RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 AGPAT3Q9NRZ7 376 aa12.29□□□□□ -0.44
SMAD3-206ENST00000558739 PISDQ9UG56 409 aa12.29□□□□□ -0.44
SMAD3-206ENST00000558739 NIPBLQ6KC79 2804 aaeCLIP12.29□□□□□ -0.44
SMAD3-206ENST00000558739 ITIH6Q6UXX5 1313 aa12.29□□□□□ -0.44
SMAD3-206ENST00000558739 EME2A4GXA9 379 aaPredicted RBP12.28□□□□□ -0.44
SMAD3-206ENST00000558739 KIAA0391O15091 583 aaKnown RBP12.28□□□□□ -0.44
SMAD3-206ENST00000558739 TGFB1I1O43294 461 aa12.28□□□□□ -0.44
SMAD3-206ENST00000558739 PHACTR2O75167 634 aa12.28□□□□□ -0.44
SMAD3-206ENST00000558739 RPS24P62847 133 aaKnown RBP12.28□□□□□ -0.44
SMAD3-206ENST00000558739 ALCAMQ13740 583 aa12.28□□□□□ -0.44
SMAD3-206ENST00000558739 MORC3Q14149 939 aa12.28□□□□□ -0.44
SMAD3-206ENST00000558739 PITRM1Q5JRX3 1037 aa12.28□□□□□ -0.44
SMAD3-206ENST00000558739 PPP1R26Q5T8A7 1209 aaPredicted RBP12.28□□□□□ -0.44
SMAD3-206ENST00000558739 PIK3R6Q5UE93 754 aa12.28□□□□□ -0.44
SMAD3-206ENST00000558739 SLC35F3Q8IY50 421 aa12.28□□□□□ -0.44
SMAD3-206ENST00000558739 FBXO39Q8N4B4 442 aa12.28□□□□□ -0.44
SMAD3-206ENST00000558739 EDEM1Q92611 657 aa12.28□□□□□ -0.44
SMAD3-206ENST00000558739 PANK4Q9NVE7 773 aa12.28□□□□□ -0.44
SMAD3-206ENST00000558739 RABGEF1Q9UJ41 708 aa12.28□□□□□ -0.44
SMAD3-206ENST00000558739 TPX2Q9ULW0 747 aaKnown RBP12.28□□□□□ -0.44
SMAD3-206ENST00000558739 LIMCH1Q9UPQ0 1083 aa12.28□□□□□ -0.44
SMAD3-206ENST00000558739 DCHS2Q6V1P9 2916 aa12.27□□□□□ -0.45
SMAD3-206ENST00000558739 A0A1W2PQU0 124 aa12.27□□□□□ -0.45
SMAD3-206ENST00000558739 TARSL2A2RTX5 802 aaKnown RBP12.27□□□□□ -0.45
SMAD3-206ENST00000558739 LRRIQ3A6PVS8 624 aaPredicted RBP12.27□□□□□ -0.45
SMAD3-206ENST00000558739 AGFG2O95081 481 aa12.27□□□□□ -0.45
SMAD3-206ENST00000558739 NEFLP07196 543 aa12.27□□□□□ -0.45
SMAD3-206ENST00000558739 LONP1P36776 959 aaKnown RBP12.27□□□□□ -0.45
SMAD3-206ENST00000558739 ETV5P41161 510 aa12.27□□□□□ -0.45
SMAD3-206ENST00000558739 SPIDRQ14159 915 aa12.27□□□□□ -0.45
SMAD3-206ENST00000558739 FZD2Q14332 565 aa12.27□□□□□ -0.45
SMAD3-206ENST00000558739 ELAVL3Q14576 367 aaKnown RBP12.27□□□□□ -0.45
SMAD3-206ENST00000558739 ZNF284Q2VY69 593 aa12.27□□□□□ -0.45
SMAD3-206ENST00000558739 NADSYN1Q6IA69 706 aa12.27□□□□□ -0.45
SMAD3-206ENST00000558739 BORAQ6PGQ7 559 aa12.27□□□□□ -0.45
SMAD3-206ENST00000558739 RAB11FIP2Q7L804 512 aa12.27□□□□□ -0.45
SMAD3-206ENST00000558739 PTAR1Q7Z6K3 402 aaPredicted RBP12.27□□□□□ -0.45
SMAD3-206ENST00000558739 APCDD1Q8J025 514 aa12.27□□□□□ -0.45
SMAD3-206ENST00000558739 CCDC3Q9BQI4 270 aa12.27□□□□□ -0.45
SMAD3-206ENST00000558739 DUSP23Q9BVJ7 150 aa12.27□□□□□ -0.45
SMAD3-206ENST00000558739 ADNPQ9H2P0 1102 aa12.27□□□□□ -0.45
SMAD3-206ENST00000558739 TCEAL2Q9H3H9 227 aaPredicted RBP12.27□□□□□ -0.45
SMAD3-206ENST00000558739 ANAPC2Q9UJX6 822 aa12.27□□□□□ -0.45
SMAD3-206ENST00000558739 SHANK1Q9Y566 2161 aa12.26□□□□□ -0.45
SMAD3-206ENST00000558739 A0A087X0B3 334 aa12.26□□□□□ -0.45
SMAD3-206ENST00000558739 NEMP2A6NFY4 417 aa12.26□□□□□ -0.45
SMAD3-206ENST00000558739 RNF103O00237 685 aa12.26□□□□□ -0.45
SMAD3-206ENST00000558739 TULP2O00295 520 aa12.26□□□□□ -0.45
SMAD3-206ENST00000558739 RNGTTO60942 597 aaKnown RBP12.26□□□□□ -0.45
SMAD3-206ENST00000558739 ASLP04424 464 aa12.26□□□□□ -0.45
SMAD3-206ENST00000558739 NME1P15531 152 aaKnown RBP12.26□□□□□ -0.45
SMAD3-206ENST00000558739 TNFRSF8P28908 595 aa12.26□□□□□ -0.45
SMAD3-206ENST00000558739 MLLT10P55197 1068 aa12.26□□□□□ -0.45
SMAD3-206ENST00000558739 NR0B2Q15466 257 aa12.26□□□□□ -0.45
SMAD3-206ENST00000558739 PIP5KL1Q5T9C9 394 aa12.26□□□□□ -0.45
SMAD3-206ENST00000558739 Q6ZSR6 202 aa12.26□□□□□ -0.45
SMAD3-206ENST00000558739 ABI3BPQ7Z7G0 1075 aa12.26□□□□□ -0.45
SMAD3-206ENST00000558739 UNC93AQ86WB7 457 aa12.26□□□□□ -0.45
SMAD3-206ENST00000558739 RBFAQ8N0V3 343 aa12.26□□□□□ -0.45
SMAD3-206ENST00000558739 CFAP52Q8N1V2 620 aa12.26□□□□□ -0.45
SMAD3-206ENST00000558739 CARNMT1Q8N4J0 409 aa12.26□□□□□ -0.45
SMAD3-206ENST00000558739 FIBINQ8TAL6 211 aa12.26□□□□□ -0.45
SMAD3-206ENST00000558739 PHF12Q96QT6 1004 aa12.26□□□□□ -0.45
SMAD3-206ENST00000558739 SLC12A9Q9BXP2 914 aa12.26□□□□□ -0.45
SMAD3-206ENST00000558739 DUSP16Q9BY84 665 aa12.26□□□□□ -0.45
SMAD3-206ENST00000558739 KIAA1586Q9HCI6 787 aa12.26□□□□□ -0.45
SMAD3-206ENST00000558739 PREBQ9HCU5 417 aa12.26□□□□□ -0.45
SMAD3-206ENST00000558739 TMPRSS4Q9NRS4 437 aa12.26□□□□□ -0.45
SMAD3-206ENST00000558739 STK17AQ9UEE5 414 aa12.26□□□□□ -0.45
SMAD3-206ENST00000558739 CEP83Q9Y592 693 aa12.26□□□□□ -0.45
SMAD3-206ENST00000558739 POM121BA6NF01 834 aa12.25□□□□□ -0.45
SMAD3-206ENST00000558739 D6RAR5 112 aa12.25□□□□□ -0.45
SMAD3-206ENST00000558739 NTN3O00634 580 aaPredicted RBP12.25□□□□□ -0.45
SMAD3-206ENST00000558739 SPINT1O43278 529 aa12.25□□□□□ -0.45
SMAD3-206ENST00000558739 SEMA7AO75326 666 aa12.25□□□□□ -0.45
SMAD3-206ENST00000558739 GCATO75600 419 aa12.25□□□□□ -0.45
SMAD3-206ENST00000558739 KRT7P08729 469 aa12.25□□□□□ -0.45
SMAD3-206ENST00000558739 CD58P19256 250 aa12.25□□□□□ -0.45
SMAD3-206ENST00000558739 NUDT1P36639 197 aa12.25□□□□□ -0.45
SMAD3-206ENST00000558739 DCTP40126 519 aa12.25□□□□□ -0.45
SMAD3-206ENST00000558739 CD97P48960 835 aa12.25□□□□□ -0.45
SMAD3-206ENST00000558739 ZNF445P59923 1031 aa12.25□□□□□ -0.45
SMAD3-206ENST00000558739 HNRNPKP61978 463 aaKnown RBP eCLIP12.25□□□□□ -0.45
SMAD3-206ENST00000558739 DLG4P78352 724 aa12.25□□□□□ -0.45
SMAD3-206ENST00000558739 ECT2LQ008S8 904 aa12.25□□□□□ -0.45
SMAD3-206ENST00000558739 CDH18Q13634 790 aa12.25□□□□□ -0.45
SMAD3-206ENST00000558739 RAB41Q5JT25 222 aa12.25□□□□□ -0.45
SMAD3-206ENST00000558739 SEL1L3Q68CR1 1132 aa12.25□□□□□ -0.45
SMAD3-206ENST00000558739 SV2BQ7L1I2 683 aa12.25□□□□□ -0.45
SMAD3-206ENST00000558739 DSG4Q86SJ6 1040 aa12.25□□□□□ -0.45
SMAD3-206ENST00000558739 PIGZQ86VD9 579 aa12.25□□□□□ -0.45
SMAD3-206ENST00000558739 DTX1Q86Y01 620 aa12.25□□□□□ -0.45
SMAD3-206ENST00000558739 NELFCDQ8IXH7 590 aa12.25□□□□□ -0.45
SMAD3-206ENST00000558739 KDM1BQ8NB78 822 aa12.25□□□□□ -0.45
SMAD3-206ENST00000558739 ZSCAN1Q8NBB4 408 aa12.25□□□□□ -0.45
SMAD3-206ENST00000558739 LMX1AQ8TE12 382 aa12.25□□□□□ -0.45
SMAD3-206ENST00000558739 FRS2Q8WU20 508 aa12.25□□□□□ -0.45
SMAD3-206ENST00000558739 BOCQ9BWV1 1114 aa12.25□□□□□ -0.45
SMAD3-206ENST00000558739 ULBP1Q9BZM6 244 aa12.25□□□□□ -0.45
SMAD3-206ENST00000558739 KDM4CQ9H3R0 1056 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms