RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 SUN2Q9UH99 717 aa12.41□□□□□ -0.42
USP8-212ENST00000560730 VPS28Q9UK41 221 aa12.41□□□□□ -0.42
USP8-212ENST00000560730 CYP8B1Q9UNU6 501 aa12.41□□□□□ -0.42
USP8-212ENST00000560730 TNRC6BQ9UPQ9 1833 aaKnown RBP12.41□□□□□ -0.42
USP8-212ENST00000560730 IGHV1OR15-9A0A0B4J2B8 117 aa12.4□□□□□ -0.42
USP8-212ENST00000560730 SSU72P8A0A1W2PR75 194 aa12.4□□□□□ -0.42
USP8-212ENST00000560730 ZBTB24O43167 697 aaPredicted RBP12.4□□□□□ -0.42
USP8-212ENST00000560730 SIN3BO75182 1162 aa12.4□□□□□ -0.42
USP8-212ENST00000560730 MT-CO1P00395 513 aa12.4□□□□□ -0.42
USP8-212ENST00000560730 SRPRAP08240 638 aaKnown RBP12.4□□□□□ -0.42
USP8-212ENST00000560730 TCF4P15884 667 aa12.4□□□□□ -0.42
USP8-212ENST00000560730 RHOQP17081 205 aa12.4□□□□□ -0.42
USP8-212ENST00000560730 GLDCP23378 1020 aa12.4□□□□□ -0.42
USP8-212ENST00000560730 MIPP30301 263 aa12.4□□□□□ -0.42
USP8-212ENST00000560730 L1CAMP32004 1257 aa12.4□□□□□ -0.42
USP8-212ENST00000560730 SEMA3BQ13214 749 aa12.4□□□□□ -0.42
USP8-212ENST00000560730 HNRNPA1L2Q32P51 320 aaKnown RBP12.4□□□□□ -0.42
USP8-212ENST00000560730 EFHC2Q5JST6 749 aa12.4□□□□□ -0.42
USP8-212ENST00000560730 C9orf64Q5T6V5 341 aa12.4□□□□□ -0.42
USP8-212ENST00000560730 DEFB119Q8N690 84 aa12.4□□□□□ -0.42
USP8-212ENST00000560730 KDM1BQ8NB78 822 aa12.4□□□□□ -0.42
USP8-212ENST00000560730 OR2T3Q8NH03 318 aa12.4□□□□□ -0.42
USP8-212ENST00000560730 FRS2Q8WU20 508 aa12.4□□□□□ -0.42
USP8-212ENST00000560730 TBC1D31Q96DN5 1066 aa12.4□□□□□ -0.42
USP8-212ENST00000560730 SIPA1Q96FS4 1042 aa12.4□□□□□ -0.42
USP8-212ENST00000560730 HINFPQ9BQA5 517 aa12.4□□□□□ -0.42
USP8-212ENST00000560730 NHEJ1Q9H9Q4 299 aaPredicted RBP12.4□□□□□ -0.42
USP8-212ENST00000560730 MRPL47Q9HD33 250 aaKnown RBP12.4□□□□□ -0.42
USP8-212ENST00000560730 PARD6AQ9NPB6 346 aa12.4□□□□□ -0.42
USP8-212ENST00000560730 VPS51Q9UID3 782 aa12.4□□□□□ -0.42
USP8-212ENST00000560730 FRYLO94915 3013 aa12.39□□□□□ -0.43
USP8-212ENST00000560730 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.39□□□□□ -0.43
USP8-212ENST00000560730 ILVBLA1L0T0 632 aa12.39□□□□□ -0.43
USP8-212ENST00000560730 CREB3O43889 395 aa12.39□□□□□ -0.43
USP8-212ENST00000560730 AKR1B10O60218 316 aa12.39□□□□□ -0.43
USP8-212ENST00000560730 LRCH4O75427 683 aa12.39□□□□□ -0.43
USP8-212ENST00000560730 RNF8O76064 485 aa12.39□□□□□ -0.43
USP8-212ENST00000560730 RETP07949 1114 aa12.39□□□□□ -0.43
USP8-212ENST00000560730 TGM1P22735 817 aa12.39□□□□□ -0.43
USP8-212ENST00000560730 IL1R2P27930 398 aa12.39□□□□□ -0.43
USP8-212ENST00000560730 ACVRL1P37023 503 aa12.39□□□□□ -0.43
USP8-212ENST00000560730 RPS14P62263 151 aaKnown RBP12.39□□□□□ -0.43
USP8-212ENST00000560730 SULT2A1Q06520 285 aa12.39□□□□□ -0.43
USP8-212ENST00000560730 SPEM2Q0P670 501 aa12.39□□□□□ -0.43
USP8-212ENST00000560730 CCDC6Q16204 474 aa12.39□□□□□ -0.43
USP8-212ENST00000560730 C6orf118Q5T5N4 469 aa12.39□□□□□ -0.43
USP8-212ENST00000560730 PMS2CLQ68D20 193 aa12.39□□□□□ -0.43
USP8-212ENST00000560730 LINGO4Q6UY18 593 aa12.39□□□□□ -0.43
USP8-212ENST00000560730 CPNE8Q86YQ8 564 aa12.39□□□□□ -0.43
USP8-212ENST00000560730 CNGA4Q8IV77 575 aa12.39□□□□□ -0.43
USP8-212ENST00000560730 TMEFF1Q8IYR6 380 aa12.39□□□□□ -0.43
USP8-212ENST00000560730 PTPRN2Q92932 1015 aa12.39□□□□□ -0.43
USP8-212ENST00000560730 MRFAP1L1Q96HT8 127 aa12.39□□□□□ -0.43
USP8-212ENST00000560730 FAM129BQ96TA1 746 aa12.39□□□□□ -0.43
USP8-212ENST00000560730 SPON2Q9BUD6 331 aa12.39□□□□□ -0.43
USP8-212ENST00000560730 SNRNP25Q9BV90 132 aaKnown RBP12.39□□□□□ -0.43
USP8-212ENST00000560730 ARRDC1-AS1Q9H2J1 176 aa12.39□□□□□ -0.43
USP8-212ENST00000560730 DEF6Q9H4E7 631 aa12.39□□□□□ -0.43
USP8-212ENST00000560730 ITM2CQ9NQX7 267 aa12.39□□□□□ -0.43
USP8-212ENST00000560730 TMEM248Q9NWD8 314 aa12.39□□□□□ -0.43
USP8-212ENST00000560730 USP36Q9P275 1121 aaKnown RBP12.39□□□□□ -0.43
USP8-212ENST00000560730 DNAI1Q9UI46 699 aa12.39□□□□□ -0.43
USP8-212ENST00000560730 ANAPC7Q9UJX3 599 aa12.39□□□□□ -0.43
USP8-212ENST00000560730 GMEB2Q9UKD1 530 aa12.39□□□□□ -0.43
USP8-212ENST00000560730 AP4E1Q9UPM8 1137 aa12.39□□□□□ -0.43
USP8-212ENST00000560730 ACTL7AQ9Y615 435 aa12.39□□□□□ -0.43
USP8-212ENST00000560730 EDDM13A0A1B0GTR0 161 aa12.38□□□□□ -0.43
USP8-212ENST00000560730 K7ERQ8 282 aa12.38□□□□□ -0.43
USP8-212ENST00000560730 MAP3K13O43283 966 aa12.38□□□□□ -0.43
USP8-212ENST00000560730 SMAD6O43541 496 aaKnown RBP12.38□□□□□ -0.43
USP8-212ENST00000560730 ZNF217O75362 1048 aa12.38□□□□□ -0.43
USP8-212ENST00000560730 ZMPSTE24O75844 475 aa12.38□□□□□ -0.43
USP8-212ENST00000560730 EPN2O95208 641 aa12.38□□□□□ -0.43
USP8-212ENST00000560730 DESP17661 470 aa12.38□□□□□ -0.43
USP8-212ENST00000560730 EPHB2P29323 1055 aa12.38□□□□□ -0.43
USP8-212ENST00000560730 TPMTP51580 245 aa12.38□□□□□ -0.43
USP8-212ENST00000560730 AIF1P55008 147 aa12.38□□□□□ -0.43
USP8-212ENST00000560730 GNA12Q03113 381 aa12.38□□□□□ -0.43
USP8-212ENST00000560730 ELF2Q15723 593 aa12.38□□□□□ -0.43
USP8-212ENST00000560730 ACCSLQ4AC99 568 aa12.38□□□□□ -0.43
USP8-212ENST00000560730 ERMARDQ5T6L9 678 aa12.38□□□□□ -0.43
USP8-212ENST00000560730 TXNRD3NBQ6F5E7 133 aa12.38□□□□□ -0.43
USP8-212ENST00000560730 METTL3Q86U44 580 aaKnown RBP12.38□□□□□ -0.43
USP8-212ENST00000560730 STK40Q8N2I9 435 aa12.38□□□□□ -0.43
USP8-212ENST00000560730 PRCCQ92733 491 aaPredicted RBP12.38□□□□□ -0.43
USP8-212ENST00000560730 SPACA7Q96KW9 195 aa12.38□□□□□ -0.43
USP8-212ENST00000560730 CCDC42Q96M95 316 aa12.38□□□□□ -0.43
USP8-212ENST00000560730 PPP1R9BQ96SB3 815 aa12.38□□□□□ -0.43
USP8-212ENST00000560730 KCTD15Q96SI1 283 aaPredicted RBP12.38□□□□□ -0.43
USP8-212ENST00000560730 RSPH9Q9H1X1 276 aaPredicted RBP12.38□□□□□ -0.43
USP8-212ENST00000560730 DHX35Q9H5Z1 703 aaKnown RBP12.38□□□□□ -0.43
USP8-212ENST00000560730 NOL6Q9H6R4 1146 aaKnown RBP12.38□□□□□ -0.43
USP8-212ENST00000560730 SLC25A13Q9UJS0 675 aa12.38□□□□□ -0.43
USP8-212ENST00000560730 USP18Q9UMW8 372 aa12.38□□□□□ -0.43
USP8-212ENST00000560730 DOCK9Q9BZ29 2069 aa12.38□□□□□ -0.43
USP8-212ENST00000560730 TARSL2A2RTX5 802 aaKnown RBP12.37□□□□□ -0.43
USP8-212ENST00000560730 CBX4O00257 560 aa12.37□□□□□ -0.43
USP8-212ENST00000560730 ATP9BO43861 1147 aa12.37□□□□□ -0.43
USP8-212ENST00000560730 PRPSAP2O60256 369 aa12.37□□□□□ -0.43
USP8-212ENST00000560730 RHOBTB1O94844 696 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms