RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 DNAJC7Q99615 494 aa6.74□□□□□ -1.33
HERC1-208ENST00000560462 CMKLR1Q99788 373 aa6.74□□□□□ -1.33
HERC1-208ENST00000560462 DSCC1Q9BVC3 393 aa6.74□□□□□ -1.33
HERC1-208ENST00000560462 TARS2Q9BW92 718 aaKnown RBP6.74□□□□□ -1.33
HERC1-208ENST00000560462 CIPCQ9C0C6 399 aa6.74□□□□□ -1.33
HERC1-208ENST00000560462 GPN2Q9H9Y4 310 aaPredicted RBP6.74□□□□□ -1.33
HERC1-208ENST00000560462 FBXL12Q9NXK8 326 aa6.74□□□□□ -1.33
HERC1-208ENST00000560462 RGL1Q9NZL6 768 aa6.74□□□□□ -1.33
HERC1-208ENST00000560462 MARK1Q9P0L2 795 aa6.74□□□□□ -1.33
HERC1-208ENST00000560462 LUZP4Q9P127 313 aa6.74□□□□□ -1.33
HERC1-208ENST00000560462 TLK1Q9UKI8 766 aa6.74□□□□□ -1.33
HERC1-208ENST00000560462 SLC27A6Q9Y2P4 619 aa6.74□□□□□ -1.33
HERC1-208ENST00000560462 CKAP5Q14008 2032 aa6.73□□□□□ -1.33
HERC1-208ENST00000560462 SLC12A8A0AV02 714 aa6.73□□□□□ -1.33
HERC1-208ENST00000560462 KCNAB3O43448 404 aa6.73□□□□□ -1.33
HERC1-208ENST00000560462 LATO43561 262 aa6.73□□□□□ -1.33
HERC1-208ENST00000560462 KRT86O43790 486 aa6.73□□□□□ -1.33
HERC1-208ENST00000560462 EDIL3O43854 480 aa6.73□□□□□ -1.33
HERC1-208ENST00000560462 USO1O60763 962 aaKnown RBP6.73□□□□□ -1.33
HERC1-208ENST00000560462 F13A1P00488 732 aa6.73□□□□□ -1.33
HERC1-208ENST00000560462 NFKB1P19838 968 aa6.73□□□□□ -1.33
HERC1-208ENST00000560462 UGT1A3P35503 534 aa6.73□□□□□ -1.33
HERC1-208ENST00000560462 TNP2Q05952 138 aa6.73□□□□□ -1.33
HERC1-208ENST00000560462 SPAG1Q07617 926 aa6.73□□□□□ -1.33
HERC1-208ENST00000560462 CTTNQ14247 550 aaKnown RBP6.73□□□□□ -1.33
HERC1-208ENST00000560462 EIF4HQ15056 248 aaKnown RBP6.73□□□□□ -1.33
HERC1-208ENST00000560462 FXNQ16595 210 aa6.73□□□□□ -1.33
HERC1-208ENST00000560462 SPRED3Q2MJR0 410 aa6.73□□□□□ -1.33
HERC1-208ENST00000560462 ATP1A1-AS1Q5TC04 95 aa6.73□□□□□ -1.33
HERC1-208ENST00000560462 ZNF776Q68DI1 518 aaPredicted RBP6.73□□□□□ -1.33
HERC1-208ENST00000560462 CELF2-AS1Q8N7Q2 184 aa6.73□□□□□ -1.33
HERC1-208ENST00000560462 FAM169BQ8N8A8 192 aa6.73□□□□□ -1.33
HERC1-208ENST00000560462 ETNPPLQ8TBG4 499 aa6.73□□□□□ -1.33
HERC1-208ENST00000560462 SORCS1Q8WY21 1168 aa6.73□□□□□ -1.33
HERC1-208ENST00000560462 C19orf60Q96EN9 201 aa6.73□□□□□ -1.33
HERC1-208ENST00000560462 C14orf79Q96F83 325 aa6.73□□□□□ -1.33
HERC1-208ENST00000560462 KLHDC7BQ96G42 594 aa6.73□□□□□ -1.33
HERC1-208ENST00000560462 SMR3AQ99954 134 aa6.73□□□□□ -1.33
HERC1-208ENST00000560462 CXXC4Q9H2H0 198 aa6.73□□□□□ -1.33
HERC1-208ENST00000560462 PABPC3Q9H361 631 aaKnown RBP6.73□□□□□ -1.33
HERC1-208ENST00000560462 CAAP1Q9H8G2 361 aa6.73□□□□□ -1.33
HERC1-208ENST00000560462 ZBTB40Q9NUA8 1239 aa6.73□□□□□ -1.33
HERC1-208ENST00000560462 ELOVL2Q9NXB9 296 aa6.73□□□□□ -1.33
HERC1-208ENST00000560462 SERGEFQ9UGK8 458 aa6.73□□□□□ -1.33
HERC1-208ENST00000560462 SCML1Q9UN30 329 aa6.73□□□□□ -1.33
HERC1-208ENST00000560462 DIDO1Q9BTC0 2240 aaKnown RBP6.73□□□□□ -1.33
HERC1-208ENST00000560462 CNTNAP5Q8WYK1 1306 aa6.73□□□□□ -1.33
HERC1-208ENST00000560462 TLN2Q9Y4G6 2542 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 CCDC69A6NI79 296 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 C10orf142B7Z368 130 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 PPEF2O14830 753 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 KCNN4O15554 427 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 ANP32CO43423 234 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 PAGE1O75459 146 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 RNASEH2AO75792 299 aaKnown RBP6.72□□□□□ -1.33
HERC1-208ENST00000560462 F9P00740 461 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 ITGB3P05106 788 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 MCF2P10911 925 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 IRF1P10914 325 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 TCN2P20062 427 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 CYP3A5P20815 502 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 HTR1EP28566 365 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 NAMPTP43490 491 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 NOP2P46087 812 aaKnown RBP6.72□□□□□ -1.33
HERC1-208ENST00000560462 GUCY2FP51841 1108 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 PGDP52209 483 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 EFNA5P52803 228 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 MFAP3P55082 362 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 YBX1P67809 324 aaKnown RBP6.72□□□□□ -1.33
HERC1-208ENST00000560462 SLC10A6Q3KNW5 377 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 MIIPQ5JXC2 388 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 JMJD6Q6NYC1 403 aaPredicted RBP6.72□□□□□ -1.33
HERC1-208ENST00000560462 BNC2Q6ZN30 1099 aaPredicted RBP6.72□□□□□ -1.33
HERC1-208ENST00000560462 RD3Q7Z3Z2 195 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 PRPF39Q86UA1 669 aaKnown RBP6.72□□□□□ -1.33
HERC1-208ENST00000560462 RAB11FIP4Q86YS3 637 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 SLFN12Q8IYM2 578 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 ZNF366Q8N895 744 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 Q8NA96 180 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 FANCBQ8NB91 859 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 PANK1Q8TE04 598 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 CHTF18Q8WVB6 975 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 STARD8Q92502 1023 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 PTPRN2Q92932 1015 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 ZNF669Q96BR6 464 aaPredicted RBP6.72□□□□□ -1.33
HERC1-208ENST00000560462 DYDC2Q96IM9 177 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 PPP1R13BQ96KQ4 1090 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 RANBP9Q96S59 729 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 EFHD1Q9BUP0 239 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 IRX2Q9BZI1 471 aaPredicted RBP6.72□□□□□ -1.33
HERC1-208ENST00000560462 ZMYND12Q9H0C1 365 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 NEUROG2Q9H2A3 272 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 MCCC2Q9HCC0 563 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 ANKEF1Q9NU02 776 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.72□□□□□ -1.33
HERC1-208ENST00000560462 PLK2Q9NYY3 685 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 EHD2Q9NZN4 543 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 FBXO10Q9UK96 956 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 VAV3Q9UKW4 847 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 UBQLN1Q9UMX0 589 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms