RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 FFAR2O15552 330 aa9.63□□□□□ -0.87
SMAD3-215ENST00000560424 GJB6O95452 261 aa9.63□□□□□ -0.87
SMAD3-215ENST00000560424 HOXD9P28356 352 aaPredicted RBP9.63□□□□□ -0.87
SMAD3-215ENST00000560424 CYP2J2P51589 502 aa9.63□□□□□ -0.87
SMAD3-215ENST00000560424 UBXN1Q04323 297 aa9.63□□□□□ -0.87
SMAD3-215ENST00000560424 OVGP1Q12889 678 aa9.63□□□□□ -0.87
SMAD3-215ENST00000560424 PSMD6Q15008 389 aa9.63□□□□□ -0.87
SMAD3-215ENST00000560424 CST6Q15828 149 aa9.63□□□□□ -0.87
SMAD3-215ENST00000560424 CCDC40Q4G0X9 1142 aa9.63□□□□□ -0.87
SMAD3-215ENST00000560424 C4orf17Q53FE4 359 aa9.63□□□□□ -0.87
SMAD3-215ENST00000560424 SMYD5Q6GMV2 418 aa9.63□□□□□ -0.87
SMAD3-215ENST00000560424 CLEC20AQ6ZU45 233 aa9.63□□□□□ -0.87
SMAD3-215ENST00000560424 INTS8Q75QN2 995 aaKnown RBP9.63□□□□□ -0.87
SMAD3-215ENST00000560424 CNGA4Q8IV77 575 aa9.63□□□□□ -0.87
SMAD3-215ENST00000560424 MMAAQ8IVH4 418 aaKnown RBP9.63□□□□□ -0.87
SMAD3-215ENST00000560424 ARHGAP18Q8N392 663 aa9.63□□□□□ -0.87
SMAD3-215ENST00000560424 ZNF557Q8N988 423 aaPredicted RBP9.63□□□□□ -0.87
SMAD3-215ENST00000560424 XXYLT1Q8NBI6 393 aa9.63□□□□□ -0.87
SMAD3-215ENST00000560424 SPC24Q8NBT2 197 aa9.63□□□□□ -0.87
SMAD3-215ENST00000560424 SLC35C1Q96A29 364 aa9.63□□□□□ -0.87
SMAD3-215ENST00000560424 PLD4Q96BZ4 506 aa9.63□□□□□ -0.87
SMAD3-215ENST00000560424 TMA16Q96EY4 203 aaKnown RBP9.63□□□□□ -0.87
SMAD3-215ENST00000560424 PANX2Q96RD6 677 aa9.63□□□□□ -0.87
SMAD3-215ENST00000560424 CCNL2Q96S94 520 aaPredicted RBP9.63□□□□□ -0.87
SMAD3-215ENST00000560424 TTYH3Q9C0H2 523 aa9.63□□□□□ -0.87
SMAD3-215ENST00000560424 PNPLA8Q9NP80 782 aa9.63□□□□□ -0.87
SMAD3-215ENST00000560424 CLIC5Q9NZA1 410 aa9.63□□□□□ -0.87
SMAD3-215ENST00000560424 MARCH2Q9P0N8 246 aa9.63□□□□□ -0.87
SMAD3-215ENST00000560424 SERGEFQ9UGK8 458 aa9.63□□□□□ -0.87
SMAD3-215ENST00000560424 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.63□□□□□ -0.87
SMAD3-215ENST00000560424 A0A1B0GVM2 712 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 ENO4A6NNW6 628 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 TRIM38O00635 465 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 WNT9AO14904 365 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 SUV39H1O43463 412 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 NRDCO43847 1150 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 MFAP3LO75121 409 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 SIN3BO75182 1162 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 PPFIA2O75334 1257 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 GYPCP04921 128 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 GP1BAP07359 652 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 C7P10643 843 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 SLC8A1P32418 973 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 PSMD8P48556 350 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 NDST1P52848 882 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 TLE1Q04724 770 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 CYP24A1Q07973 514 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 CDCP2Q5VXM1 449 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 KANSL1Q7Z3B3 1105 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 ADIPOR2Q86V24 386 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 IQCHQ86VS3 1027 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 UNC93AQ86WB7 457 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 SPATS2Q86XZ4 545 aaKnown RBP9.62□□□□□ -0.87
SMAD3-215ENST00000560424 CCDC117Q8IWD4 279 aaPredicted RBP9.62□□□□□ -0.87
SMAD3-215ENST00000560424 FAM186BQ8IYM0 893 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 ZNF276Q8N554 614 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 C12orf29Q8N999 325 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 EXD3Q8N9H8 876 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 TC2NQ8N9U0 490 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 OR4C6Q8NH72 309 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 GRAMD1AQ96CP6 724 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 CYFIP2Q96F07 1278 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 EEF2KMTQ96G04 330 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 SLC46A1Q96NT5 459 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 NAA15Q9BXJ9 866 aaKnown RBP9.62□□□□□ -0.87
SMAD3-215ENST00000560424 XYLT2Q9H1B5 865 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 KCNF1Q9H3M0 494 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 MTG2Q9H4K7 406 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 KCND1Q9NSA2 647 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 STARD5Q9NSY2 213 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 SIK3Q9Y2K2 1263 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 CEP83Q9Y592 693 aa9.62□□□□□ -0.87
SMAD3-215ENST00000560424 TYW5A2RUC4 315 aaKnown RBP9.61□□□□□ -0.87
SMAD3-215ENST00000560424 NEMP2A6NFY4 417 aa9.61□□□□□ -0.87
SMAD3-215ENST00000560424 ESPNB1AK53 854 aa9.61□□□□□ -0.87
SMAD3-215ENST00000560424 AKR1B15C9JRZ8 316 aaPredicted RBP9.61□□□□□ -0.87
SMAD3-215ENST00000560424 CLIC2O15247 247 aa9.61□□□□□ -0.87
SMAD3-215ENST00000560424 STX10O60499 249 aa9.61□□□□□ -0.87
SMAD3-215ENST00000560424 EXOC3O60645 756 aa9.61□□□□□ -0.87
SMAD3-215ENST00000560424 ADH1BP00325 375 aa9.61□□□□□ -0.87
SMAD3-215ENST00000560424 TPM1P09493 284 aa9.61□□□□□ -0.87
SMAD3-215ENST00000560424 CKMT1AP12532 417 aa9.61□□□□□ -0.87
SMAD3-215ENST00000560424 GOT1P17174 413 aa9.61□□□□□ -0.87
SMAD3-215ENST00000560424 DGKAP23743 735 aa9.61□□□□□ -0.87
SMAD3-215ENST00000560424 MAT2AP31153 395 aaKnown RBP9.61□□□□□ -0.87
SMAD3-215ENST00000560424 GTF2H1P32780 548 aa9.61□□□□□ -0.87
SMAD3-215ENST00000560424 NUDT1P36639 197 aa9.61□□□□□ -0.87
SMAD3-215ENST00000560424 CASP4P49662 377 aa9.61□□□□□ -0.87
SMAD3-215ENST00000560424 KIF11P52732 1056 aa9.61□□□□□ -0.87
SMAD3-215ENST00000560424 ADPRHP54922 357 aa9.61□□□□□ -0.87
SMAD3-215ENST00000560424 CLDN10P78369 228 aa9.61□□□□□ -0.87
SMAD3-215ENST00000560424 CCZ1BP86790 482 aa9.61□□□□□ -0.87
SMAD3-215ENST00000560424 CCZ1P86791 482 aaPredicted RBP9.61□□□□□ -0.87
SMAD3-215ENST00000560424 SERINC3Q13530 473 aa9.61□□□□□ -0.87
SMAD3-215ENST00000560424 NCOA4Q13772 614 aa9.61□□□□□ -0.87
SMAD3-215ENST00000560424 ISXQ2M1V0 245 aa9.61□□□□□ -0.87
SMAD3-215ENST00000560424 ARL13BQ3SXY8 428 aa9.61□□□□□ -0.87
SMAD3-215ENST00000560424 RNF219Q5W0B1 726 aaPredicted RBP9.61□□□□□ -0.87
SMAD3-215ENST00000560424 CEP135Q66GS9 1140 aa9.61□□□□□ -0.87
SMAD3-215ENST00000560424 IGF2-ASQ6U949 168 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms