RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 ERCC2P18074 760 aa7.73□□□□□ -1.17
TPM1-231ENST00000561395 RBL1P28749 1068 aa7.73□□□□□ -1.17
TPM1-231ENST00000561395 STIP1P31948 543 aaKnown RBP7.73□□□□□ -1.17
TPM1-231ENST00000561395 RPL22P35268 128 aaKnown RBP7.73□□□□□ -1.17
TPM1-231ENST00000561395 CHKAP35790 457 aa7.73□□□□□ -1.17
TPM1-231ENST00000561395 HSD17B3P37058 310 aa7.73□□□□□ -1.17
TPM1-231ENST00000561395 ALDH1A3P47895 512 aa7.73□□□□□ -1.17
TPM1-231ENST00000561395 TBX4P57082 545 aa7.73□□□□□ -1.17
TPM1-231ENST00000561395 NRG1Q02297 640 aaPredicted RBP7.73□□□□□ -1.17
TPM1-231ENST00000561395 DHX9Q08211 1270 aaKnown RBP7.73□□□□□ -1.17
TPM1-231ENST00000561395 EFEMP1Q12805 493 aa7.73□□□□□ -1.17
TPM1-231ENST00000561395 SLMAPQ14BN4 828 aa7.73□□□□□ -1.17
TPM1-231ENST00000561395 MORF4L2Q15014 288 aa7.73□□□□□ -1.17
TPM1-231ENST00000561395 PRKD1Q15139 912 aaPredicted RBP7.73□□□□□ -1.17
TPM1-231ENST00000561395 C10orf120Q5SQS8 335 aa7.73□□□□□ -1.17
TPM1-231ENST00000561395 ARTNQ5T4W7 220 aa7.73□□□□□ -1.17
TPM1-231ENST00000561395 CFAP58Q5T655 872 aa7.73□□□□□ -1.17
TPM1-231ENST00000561395 RNASEH2BQ5TBB1 312 aaKnown RBP7.73□□□□□ -1.17
TPM1-231ENST00000561395 SNX30Q5VWJ9 437 aa7.73□□□□□ -1.17
TPM1-231ENST00000561395 B4GALNT4Q76KP1 1039 aa7.73□□□□□ -1.17
TPM1-231ENST00000561395 BZW1Q7L1Q6 419 aaKnown RBP7.73□□□□□ -1.17
TPM1-231ENST00000561395 GPR149Q86SP6 731 aa7.73□□□□□ -1.17
TPM1-231ENST00000561395 PARP9Q8IXQ6 854 aa7.73□□□□□ -1.17
TPM1-231ENST00000561395 TCEAL8Q8IYN2 117 aa7.73□□□□□ -1.17
TPM1-231ENST00000561395 MAML2Q8IZL2 1156 aaPredicted RBP7.73□□□□□ -1.17
TPM1-231ENST00000561395 KRT222Q8N1A0 295 aa7.73□□□□□ -1.17
TPM1-231ENST00000561395 ZNF276Q8N554 614 aa7.73□□□□□ -1.17
TPM1-231ENST00000561395 ZCCHC9Q8N567 271 aaKnown RBP7.73□□□□□ -1.17
TPM1-231ENST00000561395 PDZD8Q8NEN9 1154 aa7.73□□□□□ -1.17
TPM1-231ENST00000561395 PJA1Q8NG27 643 aa7.73□□□□□ -1.17
TPM1-231ENST00000561395 TRMT2BQ96GJ1 504 aaKnown RBP7.73□□□□□ -1.17
TPM1-231ENST00000561395 FCRL2Q96LA5 508 aaPredicted RBP7.73□□□□□ -1.17
TPM1-231ENST00000561395 CDK5RAP1Q96SZ6 601 aaKnown RBP7.73□□□□□ -1.17
TPM1-231ENST00000561395 FOXP3Q9BZS1 431 aa7.73□□□□□ -1.17
TPM1-231ENST00000561395 TSPYL1Q9H0U9 437 aa7.73□□□□□ -1.17
TPM1-231ENST00000561395 SFXN1Q9H9B4 322 aa7.73□□□□□ -1.17
TPM1-231ENST00000561395 ARHGEF3Q9NR81 526 aa7.73□□□□□ -1.17
TPM1-231ENST00000561395 TPX2Q9ULW0 747 aaKnown RBP7.73□□□□□ -1.17
TPM1-231ENST00000561395 MAGED2Q9UNF1 606 aaPredicted RBP7.73□□□□□ -1.17
TPM1-231ENST00000561395 SHOC2Q9UQ13 582 aa7.73□□□□□ -1.17
TPM1-231ENST00000561395 SSX2IPQ9Y2D8 614 aa7.73□□□□□ -1.17
TPM1-231ENST00000561395 ATP8A1Q9Y2Q0 1164 aa7.73□□□□□ -1.17
TPM1-231ENST00000561395 RAD54BQ9Y620 910 aa7.73□□□□□ -1.17
TPM1-231ENST00000561395 DOCK4Q8N1I0 1966 aa7.73□□□□□ -1.17
TPM1-231ENST00000561395 DENND4CQ5VZ89 1909 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 ZNF840PA6NDX5 716 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 H3BQF6 201 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 AGPSO00116 658 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 PRRG1O14668 218 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 PPP1R12AO14974 1030 aaPredicted RBP7.72□□□□□ -1.17
TPM1-231ENST00000561395 FGF10O15520 208 aaPredicted RBP7.72□□□□□ -1.17
TPM1-231ENST00000561395 TLR5O60602 858 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 ZNF189O75820 626 aaPredicted RBP7.72□□□□□ -1.17
TPM1-231ENST00000561395 TBX18O95935 607 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 APOEP02649 317 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 NUDT7P0C024 238 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 SRFP11831 508 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 VAV1P15498 845 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 EPHB2P29323 1055 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 ELF1P32519 619 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 SERPINB6P35237 376 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 GGCXP38435 758 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 NRLP54845 237 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 RING1Q06587 406 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 TWF1Q12792 350 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 GPS2Q13227 327 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 VEPH1Q14D04 833 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 PDK1Q15118 436 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 ZNF528Q3MIS6 628 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 PIK3R6Q5UE93 754 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 LRIG3Q6UXM1 1119 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 CEP128Q6ZU80 1094 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 PDZD4Q76G19 769 aaPredicted RBP7.72□□□□□ -1.17
TPM1-231ENST00000561395 PCGF5Q86SE9 256 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 TADA2BQ86TJ2 420 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 HOOK3Q86VS8 718 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 CCDC25Q86WR0 208 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 PPIL6Q8IXY8 311 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 IQCKQ8N0W5 287 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 NPWQ8N729 165 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 SLC22A17Q8WUG5 538 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 TFB1MQ8WVM0 346 aaKnown RBP7.72□□□□□ -1.17
TPM1-231ENST00000561395 PRCCQ92733 491 aaPredicted RBP7.72□□□□□ -1.17
TPM1-231ENST00000561395 TBC1D31Q96DN5 1066 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 MYRFLQ96LU7 910 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 ZIM3Q96PE6 472 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 RUFY1Q96T51 708 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 SH3GL2Q99962 352 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 EMILIN2Q9BXX0 1053 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 FOXQ1Q9C009 403 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 SIK2Q9H0K1 926 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 EPB41L4BQ9H329 900 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 CCSER2Q9H7U1 834 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 PARD6AQ9NPB6 346 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 MED4Q9NPJ6 270 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 MARCH2Q9P0N8 246 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 PAK5Q9P286 719 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 ANGPTL2Q9UKU9 493 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 PLAAQ9Y263 795 aa7.72□□□□□ -1.17
TPM1-231ENST00000561395 HBS1LQ9Y450 684 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms