RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 TCN1P20061 433 aaPredicted RBP14.26□□□□□ -0.13
VPS9D1-202ENST00000561976 CCR10P46092 362 aa14.26□□□□□ -0.13
VPS9D1-202ENST00000561976 INHBCP55103 352 aa14.26□□□□□ -0.13
VPS9D1-202ENST00000561976 MYBPC1Q00872 1141 aa14.26□□□□□ -0.13
VPS9D1-202ENST00000561976 AMHR2Q16671 573 aa14.26□□□□□ -0.13
VPS9D1-202ENST00000561976 ZNF423Q2M1K9 1284 aa14.26□□□□□ -0.13
VPS9D1-202ENST00000561976 CELF3Q5SZQ8 465 aaKnown RBP14.26□□□□□ -0.13
VPS9D1-202ENST00000561976 SLC26A9Q7LBE3 791 aa14.26□□□□□ -0.13
VPS9D1-202ENST00000561976 AHI1Q8N157 1196 aa14.26□□□□□ -0.13
VPS9D1-202ENST00000561976 ADCY4Q8NFM4 1077 aa14.26□□□□□ -0.13
VPS9D1-202ENST00000561976 ZFP28Q8NHY6 868 aa14.26□□□□□ -0.13
VPS9D1-202ENST00000561976 CENPIQ92674 756 aaPredicted RBP14.26□□□□□ -0.13
VPS9D1-202ENST00000561976 COPS5Q92905 334 aa14.26□□□□□ -0.13
VPS9D1-202ENST00000561976 MARK4Q96L34 752 aa14.26□□□□□ -0.13
VPS9D1-202ENST00000561976 PRDM12Q9H4Q4 367 aa14.26□□□□□ -0.13
VPS9D1-202ENST00000561976 TASP1Q9H6P5 420 aa14.26□□□□□ -0.13
VPS9D1-202ENST00000561976 GALNT8Q9NY28 637 aa14.26□□□□□ -0.13
VPS9D1-202ENST00000561976 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.26□□□□□ -0.13
VPS9D1-202ENST00000561976 KLHL8Q9P2G9 620 aaPredicted RBP14.26□□□□□ -0.13
VPS9D1-202ENST00000561976 RIMS3Q9UJD0 308 aa14.26□□□□□ -0.13
VPS9D1-202ENST00000561976 KCNK1O00180 336 aa14.25□□□□□ -0.13
VPS9D1-202ENST00000561976 H2AFYO75367 372 aaKnown RBP14.25□□□□□ -0.13
VPS9D1-202ENST00000561976 RPL14P50914 215 aaKnown RBP14.25□□□□□ -0.13
VPS9D1-202ENST00000561976 MS4A2Q01362 244 aa14.25□□□□□ -0.13
VPS9D1-202ENST00000561976 PDK1Q15118 436 aa14.25□□□□□ -0.13
VPS9D1-202ENST00000561976 MYLK3Q32MK0 819 aa14.25□□□□□ -0.13
VPS9D1-202ENST00000561976 PIGGQ5H8A4 983 aa14.25□□□□□ -0.13
VPS9D1-202ENST00000561976 FAM149B1Q96BN6 582 aa14.25□□□□□ -0.13
VPS9D1-202ENST00000561976 SCYL1Q96KG9 808 aa14.25□□□□□ -0.13
VPS9D1-202ENST00000561976 PKP2Q99959 881 aa14.25□□□□□ -0.13
VPS9D1-202ENST00000561976 C11orf84Q9BUA3 381 aaPredicted RBP14.25□□□□□ -0.13
VPS9D1-202ENST00000561976 MRPL1Q9BYD6 325 aaKnown RBP14.25□□□□□ -0.13
VPS9D1-202ENST00000561976 SMARCAD1Q9H4L7 1026 aa14.25□□□□□ -0.13
VPS9D1-202ENST00000561976 WDR41Q9HAD4 459 aa14.25□□□□□ -0.13
VPS9D1-202ENST00000561976 TMPRSS4Q9NRS4 437 aa14.25□□□□□ -0.13
VPS9D1-202ENST00000561976 BFARQ9NZS9 450 aa14.25□□□□□ -0.13
VPS9D1-202ENST00000561976 RAP2CQ9Y3L5 183 aa14.25□□□□□ -0.13
VPS9D1-202ENST00000561976 GJA3Q9Y6H8 435 aa14.25□□□□□ -0.13
VPS9D1-202ENST00000561976 PTPRFP10586 1907 aa14.25□□□□□ -0.13
VPS9D1-202ENST00000561976 STX16-NPEPL1H3BU86 382 aa14.25□□□□□ -0.13
VPS9D1-202ENST00000561976 MATN2O00339 956 aa14.25□□□□□ -0.13
VPS9D1-202ENST00000561976 PIGNO95427 931 aa14.25□□□□□ -0.13
VPS9D1-202ENST00000561976 ME2P23368 584 aa14.25□□□□□ -0.13
VPS9D1-202ENST00000561976 PPARGP37231 505 aaPredicted RBP14.25□□□□□ -0.13
VPS9D1-202ENST00000561976 MAGEA12P43365 314 aa14.25□□□□□ -0.13
VPS9D1-202ENST00000561976 SULT1E1P49888 294 aa14.25□□□□□ -0.13
VPS9D1-202ENST00000561976 CEACAM7Q14002 265 aa14.25□□□□□ -0.13
VPS9D1-202ENST00000561976 PPP2R5DQ14738 602 aa14.25□□□□□ -0.13
VPS9D1-202ENST00000561976 TMEM198Q66K66 360 aa14.25□□□□□ -0.13
VPS9D1-202ENST00000561976 PAOXQ6QHF9 649 aa14.25□□□□□ -0.13
VPS9D1-202ENST00000561976 TMA16Q96EY4 203 aaKnown RBP14.25□□□□□ -0.13
VPS9D1-202ENST00000561976 TSNARE1Q96NA8 513 aa14.25□□□□□ -0.13
VPS9D1-202ENST00000561976 DPEP3Q9H4B8 488 aa14.25□□□□□ -0.13
VPS9D1-202ENST00000561976 SLC39A10Q9ULF5 831 aa14.25□□□□□ -0.13
VPS9D1-202ENST00000561976 VANGL2Q9ULK5 521 aa14.25□□□□□ -0.13
VPS9D1-202ENST00000561976 DMTF1Q9Y222 760 aa14.25□□□□□ -0.13
VPS9D1-202ENST00000561976 USP3Q9Y6I4 520 aa14.25□□□□□ -0.13
VPS9D1-202ENST00000561976 ARHGAP10A1A4S6 786 aa14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 PPEF2O14830 753 aa14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 HCRTO43612 131 aa14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 VTNP04004 478 aa14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 PDGFRBP09619 1106 aa14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 FAM200BP0CF97 657 aa14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 GRIA4P48058 902 aa14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 NUMBP49757 651 aa14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 SETD3Q86TU7 594 aaPredicted RBP14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 LILRA2Q8N149 483 aa14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 CNDP1Q96KN2 507 aa14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 ACE2Q9BYF1 805 aaPredicted RBP14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 ZNF696Q9H7X3 374 aa14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 OXSMQ9NWU1 459 aa14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 PLK2Q9NYY3 685 aa14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 TLK1Q9UKI8 766 aa14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 HES2Q9Y543 173 aa14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 EVPLQ92817 2033 aa14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 TK2O00142 265 aa14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 PGK2P07205 417 aa14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 GLRBP48167 497 aa14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 HSPA13P48723 471 aa14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 GLUD2P49448 558 aa14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 CDKL1Q00532 357 aa14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 MPP3Q13368 585 aa14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 ARL13AQ5H913 290 aaPredicted RBP14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 LBX2Q6XYB7 198 aa14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 PGAM4Q8N0Y7 254 aa14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 RNF139Q8WU17 664 aa14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 PDCD6IPQ8WUM4 868 aaKnown RBP14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 KBTBD7Q8WVZ9 684 aa14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 MFSD3Q96ES6 412 aa14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 C20orf96Q9NUD7 363 aaPredicted RBP14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 MID2Q9UJV3 735 aa14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 FZD10Q9ULW2 581 aa14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 CDYLQ9Y232 598 aa14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 NME7Q9Y5B8 376 aa14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 AK5Q9Y6K8 562 aa14.24□□□□□ -0.13
VPS9D1-202ENST00000561976 GOLGA8TH3BQL2 631 aa14.23□□□□□ -0.13
VPS9D1-202ENST00000561976 PFDN1O60925 122 aa14.23□□□□□ -0.13
VPS9D1-202ENST00000561976 STAU1O95793 577 aaKnown RBP14.23□□□□□ -0.13
VPS9D1-202ENST00000561976 TFEBP19484 476 aa14.23□□□□□ -0.13
VPS9D1-202ENST00000561976 GMPSP49915 693 aaPredicted RBP14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms