RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 ATP9BO43861 1147 aa16.68■□□□□ 0.26
SNX1-213ENST00000561026 CLDN11O75508 207 aa16.68■□□□□ 0.26
SNX1-213ENST00000561026 CYP11B1P15538 503 aa16.68■□□□□ 0.26
SNX1-213ENST00000561026 CDH5P33151 784 aaPredicted RBP16.68■□□□□ 0.26
SNX1-213ENST00000561026 GGCXP38435 758 aa16.68■□□□□ 0.26
SNX1-213ENST00000561026 CXCR3P49682 368 aa16.68■□□□□ 0.26
SNX1-213ENST00000561026 CCT8P50990 548 aa16.68■□□□□ 0.26
SNX1-213ENST00000561026 ADPRHP54922 357 aa16.68■□□□□ 0.26
SNX1-213ENST00000561026 RNASE9P60153 205 aaKnown RBP16.68■□□□□ 0.26
SNX1-213ENST00000561026 KCNMA1Q12791 1236 aa16.68■□□□□ 0.26
SNX1-213ENST00000561026 RAPGEF1Q13905 1077 aa16.68■□□□□ 0.26
SNX1-213ENST00000561026 KLHDC7AQ5VTJ3 777 aa16.68■□□□□ 0.26
SNX1-213ENST00000561026 CCNI2Q6ZMN8 369 aaPredicted RBP16.68■□□□□ 0.26
SNX1-213ENST00000561026 C14orf80Q86SX3 495 aa16.68■□□□□ 0.26
SNX1-213ENST00000561026 NT5C3BQ969T7 300 aa16.68■□□□□ 0.26
SNX1-213ENST00000561026 SKA1Q96BD8 255 aa16.68■□□□□ 0.26
SNX1-213ENST00000561026 SIK2Q9H0K1 926 aa16.68■□□□□ 0.26
SNX1-213ENST00000561026 WDCPQ9H6R7 721 aa16.68■□□□□ 0.26
SNX1-213ENST00000561026 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.68■□□□□ 0.26
SNX1-213ENST00000561026 DACH1Q9UI36 760 aa16.68■□□□□ 0.26
SNX1-213ENST00000561026 TPX2Q9ULW0 747 aaKnown RBP16.68■□□□□ 0.26
SNX1-213ENST00000561026 TBC1D30Q9Y2I9 924 aa16.68■□□□□ 0.26
SNX1-213ENST00000561026 PKD1L2Q7Z442 2459 aa16.68■□□□□ 0.26
SNX1-213ENST00000561026 DKK1O94907 266 aa16.67■□□□□ 0.26
SNX1-213ENST00000561026 ADCY5O95622 1261 aa16.67■□□□□ 0.26
SNX1-213ENST00000561026 CAPNS1P04632 268 aa16.67■□□□□ 0.26
SNX1-213ENST00000561026 ATXN1LP0C7T5 689 aaKnown RBP16.67■□□□□ 0.26
SNX1-213ENST00000561026 TFE3P19532 575 aaPredicted RBP16.67■□□□□ 0.26
SNX1-213ENST00000561026 DRD3P35462 400 aa16.67■□□□□ 0.26
SNX1-213ENST00000561026 GRK6P43250 576 aa16.67■□□□□ 0.26
SNX1-213ENST00000561026 GABRB2P47870 512 aa16.67■□□□□ 0.26
SNX1-213ENST00000561026 CDH4P55283 916 aa16.67■□□□□ 0.26
SNX1-213ENST00000561026 ACCSLQ4AC99 568 aa16.67■□□□□ 0.26
SNX1-213ENST00000561026 BRMS1LQ5PSV4 323 aa16.67■□□□□ 0.26
SNX1-213ENST00000561026 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.67■□□□□ 0.26
SNX1-213ENST00000561026 DSG4Q86SJ6 1040 aa16.67■□□□□ 0.26
SNX1-213ENST00000561026 FAM131CQ96AQ9 280 aa16.67■□□□□ 0.26
SNX1-213ENST00000561026 C18orf8Q96DM3 657 aa16.67■□□□□ 0.26
SNX1-213ENST00000561026 PGAP3Q96FM1 320 aaPredicted RBP16.67■□□□□ 0.26
SNX1-213ENST00000561026 NAA15Q9BXJ9 866 aaKnown RBP16.67■□□□□ 0.26
SNX1-213ENST00000561026 TKTL2Q9H0I9 626 aa16.67■□□□□ 0.26
SNX1-213ENST00000561026 PDCL3Q9H2J4 239 aa16.67■□□□□ 0.26
SNX1-213ENST00000561026 ANLNQ9NQW6 1124 aa16.67■□□□□ 0.26
SNX1-213ENST00000561026 AASDHPPTQ9NRN7 309 aa16.67■□□□□ 0.26
SNX1-213ENST00000561026 ARHGEF38Q9NXL2 777 aa16.67■□□□□ 0.26
SNX1-213ENST00000561026 SLC25A13Q9UJS0 675 aa16.67■□□□□ 0.26
SNX1-213ENST00000561026 VPS28Q9UK41 221 aa16.67■□□□□ 0.26
SNX1-213ENST00000561026 STAP1Q9ULZ2 295 aa16.67■□□□□ 0.26
SNX1-213ENST00000561026 FHOD1Q9Y613 1164 aa16.67■□□□□ 0.26
SNX1-213ENST00000561026 FAM208BQ5VWN6 2430 aa16.67■□□□□ 0.26
SNX1-213ENST00000561026 TBC1D3DA0A087WVF3 549 aa16.66■□□□□ 0.26
SNX1-213ENST00000561026 TBC1D3IA0A087WXS9 549 aa16.66■□□□□ 0.26
SNX1-213ENST00000561026 TBC1D3EA0A087X179 549 aa16.66■□□□□ 0.26
SNX1-213ENST00000561026 TBC1D3KA0A087X1G2 549 aa16.66■□□□□ 0.26
SNX1-213ENST00000561026 A0A1B0GTQ1 180 aa16.66■□□□□ 0.26
SNX1-213ENST00000561026 TBC1D3FA6NER0 549 aaPredicted RBP16.66■□□□□ 0.26
SNX1-213ENST00000561026 TBC1D3LB9A6J9 549 aa16.66■□□□□ 0.26
SNX1-213ENST00000561026 I6L893 689 aaPredicted RBP16.66■□□□□ 0.26
SNX1-213ENST00000561026 WNT9AO14904 365 aa16.66■□□□□ 0.26
SNX1-213ENST00000561026 TNFSF14O43557 240 aa16.66■□□□□ 0.26
SNX1-213ENST00000561026 LATO43561 262 aa16.66■□□□□ 0.26
SNX1-213ENST00000561026 F9P00740 461 aa16.66■□□□□ 0.26
SNX1-213ENST00000561026 WNT1P04628 370 aa16.66■□□□□ 0.26
SNX1-213ENST00000561026 TBC1D3HP0C7X1 549 aa16.66■□□□□ 0.26
SNX1-213ENST00000561026 SCNN1AP37088 669 aa16.66■□□□□ 0.26
SNX1-213ENST00000561026 METAP1P53582 386 aa16.66■□□□□ 0.26
SNX1-213ENST00000561026 DLG2Q15700 870 aa16.66■□□□□ 0.26
SNX1-213ENST00000561026 TBC1D3GQ6DHY5 549 aa16.66■□□□□ 0.26
SNX1-213ENST00000561026 TBC1D3CQ6IPX1 549 aa16.66■□□□□ 0.26
SNX1-213ENST00000561026 ERICH1Q86X53 443 aa16.66■□□□□ 0.26
SNX1-213ENST00000561026 TBC1D3Q8IZP1 549 aaPredicted RBP16.66■□□□□ 0.26
SNX1-213ENST00000561026 OR8D1Q8WZ84 308 aa16.66■□□□□ 0.26
SNX1-213ENST00000561026 NUP62CLQ9H1M0 184 aa16.66■□□□□ 0.26
SNX1-213ENST00000561026 KDM4CQ9H3R0 1056 aa16.66■□□□□ 0.26
SNX1-213ENST00000561026 SAMSN1Q9NSI8 373 aaKnown RBP16.66■□□□□ 0.26
SNX1-213ENST00000561026 TMEM51Q9NW97 253 aa16.66■□□□□ 0.26
SNX1-213ENST00000561026 SARDHQ9UL12 918 aa16.66■□□□□ 0.26
SNX1-213ENST00000561026 PPM1HQ9ULR3 514 aa16.66■□□□□ 0.26
SNX1-213ENST00000561026 DSPP15924 2871 aaKnown RBP16.65■□□□□ 0.26
SNX1-213ENST00000561026 A0A1W2PR77 199 aa16.65■□□□□ 0.26
SNX1-213ENST00000561026 PES1O00541 588 aaKnown RBP16.65■□□□□ 0.26
SNX1-213ENST00000561026 MCF2LO15068 1137 aa16.65■□□□□ 0.26
SNX1-213ENST00000561026 SLC7A4O43246 635 aa16.65■□□□□ 0.26
SNX1-213ENST00000561026 CNTN5O94779 1100 aa16.65■□□□□ 0.26
SNX1-213ENST00000561026 UCHL3P15374 230 aa16.65■□□□□ 0.26
SNX1-213ENST00000561026 CD38P28907 300 aa16.65■□□□□ 0.26
SNX1-213ENST00000561026 SULT1E1P49888 294 aa16.65■□□□□ 0.26
SNX1-213ENST00000561026 IL9RQ01113 521 aa16.65■□□□□ 0.26
SNX1-213ENST00000561026 SCAPQ12770 1279 aa16.65■□□□□ 0.26
SNX1-213ENST00000561026 SLC25A52Q3SY17 297 aa16.65■□□□□ 0.26
SNX1-213ENST00000561026 ALFQ53S48 1182 aa16.65■□□□□ 0.26
SNX1-213ENST00000561026 TCP11X2Q5H9J9 407 aa16.65■□□□□ 0.26
SNX1-213ENST00000561026 CT47A1Q5JQC4 288 aaPredicted RBP16.65■□□□□ 0.26
SNX1-213ENST00000561026 PRAMEF14Q5SWL7 426 aa16.65■□□□□ 0.26
SNX1-213ENST00000561026 FAM46CQ5VWP2 391 aa16.65■□□□□ 0.26
SNX1-213ENST00000561026 TMPRSS7Q7RTY8 843 aa16.65■□□□□ 0.26
SNX1-213ENST00000561026 XYLT1Q86Y38 959 aa16.65■□□□□ 0.26
SNX1-213ENST00000561026 ZNF683Q8IZ20 524 aa16.65■□□□□ 0.26
SNX1-213ENST00000561026 SH2D3CQ8N5H7 860 aa16.65■□□□□ 0.26
SNX1-213ENST00000561026 SERAC1Q96JX3 654 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms