RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 H3BMM5 538 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 TLR5O60602 858 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 MMP3P08254 477 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 KDELR1P24390 212 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 NYAP1Q6ZVC0 841 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 OR56A4Q8NGH8 313 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 MYLPFQ96A32 169 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 MID1IP1Q9NPA3 183 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 GUCY1B2O75343 617 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 SEC22BO75396 215 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 GJB6O95452 261 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 RBL1P28749 1068 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 DUSP4Q13115 394 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 USP39Q53GS9 565 aaKnown RBP13.68□□□□□ -0.22
TRAF3-208ENST00000560371 RAET1GQ6H3X3 334 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 RNPEPQ9H4A4 650 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 ENTPD4Q9Y227 616 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 STARD13Q9Y3M8 1113 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 ANKRD26Q9UPS8 1709 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 SMIM35A0A1B0GVV1 85 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 ANKDD1BA6NHY2 528 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 UBDO15205 165 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 CCNB1P14635 433 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 ARF4P18085 180 aaPredicted RBP13.68□□□□□ -0.22
TRAF3-208ENST00000560371 SMAD3P84022 425 aaKnown RBP13.68□□□□□ -0.22
TRAF3-208ENST00000560371 CD99L2Q8TCZ2 262 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 CAPNS2Q96L46 248 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 TTPALQ9BTX7 342 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 ZNF112Q9UJU3 913 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 ATP9AO75110 1047 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 GJB1P08034 283 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 ITGB5P18084 799 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 PAGE2BQ5JRK9 111 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 ATG16L2Q8NAA4 619 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 TRPC4APQ8TEL6 797 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 NEURL4Q96JN8 1562 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 DNALI1O14645 258 aaPredicted RBP13.68□□□□□ -0.22
TRAF3-208ENST00000560371 ADH1CP00326 375 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 SLC1A6P48664 564 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 PIK3CGP48736 1102 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 PRKAA2P54646 552 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 C16orf72Q14CZ0 275 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 FAM46CQ5VWP2 391 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 TTC33Q6PID6 262 aaPredicted RBP13.68□□□□□ -0.22
TRAF3-208ENST00000560371 OTOP2Q7RTS6 562 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 PSTKQ8IV42 348 aaKnown RBP13.68□□□□□ -0.22
TRAF3-208ENST00000560371 SLAIN1Q8ND83 568 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 PIK3R5Q8WYR1 880 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 CAAP1Q9H8G2 361 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 ZBTB48P10074 688 aaPredicted RBP13.68□□□□□ -0.22
TRAF3-208ENST00000560371 NCF4Q15080 339 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 RASA2Q15283 850 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 C12orf29Q8N999 325 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 AASDHPPTQ9NRN7 309 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 PRKAG3Q9UGI9 489 aa13.68□□□□□ -0.22
TRAF3-208ENST00000560371 TARBP2Q15633 366 aaKnown RBP13.67□□□□□ -0.22
TRAF3-208ENST00000560371 TRIP4Q15650 581 aaPredicted RBP13.67□□□□□ -0.22
TRAF3-208ENST00000560371 KCNA10Q16322 511 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 PARP6Q2NL67 630 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 N4BP2L1Q5TBK1 243 aaPredicted RBP13.67□□□□□ -0.22
TRAF3-208ENST00000560371 BNC2Q6ZN30 1099 aaPredicted RBP13.67□□□□□ -0.22
TRAF3-208ENST00000560371 DET1Q7L5Y6 550 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 VN1R5Q7Z5H4 357 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 CLYBLQ8N0X4 340 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 IL31RAQ8NI17 732 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 HGH1Q9BTY7 390 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 BRD9Q9H8M2 597 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 TCF7L2Q9NQB0 619 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 NAALADL1Q9UQQ1 740 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 PABPC1P11940 636 aaKnown RBP13.67□□□□□ -0.22
TRAF3-208ENST00000560371 ATP6V1B2P21281 511 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 CCT8P50990 548 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 FAM183BPQ6ZVS7 135 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 ZNF655Q8N720 491 aaPredicted RBP13.67□□□□□ -0.22
TRAF3-208ENST00000560371 ANKRD49Q8WVL7 239 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 CCT7Q99832 543 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.67□□□□□ -0.22
TRAF3-208ENST00000560371 COL1A2P08123 1366 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 COL3A1P02461 1466 aaPredicted RBP13.67□□□□□ -0.22
TRAF3-208ENST00000560371 CLDN5O00501 218 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 PARNO95453 639 aaKnown RBP13.67□□□□□ -0.22
TRAF3-208ENST00000560371 CLTBP09497 229 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 DGKAP23743 735 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 GABRR2P28476 465 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 PFKPQ01813 784 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 DDR2Q16832 855 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 LRRC34Q8IZ02 419 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 LRRC52Q8N7C0 313 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 EPS8L1Q8TE68 723 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 SEMA4DQ92854 862 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 A0A087X0B3 334 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 DPP10Q8N608 796 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 OSBPL6Q9BZF3 934 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 SEMA4AQ9H3S1 761 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 ANKRD6Q9Y2G4 727 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 TNFSF9P41273 254 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 CRY1Q16526 586 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 CYP2A13Q16696 494 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 HSDL1Q3SXM5 330 aa13.67□□□□□ -0.22
TRAF3-208ENST00000560371 SCARA3Q6AZY7 606 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms