RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 PUM1Q14671 1186 aaKnown RBP eCLIP13.32□□□□□ -0.28
CTDSPL2-209ENST00000560620 C5orf22Q49AR2 442 aa13.32□□□□□ -0.28
CTDSPL2-209ENST00000560620 EFHC2Q5JST6 749 aa13.32□□□□□ -0.28
CTDSPL2-209ENST00000560620 BNIPLQ7Z465 357 aa13.32□□□□□ -0.28
CTDSPL2-209ENST00000560620 SYT12Q8IV01 421 aa13.32□□□□□ -0.28
CTDSPL2-209ENST00000560620 CCDC185Q8N715 623 aa13.32□□□□□ -0.28
CTDSPL2-209ENST00000560620 ATP11CQ8NB49 1132 aa13.32□□□□□ -0.28
CTDSPL2-209ENST00000560620 KDM1BQ8NB78 822 aa13.32□□□□□ -0.28
CTDSPL2-209ENST00000560620 NETO1Q8TDF5 533 aa13.32□□□□□ -0.28
CTDSPL2-209ENST00000560620 SNX19Q92543 992 aa13.32□□□□□ -0.28
CTDSPL2-209ENST00000560620 TRIM11Q96F44 468 aa13.32□□□□□ -0.28
CTDSPL2-209ENST00000560620 CNPY3Q9BT09 278 aa13.32□□□□□ -0.28
CTDSPL2-209ENST00000560620 SYT11Q9BT88 431 aa13.32□□□□□ -0.28
CTDSPL2-209ENST00000560620 NUSAP1Q9BXS6 441 aaKnown RBP13.32□□□□□ -0.28
CTDSPL2-209ENST00000560620 WSB2Q9NYS7 404 aaPredicted RBP13.32□□□□□ -0.28
CTDSPL2-209ENST00000560620 CNOT8Q9UFF9 292 aaKnown RBP13.32□□□□□ -0.28
CTDSPL2-209ENST00000560620 CAPN11Q9UMQ6 739 aa13.32□□□□□ -0.28
CTDSPL2-209ENST00000560620 TBC1D30Q9Y2I9 924 aa13.32□□□□□ -0.28
CTDSPL2-209ENST00000560620 DMXL1Q9Y485 3027 aa13.32□□□□□ -0.28
CTDSPL2-209ENST00000560620 IGLV3-10A0A075B6K4 115 aa13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 TARSL2A2RTX5 802 aaKnown RBP13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 FAM47DPA6NHR8 397 aa13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 CBX4O00257 560 aa13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 DDX3XO00571 662 aaKnown RBP eCLIP13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 CREB3O43889 395 aa13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 PLEKP08567 350 aaPredicted RBP13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 TPM1P09493 284 aa13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 GZMAP12544 262 aa13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 KCNA4P22459 653 aa13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 PSMA2P25787 234 aa13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 CASP14P31944 242 aa13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 PSMD8P48556 350 aa13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 RPS14P62263 151 aaKnown RBP13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 ZBTB16Q05516 673 aa13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 SFSWAPQ12872 951 aaKnown RBP13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 MAMLD1Q13495 774 aa13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 TRIM61Q5EBN2 209 aa13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 WDR45BQ5MNZ6 344 aa13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 C9orf64Q5T6V5 341 aa13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 IL31Q6EBC2 164 aa13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 TMC6Q7Z403 805 aa13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 ZNF354CQ86Y25 554 aa13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 MMAAQ8IVH4 418 aaKnown RBP13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 SLC41A1Q8IVJ1 513 aa13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 ZNF683Q8IZ20 524 aa13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 STK40Q8N2I9 435 aa13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 CENPIQ92674 756 aaPredicted RBP13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 TBC1D31Q96DN5 1066 aa13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 OMDQ99983 421 aa13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 EDEM2Q9BV94 578 aa13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 BTBD1Q9H0C5 482 aa13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 MIR1-1HGQ9H1L0 117 aa13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 RSPH9Q9H1X1 276 aaPredicted RBP13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 RXFP3Q9NSD7 469 aa13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 TMEM74BQ9NUR3 256 aa13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 ADAMTS1Q9UHI8 967 aa13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 SCINQ9Y6U3 715 aa13.31□□□□□ -0.28
CTDSPL2-209ENST00000560620 A0A0D9SEW6 157 aa13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 TCRBV5S1A1TA0A578 114 aa13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 SNAP91O60641 907 aa13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 RNASEH2AO75792 299 aaKnown RBP13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 RNF8O76064 485 aa13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 IL1BP01584 269 aa13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 GYPCP04921 128 aa13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 VAV1P15498 845 aa13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 GNSP15586 552 aa13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 MAOBP27338 520 aa13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 ATXN3P54252 364 aaPredicted RBP13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 IRX4P78413 519 aa13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 ELAVL3Q14576 367 aaKnown RBP13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 DLG2Q15700 870 aa13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 CST6Q15828 149 aa13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 TSR1Q2NL82 804 aaKnown RBP13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 PPP1R15BQ5SWA1 713 aa13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 SPECC1LQ69YQ0 1117 aa13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 LINGO4Q6UY18 593 aa13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 DGLUCYQ7Z3D6 616 aa13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 RABEPKQ7Z6M1 372 aa13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 PYROXD2Q8N2H3 581 aa13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 OR7D4Q8NG98 312 aa13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 CEP76Q8TAP6 659 aa13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 OR8D1Q8WZ84 308 aa13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 SYN2Q92777 582 aaPredicted RBP13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 ALG14Q96F25 216 aa13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 MAGEB5Q9BZ81 275 aa13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 OSBPL2Q9H1P3 480 aa13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 ATP13A1Q9HD20 1204 aa13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 MRPL47Q9HD33 250 aaKnown RBP13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 FBXL12Q9NXK8 326 aa13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 PPARGC1AQ9UBK2 798 aaKnown RBP13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 DNAI1Q9UI46 699 aa13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 VPS51Q9UID3 782 aa13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 PILRBQ9UKJ0 227 aa13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 SCML1Q9UN30 329 aa13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 FARP1Q9Y4F1 1045 aaPredicted RBP13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 ITIH6Q6UXX5 1313 aa13.3□□□□□ -0.28
CTDSPL2-209ENST00000560620 A0A1W2PP55 124 aa13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 LNP1A1A4G5 178 aa13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 ILVBLA1L0T0 632 aa13.29□□□□□ -0.28
CTDSPL2-209ENST00000560620 FAM72CH0Y354 149 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms