RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 AKIRIN2Q53H80 203 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 CCDC24Q8N4L8 307 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 SMYD1Q8NB12 490 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 RBM15BQ8NDT2 890 aaKnown RBP11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 OR56A4Q8NGH8 313 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 NXNL1Q96CM4 212 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 ITPKCQ96DU7 683 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 SIPA1Q96FS4 1042 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 HOPXQ9BPY8 73 aaPredicted RBP11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 AP5M1Q9H0R1 490 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 IRF2BPLQ9H1B7 796 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 MED28Q9H204 178 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 MAGEE1Q9HCI5 957 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 ANKEF1Q9NU02 776 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 USP18Q9UMW8 372 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 SYNCRIPO60506 623 aaKnown RBP11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 H6PDO95479 791 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 CLTBP09497 229 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 PCNAP12004 261 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 LTKP29376 864 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 UBAP2LQ14157 1087 aaKnown RBP11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 SPESP1Q6UW49 350 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 CCDC185Q8N715 623 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 MOSPD2Q8NHP6 518 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 ACSF2Q96CM8 615 aaPredicted RBP11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 KLHL28Q9NXS3 571 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 CDH22Q9UJ99 828 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 INVSQ9Y283 1065 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 CLUHO75153 1309 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 ARHGEF33A8MVX0 844 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 H3BN98 237 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 KCNH1O95259 989 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 IFNA7P01567 189 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 CYP19A1P11511 503 aaPredicted RBP11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 GABRB2P47870 512 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 SEPHS1P49903 392 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 DOK7Q18PE1 504 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 PPM1LQ5SGD2 360 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 KIAA1841Q6NSI8 718 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 TLCD1Q96CP7 247 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 SSU72Q9NP77 194 aaKnown RBP11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 FBXO6Q9NRD1 293 aaPredicted RBP11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 MKLN1Q9UL63 735 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 SIK3Q9Y2K2 1263 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 FARP1Q9Y4F1 1045 aaPredicted RBP11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 ROBO2Q9HCK4 1378 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 RBM47A0AV96 593 aaKnown RBP11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 MGAT4DA6NG13 374 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 CCRL2O00421 344 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 SLC2A4P14672 509 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 PPP2R1BP30154 601 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 NR2C2P49116 596 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 TUFMP49411 452 aaKnown RBP11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 ZNF543Q08ER8 600 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 ZNF829Q3KNS6 432 aaPredicted RBP11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 CCNYL2Q5T2Q4 361 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 ANO7Q6IWH7 933 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 SPAG16Q8N0X2 631 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 MYO1HQ8N1T3 1032 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 C7orf26Q96N11 449 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 DUSP9Q99956 384 aaKnown RBP11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 VPS4AQ9UN37 437 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 NCANO14594 1321 aa11.95□□□□□ -0.5
CSPG4P12-201ENST00000558282 C2orf81A6NN90 581 aa11.94□□□□□ -0.5
CSPG4P12-201ENST00000558282 PRR5-ARHGAP8B1AHC4 643 aa11.94□□□□□ -0.5
CSPG4P12-201ENST00000558282 ORC5O43913 435 aa11.94□□□□□ -0.5
CSPG4P12-201ENST00000558282 ARHGAP8P85298 464 aa11.94□□□□□ -0.5
CSPG4P12-201ENST00000558282 CDH17Q12864 832 aa11.94□□□□□ -0.5
CSPG4P12-201ENST00000558282 CDC16Q13042 620 aa11.94□□□□□ -0.5
CSPG4P12-201ENST00000558282 EFR3AQ14156 821 aa11.94□□□□□ -0.5
CSPG4P12-201ENST00000558282 CA9Q16790 459 aa11.94□□□□□ -0.5
CSPG4P12-201ENST00000558282 LCN1P1Q5VSP4 162 aa11.94□□□□□ -0.5
CSPG4P12-201ENST00000558282 ARHGAP36Q6ZRI8 547 aa11.94□□□□□ -0.5
CSPG4P12-201ENST00000558282 TMIEQ8NEW7 156 aa11.94□□□□□ -0.5
CSPG4P12-201ENST00000558282 RCN3Q96D15 328 aa11.94□□□□□ -0.5
CSPG4P12-201ENST00000558282 GSDMCQ9BYG8 508 aa11.94□□□□□ -0.5
CSPG4P12-201ENST00000558282 MID1IP1Q9NPA3 183 aa11.94□□□□□ -0.5
CSPG4P12-201ENST00000558282 TMEM138Q9NPI0 162 aa11.94□□□□□ -0.5
CSPG4P12-201ENST00000558282 PRKAG3Q9UGI9 489 aa11.94□□□□□ -0.5
CSPG4P12-201ENST00000558282 LNPEPQ9UIQ6 1025 aa11.94□□□□□ -0.5
CSPG4P12-201ENST00000558282 PLCL2Q9UPR0 1127 aa11.94□□□□□ -0.5
CSPG4P12-201ENST00000558282 KIDINS220Q9ULH0 1771 aa11.94□□□□□ -0.5
CSPG4P12-201ENST00000558282 LGR5O75473 907 aa11.94□□□□□ -0.5
CSPG4P12-201ENST00000558282 APOL3O95236 402 aa11.94□□□□□ -0.5
CSPG4P12-201ENST00000558282 CPSF4O95639 269 aaKnown RBP11.94□□□□□ -0.5
CSPG4P12-201ENST00000558282 NR3C2P08235 984 aa11.94□□□□□ -0.5
CSPG4P12-201ENST00000558282 IDH2P48735 452 aaKnown RBP11.94□□□□□ -0.5
CSPG4P12-201ENST00000558282 HIRAP54198 1017 aaPredicted RBP11.94□□□□□ -0.5
CSPG4P12-201ENST00000558282 TMEM132DQ14C87 1099 aa11.94□□□□□ -0.5
CSPG4P12-201ENST00000558282 ATG9AQ7Z3C6 839 aa11.94□□□□□ -0.5
CSPG4P12-201ENST00000558282 PIWIL4Q7Z3Z4 852 aaKnown RBP11.94□□□□□ -0.5
CSPG4P12-201ENST00000558282 P2RY8Q86VZ1 359 aa11.94□□□□□ -0.5
CSPG4P12-201ENST00000558282 KCNMB4Q86W47 210 aa11.94□□□□□ -0.5
CSPG4P12-201ENST00000558282 CHSY1Q86X52 802 aa11.94□□□□□ -0.5
CSPG4P12-201ENST00000558282 CDK20Q8IZL9 346 aa11.94□□□□□ -0.5
CSPG4P12-201ENST00000558282 SLC20A1Q8WUM9 679 aa11.94□□□□□ -0.5
CSPG4P12-201ENST00000558282 BAP1Q92560 729 aa11.94□□□□□ -0.5
CSPG4P12-201ENST00000558282 HGH1Q9BTY7 390 aa11.94□□□□□ -0.5
CSPG4P12-201ENST00000558282 YTHDF1Q9BYJ9 559 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms