15O95150 251 aa18.97■□□□□ 0.63
KATNB1-202ENST00000562542 SETSIPP0DME0 302 aa18.97■□□□□ 0.63
KATNB1-202ENST00000562542 NR2F2P24468 414 aa18.97■□□□□ 0.63
KATNB1-202ENST00000562542 AKT2P31751 481 aa18.97■□□□□ 0.63
KATNB1-202ENST00000562542 RGS7P49802 495 aa18.97■□□□□ 0.63
KATNB1-202ENST00000562542 ZNF542PQ5EBM4 170 aa18.97■□□□□ 0.63
KATNB1-202ENST00000562542 KRT39Q6A163 491 aa18.97■□□□□ 0.63
KATNB1-202ENST00000562542 RBM44Q6ZP01 1051 aaKnown RBP18.97■□□□□ 0.63
KATNB1-202ENST00000562542 LGI2Q8N0V4 545 aa18.97■□□□□ 0.63
KATNB1-202ENST00000562542 KCTD13Q8WZ19 329 aa18.97■□□□□ 0.63
KATNB1-202ENST00000562542 SEMA4DQ92854 862 aa18.97■□□□□ 0.63
KATNB1-202ENST00000562542 FAXDC2Q96IV6 333 aa18.97■□□□□ 0.63
KATNB1-202ENST00000562542 FAM13BQ9NYF5 915 aa18.97■□□□□ 0.63
KATNB1-202ENST00000562542 ENTPD2Q9Y5L3 495 aa18.97■□□□□ 0.63
KATNB1-202ENST00000562542 U3KQA8 63 aa18.97■□□□□ 0.63
KATNB1-202ENST00000562542 BOD1L1Q8NFC6 3051 aa18.97■□□□□ 0.63
KATNB1-202ENST00000562542 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.96■□□□□ 0.63
KATNB1-202ENST00000562542 A0A1W2PQU0 124 aa18.96■□□□□ 0.63
KATNB1-202ENST00000562542 PMS2P1A4D2B8 440 aa18.96■□□□□ 0.63
KATNB1-202ENST00000562542 CDRT15L2A8MXV6 281 aa18.96■□□□□ 0.63
KATNB1-202ENST00000562542 KLRC4O43908 158 aa18.96■□□□□ 0.63
KATNB1-202ENST00000562542 LTFP02788 710 aa18.96■□□□□ 0.63
KATNB1-202ENST00000562542 PDGFRAP16234 1089 aa18.96■□□□□ 0.63
KATNB1-202ENST00000562542 SULT2A1Q06520 285 aa18.96■□□□□ 0.63
KATNB1-202ENST00000562542 ZNF177Q13360 481 aaPredicted RBP18.96■□□□□ 0.63
KATNB1-202ENST00000562542 CUL4AQ13619 759 aa18.96■□□□□ 0.63
KATNB1-202ENST00000562542 CRTC1Q6UUV9 634 aa18.96■□□□□ 0.63
KATNB1-202ENST00000562542 USP53Q70EK8 1073 aa18.96■□□□□ 0.63
KATNB1-202ENST00000562542 EFL1Q7Z2Z2 1120 aaKnown RBP18.96■□□□□ 0.63
KATNB1-202ENST00000562542 IRGQQ8WZA9 623 aa18.96■□□□□ 0.63
KATNB1-202ENST00000562542 FCRL2Q96LA5 508 aaPredicted RBP18.96■□□□□ 0.63
KATNB1-202ENST00000562542 ZNF396Q96N95 335 aaPredicted RBP18.96■□□□□ 0.63
KATNB1-202ENST00000562542 MTMR6Q9Y217 621 aa18.96■□□□□ 0.63
KATNB1-202ENST00000562542 BNIP3LO60238 219 aa18.95■□□□□ 0.62
KATNB1-202ENST00000562542 LZTS3O60299 673 aaPredicted RBP18.95■□□□□ 0.62
KATNB1-202ENST00000562542 GJB6O95452 261 aa18.95■□□□□ 0.62
KATNB1-202ENST00000562542 MXI1P50539 228 aa18.95■□□□□ 0.62
KATNB1-202ENST00000562542 CLDN2P57739 230 aa18.95■□□□□ 0.62
KATNB1-202ENST00000562542 HNRNPKP61978 463 aaKnown RBP eCLIP18.95■□□□□ 0.62
KATNB1-202ENST00000562542 ZCCHC8Q6NZY4 707 aaKnown RBP18.95■□□□□ 0.62
KATNB1-202ENST00000562542 GUSBP11Q6P575 273 aa18.95■□□□□ 0.62
KATNB1-202ENST00000562542 CHSY1Q86X52 802 aa18.95■□□□□ 0.62
KATNB1-202ENST00000562542 SCML4Q8N228 414 aa18.95■□□□□ 0.62
KATNB1-202ENST00000562542 FBXL13Q8NEE6 735 aa18.95■□□□□ 0.62
KATNB1-202ENST00000562542 WDR36Q8NI36 951 aaKnown RBP18.95■□□□□ 0.62
KATNB1-202ENST00000562542 FRS2Q8WU20 508 aa18.95■□□□□ 0.62
KATNB1-202ENST00000562542 EXTL1Q92935 676 aa18.95■□□□□ 0.62
KATNB1-202ENST00000562542 PRR11Q96HE9 360 aaPredicted RBP18.95■□□□□ 0.62
KATNB1-202ENST00000562542 SERPINB11Q96P15 392 aa18.95■□□□□ 0.62
KATNB1-202ENST00000562542 SYNDIG1Q9H7V2 258 aa18.95■□□□□ 0.62
KATNB1-202ENST00000562542 UPF2Q9HAU5 1272 aaKnown RBP18.95■□□□□ 0.62
KATNB1-202ENST00000562542 STARD5Q9NSY2 213 aa18.95■□□□□ 0.62
KATNB1-202ENST00000562542 RAB20Q9NX57 234 aa18.95■□□□□ 0.62
KATNB1-202ENST00000562542 NCKIPSDQ9NZQ3 722 aa18.95■□□□□ 0.62
KATNB1-202ENST00000562542 ATXN7L1Q9ULK2 861 aaPredicted RBP18.95■□□□□ 0.62
KATNB1-202ENST00000562542 HNRNPA2B1P22626 353 aaKnown RBP18.94■□□□□ 0.62
KATNB1-202ENST00000562542 GTF2H1P32780 548 aa18.94■□□□□ 0.62
KATNB1-202ENST00000562542 PSMC2P35998 433 aaKnown RBP18.94■□□□□ 0.62
KATNB1-202ENST00000562542 LINC00303Q3SY05 128 aa18.94■□□□□ 0.62
KATNB1-202ENST00000562542 RAP1GAP2Q684P5 730 aa18.94■□□□□ 0.62
KATNB1-202ENST00000562542 XKR5Q6UX68 686 aa18.94■□□□□ 0.62
KATNB1-202ENST00000562542 PTAR1Q7Z6K3 402 aaPredicted RBP18.94■□□□□ 0.62
KATNB1-202ENST00000562542 SLC22A18ASQ8N1D0 253 aa18.94■□□□□ 0.62
KATNB1-202ENST00000562542 IFT43Q96FT9 208 aa18.94■□□□□ 0.62
KATNB1-202ENST00000562542 NOX5Q96PH1 765 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms