RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 PABPC3Q9H361 631 aaKnown RBP23.92■■□□□ 1.42
CRNDE-209ENST00000560208 SGK2Q9HBY8 427 aa23.92■■□□□ 1.42
CRNDE-209ENST00000560208 ADAM22Q9P0K1 906 aa23.92■■□□□ 1.42
CRNDE-209ENST00000560208 VANGL2Q9ULK5 521 aa23.92■■□□□ 1.42
CRNDE-209ENST00000560208 SCML1Q9UN30 329 aa23.92■■□□□ 1.42
CRNDE-209ENST00000560208 NCKAP1Q9Y2A7 1128 aa23.92■■□□□ 1.42
CRNDE-209ENST00000560208 HS3ST4Q9Y661 456 aa23.92■■□□□ 1.42
CRNDE-209ENST00000560208 EDDM13A0A1B0GTR0 161 aa23.91■■□□□ 1.42
CRNDE-209ENST00000560208 PAGE1O75459 146 aa23.91■■□□□ 1.42
CRNDE-209ENST00000560208 GJB3O75712 270 aa23.91■■□□□ 1.42
CRNDE-209ENST00000560208 CD59P13987 128 aa23.91■■□□□ 1.42
CRNDE-209ENST00000560208 MMP8P22894 467 aa23.91■■□□□ 1.42
CRNDE-209ENST00000560208 PRKCIP41743 596 aa23.91■■□□□ 1.42
CRNDE-209ENST00000560208 NUMBP49757 651 aa23.91■■□□□ 1.42
CRNDE-209ENST00000560208 PLK1P53350 603 aa23.91■■□□□ 1.42
CRNDE-209ENST00000560208 OXCT1P55809 520 aa23.91■■□□□ 1.42
CRNDE-209ENST00000560208 TRIM14Q14142 442 aa23.91■■□□□ 1.42
CRNDE-209ENST00000560208 OTUD1Q5VV17 481 aaPredicted RBP23.91■■□□□ 1.42
CRNDE-209ENST00000560208 CXorf57Q6NSI4 855 aaKnown RBP23.91■■□□□ 1.42
CRNDE-209ENST00000560208 TMC6Q7Z403 805 aa23.91■■□□□ 1.42
CRNDE-209ENST00000560208 GANCQ8TET4 914 aa23.91■■□□□ 1.42
CRNDE-209ENST00000560208 SYT11Q9BT88 431 aa23.91■■□□□ 1.42
CRNDE-209ENST00000560208 ADAM33Q9BZ11 813 aa23.91■■□□□ 1.42
CRNDE-209ENST00000560208 SIK2Q9H0K1 926 aa23.91■■□□□ 1.42
CRNDE-209ENST00000560208 PIGVQ9NUD9 493 aa23.91■■□□□ 1.42
CRNDE-209ENST00000560208 FBXL12Q9NXK8 326 aa23.91■■□□□ 1.42
CRNDE-209ENST00000560208 STAP1Q9ULZ2 295 aa23.91■■□□□ 1.42
CRNDE-209ENST00000560208 ZBTB32Q9Y2Y4 487 aaPredicted RBP23.91■■□□□ 1.42
CRNDE-209ENST00000560208 FRYQ5TBA9 3013 aa23.91■■□□□ 1.42
CRNDE-209ENST00000560208 TPM1P09493 284 aa23.9■■□□□ 1.42
CRNDE-209ENST00000560208 TFE3P19532 575 aaPredicted RBP23.9■■□□□ 1.42
CRNDE-209ENST00000560208 SCNN1AP37088 669 aa23.9■■□□□ 1.42
CRNDE-209ENST00000560208 GGCXP38435 758 aa23.9■■□□□ 1.42
CRNDE-209ENST00000560208 NNMTP40261 264 aa23.9■■□□□ 1.42
CRNDE-209ENST00000560208 STK19P49842 368 aaPredicted RBP23.9■■□□□ 1.42
CRNDE-209ENST00000560208 IRAK1P51617 712 aa23.9■■□□□ 1.42
CRNDE-209ENST00000560208 SULT2A1Q06520 285 aa23.9■■□□□ 1.42
CRNDE-209ENST00000560208 FOXC1Q12948 553 aa23.9■■□□□ 1.42
CRNDE-209ENST00000560208 CST6Q15828 149 aa23.9■■□□□ 1.42
CRNDE-209ENST00000560208 USP30Q70CQ3 517 aa23.9■■□□□ 1.42
CRNDE-209ENST00000560208 MMAAQ8IVH4 418 aaKnown RBP23.9■■□□□ 1.42
CRNDE-209ENST00000560208 NT5C3BQ969T7 300 aa23.9■■□□□ 1.42
CRNDE-209ENST00000560208 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.9■■□□□ 1.42
CRNDE-209ENST00000560208 WDCPQ9H6R7 721 aa23.9■■□□□ 1.42
CRNDE-209ENST00000560208 METTL5Q9NRN9 209 aaKnown RBP23.9■■□□□ 1.42
CRNDE-209ENST00000560208 TAS2R14Q9NYV8 317 aa23.9■■□□□ 1.42
CRNDE-209ENST00000560208 CABIN1Q9Y6J0 2220 aa23.9■■□□□ 1.42
CRNDE-209ENST00000560208 MID1O15344 667 aa23.89■■□□□ 1.41
CRNDE-209ENST00000560208 ADCY5O95622 1261 aa23.89■■□□□ 1.41
CRNDE-209ENST00000560208 CXCR3P49682 368 aa23.89■■□□□ 1.41
CRNDE-209ENST00000560208 SULT1E1P49888 294 aa23.89■■□□□ 1.41
CRNDE-209ENST00000560208 SFSWAPQ12872 951 aaKnown RBP23.89■■□□□ 1.41
CRNDE-209ENST00000560208 SLC14A1Q13336 389 aa23.89■■□□□ 1.41
CRNDE-209ENST00000560208 BRMS1LQ5PSV4 323 aa23.89■■□□□ 1.41
CRNDE-209ENST00000560208 ACAD10Q6JQN1 1059 aa23.89■■□□□ 1.41
CRNDE-209ENST00000560208 SND1Q7KZF4 910 aaKnown RBP eCLIP23.89■■□□□ 1.41
CRNDE-209ENST00000560208 C14orf80Q86SX3 495 aa23.89■■□□□ 1.41
CRNDE-209ENST00000560208 DNAAF5Q86Y56 855 aa23.89■■□□□ 1.41
CRNDE-209ENST00000560208 PHF13Q86YI8 300 aaPredicted RBP23.89■■□□□ 1.41
CRNDE-209ENST00000560208 SYN2Q92777 582 aaPredicted RBP23.89■■□□□ 1.41
CRNDE-209ENST00000560208 PTPRN2Q92932 1015 aa23.89■■□□□ 1.41
CRNDE-209ENST00000560208 BIRC7Q96CA5 298 aa23.89■■□□□ 1.41
CRNDE-209ENST00000560208 PPP1R9BQ96SB3 815 aa23.89■■□□□ 1.41
CRNDE-209ENST00000560208 FAM129BQ96TA1 746 aa23.89■■□□□ 1.41
CRNDE-209ENST00000560208 ARHGEF38Q9NXL2 777 aa23.89■■□□□ 1.41
CRNDE-209ENST00000560208 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.88■■□□□ 1.41
CRNDE-209ENST00000560208 SPAARA0A1B0GVQ0 90 aa23.88■■□□□ 1.41
CRNDE-209ENST00000560208 DDX3XO00571 662 aaKnown RBP eCLIP23.88■■□□□ 1.416e-9■■□□□ 14.5
CRNDE-209ENST00000560208 FSBPO95073 299 aa23.88■■□□□ 1.41
CRNDE-209ENST00000560208 GJB6O95452 261 aa23.88■■□□□ 1.41
CRNDE-209ENST00000560208 SERPING1P05155 500 aa23.88■■□□□ 1.41
CRNDE-209ENST00000560208 CALB1P05937 261 aa23.88■■□□□ 1.41
CRNDE-209ENST00000560208 PLEKP08567 350 aaPredicted RBP23.88■■□□□ 1.41
CRNDE-209ENST00000560208 SLC8A1P32418 973 aa23.88■■□□□ 1.41
CRNDE-209ENST00000560208 ZNF75DP51815 510 aa23.88■■□□□ 1.41
CRNDE-209ENST00000560208 BNC1Q01954 994 aa23.88■■□□□ 1.41
CRNDE-209ENST00000560208 PTP4A2Q12974 167 aa23.88■■□□□ 1.41
CRNDE-209ENST00000560208 ZNF177Q13360 481 aaPredicted RBP23.88■■□□□ 1.41
CRNDE-209ENST00000560208 C5orf22Q49AR2 442 aa23.88■■□□□ 1.41
CRNDE-209ENST00000560208 HGSNATQ68CP4 663 aa23.88■■□□□ 1.41
CRNDE-209ENST00000560208 STK40Q8N2I9 435 aa23.88■■□□□ 1.41
CRNDE-209ENST00000560208 ALG14Q96F25 216 aa23.88■■□□□ 1.41
CRNDE-209ENST00000560208 PGAP3Q96FM1 320 aaPredicted RBP23.88■■□□□ 1.41
CRNDE-209ENST00000560208 TBCBQ99426 244 aa23.88■■□□□ 1.41
CRNDE-209ENST00000560208 TKTL2Q9H0I9 626 aa23.88■■□□□ 1.41
CRNDE-209ENST00000560208 ANLNQ9NQW6 1124 aa23.88■■□□□ 1.41
CRNDE-209ENST00000560208 SERGEFQ9UGK8 458 aa23.88■■□□□ 1.41
CRNDE-209ENST00000560208 SLCO1B1Q9Y6L6 691 aa23.88■■□□□ 1.41
CRNDE-209ENST00000560208 KMT2BQ9UMN6 2715 aaPredicted RBP23.88■■□□□ 1.41
CRNDE-209ENST00000560208 A0A1W2PP55 124 aa23.87■■□□□ 1.41
CRNDE-209ENST00000560208 CLDN11O75508 207 aa23.87■■□□□ 1.41
CRNDE-209ENST00000560208 F9P00740 461 aa23.87■■□□□ 1.41
CRNDE-209ENST00000560208 CSNK1EP49674 416 aaKnown RBP23.87■■□□□ 1.41
CRNDE-209ENST00000560208 AFF3P51826 1226 aaKnown RBP23.87■■□□□ 1.41
CRNDE-209ENST00000560208 SIM1P81133 766 aaPredicted RBP23.87■■□□□ 1.41
CRNDE-209ENST00000560208 DEUP1Q05D60 604 aa23.87■■□□□ 1.41
CRNDE-209ENST00000560208 SLC25A52Q3SY17 297 aa23.87■■□□□ 1.41
CRNDE-209ENST00000560208 MON1BQ7L1V2 547 aa23.87■■□□□ 1.41
CRNDE-209ENST00000560208 OR52K2Q8NGK3 314 aa23.87■■□□□ 1.41
CRNDE-209ENST00000560208 OMDQ99983 421 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms