RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 GNA12Q03113 381 aa20.8■□□□□ 0.92
TSPAN3-207ENST00000559494 SERPINA13PQ6UXR4 307 aa20.8■□□□□ 0.92
TSPAN3-207ENST00000559494 ZNF783Q6ZMS7 281 aa20.8■□□□□ 0.92
TSPAN3-207ENST00000559494 TSTD1Q8NFU3 115 aa20.8■□□□□ 0.92
TSPAN3-207ENST00000559494 NOL6Q9H6R4 1146 aaKnown RBP20.8■□□□□ 0.92
TSPAN3-207ENST00000559494 CATSPERBQ9H7T0 1116 aa20.8■□□□□ 0.92
TSPAN3-207ENST00000559494 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.8■□□□□ 0.92
TSPAN3-207ENST00000559494 A0A0U1RQJ8 604 aa20.79■□□□□ 0.92
TSPAN3-207ENST00000559494 BUB1BO60566 1050 aaPredicted RBP20.79■□□□□ 0.92
TSPAN3-207ENST00000559494 SNAP91O60641 907 aa20.79■□□□□ 0.92
TSPAN3-207ENST00000559494 APBB3O95704 486 aa20.79■□□□□ 0.92
TSPAN3-207ENST00000559494 SRPRAP08240 638 aaKnown RBP20.79■□□□□ 0.92
TSPAN3-207ENST00000559494 ACVRL1P37023 503 aa20.79■□□□□ 0.92
TSPAN3-207ENST00000559494 FNTBP49356 437 aa20.79■□□□□ 0.92
TSPAN3-207ENST00000559494 STK19P49842 368 aaPredicted RBP20.79■□□□□ 0.92
TSPAN3-207ENST00000559494 ARSEP51690 589 aa20.79■□□□□ 0.92
TSPAN3-207ENST00000559494 SULT2A1Q06520 285 aa20.79■□□□□ 0.92
TSPAN3-207ENST00000559494 HEATR6Q6AI08 1181 aaKnown RBP20.79■□□□□ 0.92
TSPAN3-207ENST00000559494 RFX8Q6ZV50 586 aa20.79■□□□□ 0.92
TSPAN3-207ENST00000559494 POLNQ7Z5Q5 900 aa20.79■□□□□ 0.92
TSPAN3-207ENST00000559494 ZNF366Q8N895 744 aa20.79■□□□□ 0.92
TSPAN3-207ENST00000559494 FAM71BQ8TC56 605 aa20.79■□□□□ 0.92
TSPAN3-207ENST00000559494 ATRIPQ8WXE1 791 aa20.79■□□□□ 0.92
TSPAN3-207ENST00000559494 SPON2Q9BUD6 331 aa20.79■□□□□ 0.92
TSPAN3-207ENST00000559494 FAM126AQ9BYI3 521 aaPredicted RBP20.79■□□□□ 0.92
TSPAN3-207ENST00000559494 PCDH18Q9HCL0 1135 aa20.79■□□□□ 0.92
TSPAN3-207ENST00000559494 POLMQ9NP87 494 aaPredicted RBP20.79■□□□□ 0.92
TSPAN3-207ENST00000559494 HYOU1Q9Y4L1 999 aa20.79■□□□□ 0.92
TSPAN3-207ENST00000559494 CKAP5Q14008 2032 aa20.79■□□□□ 0.92
TSPAN3-207ENST00000559494 BTNL10A8MVZ5 291 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 FGF10O15520 208 aaPredicted RBP20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 EPHX1P07099 455 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 ERCC2P18074 760 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 COMTP21964 271 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 GLDCP23378 1020 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 IL4RP24394 825 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 GJC1P36383 396 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 ZNF135P52742 658 aaPredicted RBP20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 ST8SIA6P61647 398 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 DPYSQ14117 519 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 KIAA1328Q86T90 577 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 KDM1BQ8NB78 822 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 CCDC112Q8NEF3 446 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 ARHGEF2Q92974 986 aaKnown RBP20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 ACE2Q9BYF1 805 aaPredicted RBP20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 MAGEH1Q9H213 219 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 GOLPH3Q9H4A6 298 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 MTG2Q9H4K7 406 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 ZSCAN32Q9NX65 697 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 EBF1Q9UH73 591 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 VPS51Q9UID3 782 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 ADGRG1Q9Y653 693 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 ALG6Q9Y672 507 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 MUC22E2RYF6 1773 aaPredicted RBP20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 TCRBV21S2A2A0A5A6 115 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 TTC34A8MYJ7 566 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 H3BRJ5 948 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 ARHGAP6O43182 974 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 DAPK3O43293 454 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 BUB1O43683 1085 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 ZMPSTE24O75844 475 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 MT-CO1P00395 513 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 CD48P09326 243 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 AMPD1P23109 780 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 SLC1A1P43005 524 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 VASPP50552 380 aaPredicted RBP20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 NRLP54845 237 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 CDH6P55285 790 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 CCZ1BP86790 482 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 CCZ1P86791 482 aaPredicted RBP20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 ANO7Q6IWH7 933 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 RASSF3Q86WH2 238 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 FANCMQ8IYD8 2048 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 UMODL1-AS1Q8N2C9 162 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 DCAF4L2Q8NA75 395 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 ZBTB44Q8NCP5 570 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 TPCN2Q8NHX9 752 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 TSC1Q92574 1164 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 ATOH1Q92858 354 aaPredicted RBP20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 CSPG4P5Q96PW8 444 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 C2orf49Q9BVC5 232 aaPredicted RBP20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 KLC2Q9H0B6 622 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 ATP13A1Q9HD20 1204 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 SUN2Q9UH99 717 aa20.78■□□□□ 0.92
TSPAN3-207ENST00000559494 VPS13AQ96RL7 3174 aa20.77■□□□□ 0.92
TSPAN3-207ENST00000559494 SDK1Q7Z5N4 2213 aa20.77■□□□□ 0.91
TSPAN3-207ENST00000559494 RAMP2O60895 175 aa20.77■□□□□ 0.91
TSPAN3-207ENST00000559494 KRT7P08729 469 aa20.77■□□□□ 0.91
TSPAN3-207ENST00000559494 GABRG2P18507 467 aa20.77■□□□□ 0.91
TSPAN3-207ENST00000559494 ARL4AP40617 200 aa20.77■□□□□ 0.91
TSPAN3-207ENST00000559494 MMRN1Q13201 1228 aa20.77■□□□□ 0.91
TSPAN3-207ENST00000559494 CAMK2GQ13555 558 aaPredicted RBP20.77■□□□□ 0.91
TSPAN3-207ENST00000559494 KRT81Q14533 505 aa20.77■□□□□ 0.91
TSPAN3-207ENST00000559494 STARD3Q14849 445 aa20.77■□□□□ 0.91
TSPAN3-207ENST00000559494 POLD3Q15054 466 aaPredicted RBP20.77■□□□□ 0.91
TSPAN3-207ENST00000559494 WDR5BQ86VZ2 330 aa20.77■□□□□ 0.91
TSPAN3-207ENST00000559494 MDGA1Q8NFP4 955 aa20.77■□□□□ 0.91
TSPAN3-207ENST00000559494 IRF2BPLQ9H1B7 796 aa20.77■□□□□ 0.91
TSPAN3-207ENST00000559494 PRSS16Q9NQE7 514 aa20.77■□□□□ 0.91
TSPAN3-207ENST00000559494 FAM86C1Q9NVL1 165 aa20.77■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms