RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 VAV1P15498 845 aa13.5□□□□□ -0.25
TPM1-220ENST00000559556 PDGFRAP16234 1089 aa13.5□□□□□ -0.25
TPM1-220ENST00000559556 GNA15P30679 374 aa13.5□□□□□ -0.25
TPM1-220ENST00000559556 HNF1BP35680 557 aa13.5□□□□□ -0.25
TPM1-220ENST00000559556 NNMTP40261 264 aa13.5□□□□□ -0.25
TPM1-220ENST00000559556 RXRGP48443 463 aa13.5□□□□□ -0.25
TPM1-220ENST00000559556 ARRB1P49407 418 aaPredicted RBP13.5□□□□□ -0.25
TPM1-220ENST00000559556 ACADVLP49748 655 aa13.5□□□□□ -0.25
TPM1-220ENST00000559556 NXPH1P58417 271 aa13.5□□□□□ -0.25
TPM1-220ENST00000559556 PDCLQ13371 301 aa13.5□□□□□ -0.25
TPM1-220ENST00000559556 RABGAP1LQ5R372 815 aa13.5□□□□□ -0.25
TPM1-220ENST00000559556 PRAMEF14Q5SWL7 426 aa13.5□□□□□ -0.25
TPM1-220ENST00000559556 SFMBT2Q5VUG0 894 aa13.5□□□□□ -0.25
TPM1-220ENST00000559556 NAPEPLDQ6IQ20 393 aa13.5□□□□□ -0.25
TPM1-220ENST00000559556 CXorf57Q6NSI4 855 aaKnown RBP13.5□□□□□ -0.25
TPM1-220ENST00000559556 KANSL1Q7Z3B3 1105 aa13.5□□□□□ -0.25
TPM1-220ENST00000559556 CIR1Q86X95 450 aaPredicted RBP13.5□□□□□ -0.25
TPM1-220ENST00000559556 OXR1Q8N573 874 aa13.5□□□□□ -0.25
TPM1-220ENST00000559556 OR14C36Q8NHC7 312 aa13.5□□□□□ -0.25
TPM1-220ENST00000559556 ZNF606Q8WXB4 792 aa13.5□□□□□ -0.25
TPM1-220ENST00000559556 TSC1Q92574 1164 aa13.5□□□□□ -0.25
TPM1-220ENST00000559556 NXPE2Q96DL1 559 aa13.5□□□□□ -0.25
TPM1-220ENST00000559556 LRIG1Q96JA1 1093 aa13.5□□□□□ -0.25
TPM1-220ENST00000559556 CNDP2Q96KP4 475 aaKnown RBP13.5□□□□□ -0.25
TPM1-220ENST00000559556 MED15Q96RN5 788 aa13.5□□□□□ -0.25
TPM1-220ENST00000559556 KDM4CQ9H3R0 1056 aa13.5□□□□□ -0.25
TPM1-220ENST00000559556 ERVMER34-1Q9H9K5 563 aa13.5□□□□□ -0.25
TPM1-220ENST00000559556 TLR4O00206 839 aa13.49□□□□□ -0.25
TPM1-220ENST00000559556 PLK4O00444 970 aa13.49□□□□□ -0.25
TPM1-220ENST00000559556 SLC7A4O43246 635 aa13.49□□□□□ -0.25
TPM1-220ENST00000559556 THAP12O43422 761 aa13.49□□□□□ -0.25
TPM1-220ENST00000559556 PLRG1O43660 514 aaKnown RBP13.49□□□□□ -0.25
TPM1-220ENST00000559556 ITGAVP06756 1048 aa13.49□□□□□ -0.25
TPM1-220ENST00000559556 GLI1P08151 1106 aa13.49□□□□□ -0.25
TPM1-220ENST00000559556 SLC2A3P11169 496 aa13.49□□□□□ -0.25
TPM1-220ENST00000559556 NUDT1P36639 197 aa13.49□□□□□ -0.25
TPM1-220ENST00000559556 METAP1P53582 386 aa13.49□□□□□ -0.25
TPM1-220ENST00000559556 OXCT1P55809 520 aa13.49□□□□□ -0.25
TPM1-220ENST00000559556 NUCB2P80303 420 aa13.49□□□□□ -0.25
TPM1-220ENST00000559556 DNAJC3Q13217 504 aa13.49□□□□□ -0.25
TPM1-220ENST00000559556 MORC3Q14149 939 aa13.49□□□□□ -0.25
TPM1-220ENST00000559556 SLC45A4Q5BKX6 768 aa13.49□□□□□ -0.25
TPM1-220ENST00000559556 ENOSF1Q7L5Y1 443 aa13.49□□□□□ -0.25
TPM1-220ENST00000559556 DSG4Q86SJ6 1040 aa13.49□□□□□ -0.25
TPM1-220ENST00000559556 IQCHQ86VS3 1027 aa13.49□□□□□ -0.25
TPM1-220ENST00000559556 MFSD2AQ8NA29 543 aa13.49□□□□□ -0.25
TPM1-220ENST00000559556 ALG14Q96F25 216 aa13.49□□□□□ -0.25
TPM1-220ENST00000559556 BBC3Q96PG8 261 aaPredicted RBP13.49□□□□□ -0.25
TPM1-220ENST00000559556 SLC2A13Q96QE2 648 aa13.49□□□□□ -0.25
TPM1-220ENST00000559556 FAM204AQ9H8W3 233 aa13.49□□□□□ -0.25
TPM1-220ENST00000559556 UBE2TQ9NPD8 197 aaPredicted RBP13.49□□□□□ -0.25
TPM1-220ENST00000559556 ARHGAP20Q9P2F6 1191 aa13.49□□□□□ -0.25
TPM1-220ENST00000559556 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.49□□□□□ -0.25
TPM1-220ENST00000559556 TBC1D3DA0A087WVF3 549 aa13.48□□□□□ -0.25
TPM1-220ENST00000559556 TBC1D3IA0A087WXS9 549 aa13.48□□□□□ -0.25
TPM1-220ENST00000559556 TBC1D3EA0A087X179 549 aa13.48□□□□□ -0.25
TPM1-220ENST00000559556 TBC1D3KA0A087X1G2 549 aa13.48□□□□□ -0.25
TPM1-220ENST00000559556 TBC1D3FA6NER0 549 aaPredicted RBP13.48□□□□□ -0.25
TPM1-220ENST00000559556 TBC1D3LB9A6J9 549 aa13.48□□□□□ -0.25
TPM1-220ENST00000559556 ALOX15BO15296 676 aa13.48□□□□□ -0.25
TPM1-220ENST00000559556 ATP9BO43861 1147 aa13.48□□□□□ -0.25
TPM1-220ENST00000559556 TBC1D3HP0C7X1 549 aa13.48□□□□□ -0.25
TPM1-220ENST00000559556 CCR1P32246 355 aa13.48□□□□□ -0.25
TPM1-220ENST00000559556 CENPCQ03188 943 aa13.48□□□□□ -0.25
TPM1-220ENST00000559556 PAK1Q13153 545 aa13.48□□□□□ -0.25
TPM1-220ENST00000559556 TAF5Q15542 800 aa13.48□□□□□ -0.25
TPM1-220ENST00000559556 AGBL4Q5VU57 503 aa13.48□□□□□ -0.25
TPM1-220ENST00000559556 TBC1D3GQ6DHY5 549 aa13.48□□□□□ -0.25
TPM1-220ENST00000559556 TBC1D3CQ6IPX1 549 aa13.48□□□□□ -0.25
TPM1-220ENST00000559556 FBXL19Q6PCT2 694 aa13.48□□□□□ -0.25
TPM1-220ENST00000559556 TRIM69Q86WT6 500 aa13.48□□□□□ -0.25
TPM1-220ENST00000559556 SPATS2Q86XZ4 545 aaKnown RBP13.48□□□□□ -0.25
TPM1-220ENST00000559556 TBC1D3Q8IZP1 549 aaPredicted RBP13.48□□□□□ -0.25
TPM1-220ENST00000559556 EID2Q8N6I1 236 aa13.48□□□□□ -0.25
TPM1-220ENST00000559556 OR8D1Q8WZ84 308 aa13.48□□□□□ -0.25
TPM1-220ENST00000559556 ACP6Q9NPH0 428 aa13.48□□□□□ -0.25
TPM1-220ENST00000559556 ASNSD1Q9NWL6 643 aa13.48□□□□□ -0.25
TPM1-220ENST00000559556 DDIT4Q9NX09 232 aa13.48□□□□□ -0.25
TPM1-220ENST00000559556 SLC12A6Q9UHW9 1150 aa13.48□□□□□ -0.25
TPM1-220ENST00000559556 SLC25A13Q9UJS0 675 aa13.48□□□□□ -0.25
TPM1-220ENST00000559556 SARDHQ9UL12 918 aa13.48□□□□□ -0.25
TPM1-220ENST00000559556 DMTF1Q9Y222 760 aa13.48□□□□□ -0.25
TPM1-220ENST00000559556 TLN1Q9Y490 2541 aaKnown RBP13.48□□□□□ -0.25
TPM1-220ENST00000559556 BECN2A8MW95 431 aa13.47□□□□□ -0.25
TPM1-220ENST00000559556 MAGEC1O60732 1142 aa13.47□□□□□ -0.25
TPM1-220ENST00000559556 HSF2BPO75031 334 aa13.47□□□□□ -0.25
TPM1-220ENST00000559556 RTN2O75298 545 aa13.47□□□□□ -0.25
TPM1-220ENST00000559556 NUMBP49757 651 aa13.47□□□□□ -0.25
TPM1-220ENST00000559556 CDK17Q00537 523 aa13.47□□□□□ -0.25
TPM1-220ENST00000559556 OVGP1Q12889 678 aa13.47□□□□□ -0.25
TPM1-220ENST00000559556 BNIP3Q12983 259 aa13.47□□□□□ -0.25
TPM1-220ENST00000559556 MTA1Q13330 715 aa13.47□□□□□ -0.25
TPM1-220ENST00000559556 ILKQ13418 452 aa13.47□□□□□ -0.25
TPM1-220ENST00000559556 SETMARQ53H47 684 aaPredicted RBP13.47□□□□□ -0.25
TPM1-220ENST00000559556 C6orf118Q5T5N4 469 aa13.47□□□□□ -0.25
TPM1-220ENST00000559556 HES3Q5TGS1 186 aa13.47□□□□□ -0.25
TPM1-220ENST00000559556 FAM46CQ5VWP2 391 aa13.47□□□□□ -0.25
TPM1-220ENST00000559556 FBXL22Q6P050 247 aa13.47□□□□□ -0.25
TPM1-220ENST00000559556 TRIM65Q6PJ69 517 aa13.47□□□□□ -0.25
TPM1-220ENST00000559556 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms