RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 CDC25BP30305 580 aa19.19■□□□□ 0.66
CASC4-209ENST00000559222 SLC25A11Q02978 314 aaKnown RBP19.19■□□□□ 0.66
CASC4-209ENST00000559222 CAMK2GQ13555 558 aaPredicted RBP19.19■□□□□ 0.66
CASC4-209ENST00000559222 SLC12A1Q13621 1099 aa19.19■□□□□ 0.66
CASC4-209ENST00000559222 SIM2Q14190 667 aaPredicted RBP19.19■□□□□ 0.66
CASC4-209ENST00000559222 MAP7D1Q3KQU3 841 aa19.19■□□□□ 0.66
CASC4-209ENST00000559222 KIAA1324Q6UXG2 1013 aaKnown RBP19.19■□□□□ 0.66
CASC4-209ENST00000559222 LINGO4Q6UY18 593 aa19.19■□□□□ 0.66
CASC4-209ENST00000559222 SETD3Q86TU7 594 aaPredicted RBP19.19■□□□□ 0.66
CASC4-209ENST00000559222 NIPA2Q8N8Q9 360 aa19.19■□□□□ 0.66
CASC4-209ENST00000559222 NETO2Q8NC67 525 aa19.19■□□□□ 0.66
CASC4-209ENST00000559222 PANX2Q96RD6 677 aa19.19■□□□□ 0.66
CASC4-209ENST00000559222 ZWILCHQ9H900 591 aa19.19■□□□□ 0.66
CASC4-209ENST00000559222 TMEM110-MUSTN1A8MSY1 372 aa19.18■□□□□ 0.66
CASC4-209ENST00000559222 K7ERQ8 282 aa19.18■□□□□ 0.66
CASC4-209ENST00000559222 PRPSAP2O60256 369 aa19.18■□□□□ 0.66
CASC4-209ENST00000559222 SIN3BO75182 1162 aa19.18■□□□□ 0.66
CASC4-209ENST00000559222 EPHB2P29323 1055 aa19.18■□□□□ 0.66
CASC4-209ENST00000559222 P2RY2P41231 377 aa19.18■□□□□ 0.66
CASC4-209ENST00000559222 MRE11P49959 708 aa19.18■□□□□ 0.66
CASC4-209ENST00000559222 GNA12Q03113 381 aa19.18■□□□□ 0.66
CASC4-209ENST00000559222 STARD3Q14849 445 aa19.18■□□□□ 0.66
CASC4-209ENST00000559222 ERMARDQ5T6L9 678 aa19.18■□□□□ 0.66
CASC4-209ENST00000559222 ACBD5Q5T8D3 534 aaPredicted RBP19.18■□□□□ 0.66
CASC4-209ENST00000559222 RAD9BQ6WBX8 426 aa19.18■□□□□ 0.66
CASC4-209ENST00000559222 TMEM139Q8IV31 216 aa19.18■□□□□ 0.66
CASC4-209ENST00000559222 KLC2Q9H0B6 622 aa19.18■□□□□ 0.66
CASC4-209ENST00000559222 IP6K2Q9UHH9 426 aa19.18■□□□□ 0.66
CASC4-209ENST00000559222 MFHAS1Q9Y4C4 1052 aa19.18■□□□□ 0.66
CASC4-209ENST00000559222 NUP205Q92621 2012 aa19.17■□□□□ 0.66
CASC4-209ENST00000559222 ILVBLA1L0T0 632 aa19.17■□□□□ 0.66
CASC4-209ENST00000559222 SYNCRIPO60506 623 aaKnown RBP19.17■□□□□ 0.66
CASC4-209ENST00000559222 ZMPSTE24O75844 475 aa19.17■□□□□ 0.66
CASC4-209ENST00000559222 LMNAP02545 664 aaKnown RBP19.17■□□□□ 0.66
CASC4-209ENST00000559222 SRPRAP08240 638 aaKnown RBP19.17■□□□□ 0.66
CASC4-209ENST00000559222 GOT1P17174 413 aa19.17■□□□□ 0.66
CASC4-209ENST00000559222 PCK1P35558 622 aa19.17■□□□□ 0.66
CASC4-209ENST00000559222 GJC1P36383 396 aa19.17■□□□□ 0.66
CASC4-209ENST00000559222 AIF1P55008 147 aa19.17■□□□□ 0.66
CASC4-209ENST00000559222 TAS2R40P59535 323 aa19.17■□□□□ 0.66
CASC4-209ENST00000559222 TPI1P60174 286 aa19.17■□□□□ 0.66
CASC4-209ENST00000559222 PIGHQ14442 188 aaPredicted RBP19.17■□□□□ 0.66
CASC4-209ENST00000559222 HNRNPA1L2Q32P51 320 aaKnown RBP19.17■□□□□ 0.66
CASC4-209ENST00000559222 ATP13A4Q4VNC1 1196 aa19.17■□□□□ 0.66
CASC4-209ENST00000559222 C6orf118Q5T5N4 469 aa19.17■□□□□ 0.66
CASC4-209ENST00000559222 C9orf64Q5T6V5 341 aa19.17■□□□□ 0.66
CASC4-209ENST00000559222 CEP68Q76N32 757 aa19.17■□□□□ 0.66
CASC4-209ENST00000559222 RTL3Q8N8U3 475 aaKnown RBP19.17■□□□□ 0.66
CASC4-209ENST00000559222 DCAF4L2Q8NA75 395 aa19.17■□□□□ 0.66
CASC4-209ENST00000559222 SLC35G2Q8TBE7 412 aa19.17■□□□□ 0.66
CASC4-209ENST00000559222 FRS2Q8WU20 508 aa19.17■□□□□ 0.66
CASC4-209ENST00000559222 HSPH1Q92598 858 aa19.17■□□□□ 0.66
CASC4-209ENST00000559222 EPAS1Q99814 870 aa19.17■□□□□ 0.66
CASC4-209ENST00000559222 SPON2Q9BUD6 331 aa19.17■□□□□ 0.66
CASC4-209ENST00000559222 UVRAGQ9P2Y5 699 aa19.17■□□□□ 0.66
CASC4-209ENST00000559222 CYP8B1Q9UNU6 501 aa19.17■□□□□ 0.66
CASC4-209ENST00000559222 REXO2Q9Y3B8 237 aaKnown RBP19.17■□□□□ 0.66
CASC4-209ENST00000559222 GPR179Q6PRD1 2367 aa19.17■□□□□ 0.66
CASC4-209ENST00000559222 MYO1FO00160 1098 aa19.16■□□□□ 0.66
CASC4-209ENST00000559222 SMAD6O43541 496 aaKnown RBP19.16■□□□□ 0.66
CASC4-209ENST00000559222 GFRA3O60609 400 aa19.16■□□□□ 0.66
CASC4-209ENST00000559222 PROSCO94903 275 aa19.16■□□□□ 0.66
CASC4-209ENST00000559222 LCA5LO95447 670 aa19.16■□□□□ 0.66
CASC4-209ENST00000559222 RARAP10276 462 aa19.16■□□□□ 0.66
CASC4-209ENST00000559222 SRCP12931 536 aa19.16■□□□□ 0.66
CASC4-209ENST00000559222 DESP17661 470 aa19.16■□□□□ 0.66
CASC4-209ENST00000559222 OXCT1P55809 520 aa19.16■□□□□ 0.66
CASC4-209ENST00000559222 ST8SIA6P61647 398 aa19.16■□□□□ 0.66
CASC4-209ENST00000559222 ARF5P84085 180 aa19.16■□□□□ 0.66
CASC4-209ENST00000559222 PPP6R3Q5H9R7 873 aaPredicted RBP19.16■□□□□ 0.66
CASC4-209ENST00000559222 LEKR1Q6ZMV7 388 aa19.16■□□□□ 0.66
CASC4-209ENST00000559222 TMPRSS6Q8IU80 811 aa19.16■□□□□ 0.66
CASC4-209ENST00000559222 DCLK2Q8N568 766 aa19.16■□□□□ 0.66
CASC4-209ENST00000559222 OR2T3Q8NH03 318 aa19.16■□□□□ 0.66
CASC4-209ENST00000559222 PTPRN2Q92932 1015 aa19.16■□□□□ 0.66
CASC4-209ENST00000559222 ARHGEF2Q92974 986 aaKnown RBP19.16■□□□□ 0.66
CASC4-209ENST00000559222 ANP32EQ9BTT0 268 aa19.16■□□□□ 0.66
CASC4-209ENST00000559222 DUSP15Q9H1R2 295 aaPredicted RBP19.16■□□□□ 0.66
CASC4-209ENST00000559222 PRDM16Q9HAZ2 1276 aa19.16■□□□□ 0.66
CASC4-209ENST00000559222 ATP13A1Q9HD20 1204 aa19.16■□□□□ 0.66
CASC4-209ENST00000559222 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.16■□□□□ 0.66
CASC4-209ENST00000559222 KLHL11Q9NVR0 708 aa19.16■□□□□ 0.66
CASC4-209ENST00000559222 CWC15Q9P013 229 aaKnown RBP19.16■□□□□ 0.66
CASC4-209ENST00000559222 NUMA1Q14980 2115 aa19.15■□□□□ 0.66
CASC4-209ENST00000559222 IGHV1OR15-9A0A0B4J2B8 117 aa19.15■□□□□ 0.66
CASC4-209ENST00000559222 RCCD1A6NED2 376 aa19.15■□□□□ 0.66
CASC4-209ENST00000559222 CBX4O00257 560 aa19.15■□□□□ 0.66
CASC4-209ENST00000559222 EEF2KO00418 725 aaKnown RBP19.15■□□□□ 0.66
CASC4-209ENST00000559222 CD160O95971 181 aa19.15■□□□□ 0.66
CASC4-209ENST00000559222 CNR2P34972 360 aa19.15■□□□□ 0.66
CASC4-209ENST00000559222 MAPKAPK2P49137 400 aa19.15■□□□□ 0.66
CASC4-209ENST00000559222 METAP1P53582 386 aa19.15■□□□□ 0.66
CASC4-209ENST00000559222 RPS14P62263 151 aaKnown RBP19.15■□□□□ 0.66
CASC4-209ENST00000559222 MESDQ14696 234 aa19.15■□□□□ 0.66
CASC4-209ENST00000559222 ACAP1Q15027 740 aa19.15■□□□□ 0.66
CASC4-209ENST00000559222 PLK5Q496M5 336 aa19.15■□□□□ 0.66
CASC4-209ENST00000559222 RFX8Q6ZV50 586 aa19.15■□□□□ 0.66
CASC4-209ENST00000559222 Q6ZVU0 165 aa19.15■□□□□ 0.66
CASC4-209ENST00000559222 TP53INP2Q8IXH6 220 aa19.15■□□□□ 0.66
CASC4-209ENST00000559222 STK40Q8N2I9 435 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms