RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 PTK6Q13882 451 aa17.27■□□□□ 0.36
SNX1-203ENST00000558040 ANO4Q32M45 955 aa17.27■□□□□ 0.36
SNX1-203ENST00000558040 EML3Q32P44 896 aa17.27■□□□□ 0.36
SNX1-203ENST00000558040 LY6G5CQ5SRR4 150 aa17.27■□□□□ 0.36
SNX1-203ENST00000558040 FYB2Q5VWT5 728 aa17.27■□□□□ 0.36
SNX1-203ENST00000558040 RNF43Q68DV7 783 aa17.27■□□□□ 0.36
SNX1-203ENST00000558040 VITQ6UXI7 678 aa17.27■□□□□ 0.36
SNX1-203ENST00000558040 TMEM25Q86YD3 366 aa17.27■□□□□ 0.36
SNX1-203ENST00000558040 TP53INP2Q8IXH6 220 aa17.27■□□□□ 0.36
SNX1-203ENST00000558040 ADGRG2Q8IZP9 1017 aa17.27■□□□□ 0.36
SNX1-203ENST00000558040 GPR161Q8N6U8 529 aaKnown RBP17.27■□□□□ 0.36
SNX1-203ENST00000558040 FAM71DQ8N9W8 422 aa17.27■□□□□ 0.36
SNX1-203ENST00000558040 NETO2Q8NC67 525 aa17.27■□□□□ 0.36
SNX1-203ENST00000558040 BHMTQ93088 406 aa17.27■□□□□ 0.36
SNX1-203ENST00000558040 RTP4Q96DX8 246 aa17.27■□□□□ 0.36
SNX1-203ENST00000558040 HMCESQ96FZ2 354 aa17.27■□□□□ 0.36
SNX1-203ENST00000558040 SP110Q9HB58 689 aa17.27■□□□□ 0.36
SNX1-203ENST00000558040 PCDH9Q9HC56 1237 aa17.27■□□□□ 0.36
SNX1-203ENST00000558040 NEDD8-MDP1E9PL57 170 aa17.26■□□□□ 0.35
SNX1-203ENST00000558040 TUBBP07437 444 aa17.26■□□□□ 0.35
SNX1-203ENST00000558040 PSMC3P17980 439 aa17.26■□□□□ 0.35
SNX1-203ENST00000558040 TERF1P54274 439 aa17.26■□□□□ 0.35
SNX1-203ENST00000558040 MRPS25P82663 173 aaKnown RBP17.26■□□□□ 0.35
SNX1-203ENST00000558040 SLC7A5Q01650 507 aa17.26■□□□□ 0.35
SNX1-203ENST00000558040 FCHO2Q0JRZ9 810 aa17.26■□□□□ 0.35
SNX1-203ENST00000558040 SERINC3Q13530 473 aa17.26■□□□□ 0.35
SNX1-203ENST00000558040 P3H1Q32P28 736 aa17.26■□□□□ 0.35
SNX1-203ENST00000558040 CXorf57Q6NSI4 855 aaKnown RBP17.26■□□□□ 0.35
SNX1-203ENST00000558040 C4orf22Q6V702 233 aa17.26■□□□□ 0.35
SNX1-203ENST00000558040 B4GALNT4Q76KP1 1039 aa17.26■□□□□ 0.35
SNX1-203ENST00000558040 FIBINQ8TAL6 211 aa17.26■□□□□ 0.35
SNX1-203ENST00000558040 NSMCE1Q8WV22 266 aa17.26■□□□□ 0.35
SNX1-203ENST00000558040 ARHGEF2Q92974 986 aaKnown RBP17.26■□□□□ 0.35
SNX1-203ENST00000558040 FATE1Q969F0 183 aa17.26■□□□□ 0.35
SNX1-203ENST00000558040 P2RY11Q96G91 374 aa17.26■□□□□ 0.35
SNX1-203ENST00000558040 VAT1Q99536 393 aa17.26■□□□□ 0.35
SNX1-203ENST00000558040 ERP44Q9BS26 406 aa17.26■□□□□ 0.35
SNX1-203ENST00000558040 TRIM51Q9BSJ1 452 aa17.26■□□□□ 0.35
SNX1-203ENST00000558040 MUC3BQ9H195 1237 aa17.26■□□□□ 0.35
SNX1-203ENST00000558040 C10orf88Q9H8K7 445 aa17.26■□□□□ 0.35
SNX1-203ENST00000558040 USP29Q9HBJ7 922 aa17.26■□□□□ 0.35
SNX1-203ENST00000558040 KIAA1522Q9P206 1035 aaPredicted RBP17.26■□□□□ 0.35
SNX1-203ENST00000558040 ASIC3Q9UHC3 531 aa17.26■□□□□ 0.35
SNX1-203ENST00000558040 IPO11Q9UI26 975 aaKnown RBP17.26■□□□□ 0.35
SNX1-203ENST00000558040 HPCAL4Q9UM19 191 aa17.26■□□□□ 0.35
SNX1-203ENST00000558040 MAFKO60675 156 aa17.25■□□□□ 0.35
SNX1-203ENST00000558040 CYP17A1P05093 508 aa17.25■□□□□ 0.35
SNX1-203ENST00000558040 ADH5P11766 374 aa17.25■□□□□ 0.35
SNX1-203ENST00000558040 TYRP14679 529 aa17.25■□□□□ 0.35
SNX1-203ENST00000558040 VAV1P15498 845 aa17.25■□□□□ 0.35
SNX1-203ENST00000558040 MCM3P25205 808 aa17.25■□□□□ 0.35
SNX1-203ENST00000558040 GDF10P55107 478 aa17.25■□□□□ 0.35
SNX1-203ENST00000558040 GUCY2DQ02846 1103 aa17.25■□□□□ 0.35
SNX1-203ENST00000558040 GAD2Q05329 585 aa17.25■□□□□ 0.35
SNX1-203ENST00000558040 IL10RBQ08334 325 aa17.25■□□□□ 0.35
SNX1-203ENST00000558040 NR1H3Q13133 447 aa17.25■□□□□ 0.35
SNX1-203ENST00000558040 SLC12A1Q13621 1099 aa17.25■□□□□ 0.35
SNX1-203ENST00000558040 DHCR24Q15392 516 aa17.25■□□□□ 0.35
SNX1-203ENST00000558040 RNF219Q5W0B1 726 aaPredicted RBP17.25■□□□□ 0.35
SNX1-203ENST00000558040 IL31Q6EBC2 164 aa17.25■□□□□ 0.35
SNX1-203ENST00000558040 RHBDF2Q6PJF5 856 aa17.25■□□□□ 0.35
SNX1-203ENST00000558040 PARM1Q6UWI2 310 aa17.25■□□□□ 0.35
SNX1-203ENST00000558040 IFT20Q8IY31 132 aa17.25■□□□□ 0.35
SNX1-203ENST00000558040 CPA6Q8N4T0 437 aa17.25■□□□□ 0.35
SNX1-203ENST00000558040 XPO6Q96QU8 1125 aaKnown RBP17.25■□□□□ 0.35
SNX1-203ENST00000558040 KXD1Q9BQD3 176 aa17.25■□□□□ 0.35
SNX1-203ENST00000558040 SLC2A11Q9BYW1 496 aa17.25■□□□□ 0.35
SNX1-203ENST00000558040 PLK2Q9NYY3 685 aa17.25■□□□□ 0.35
SNX1-203ENST00000558040 SEPT10Q9P0V9 454 aa17.25■□□□□ 0.35
SNX1-203ENST00000558040 PAK5Q9P286 719 aa17.25■□□□□ 0.35
SNX1-203ENST00000558040 NEU2Q9Y3R4 380 aa17.25■□□□□ 0.35
SNX1-203ENST00000558040 DOCK8Q8NF50 2099 aa17.24■□□□□ 0.35
SNX1-203ENST00000558040 C5orf60A6NFR6 353 aa17.24■□□□□ 0.35
SNX1-203ENST00000558040 RNF103O00237 685 aa17.24■□□□□ 0.35
SNX1-203ENST00000558040 NDC80O14777 642 aa17.24■□□□□ 0.35
SNX1-203ENST00000558040 MATN3O15232 486 aa17.24■□□□□ 0.35
SNX1-203ENST00000558040 HOXC11O43248 304 aaPredicted RBP17.24■□□□□ 0.35
SNX1-203ENST00000558040 GCATO75600 419 aa17.24■□□□□ 0.35
SNX1-203ENST00000558040 NEBLO76041 1014 aa17.24■□□□□ 0.35
SNX1-203ENST00000558040 ACVRL1P37023 503 aa17.24■□□□□ 0.35
SNX1-203ENST00000558040 CLCN6P51797 869 aa17.24■□□□□ 0.35
SNX1-203ENST00000558040 TRIP13Q15645 432 aaPredicted RBP17.24■□□□□ 0.35
SNX1-203ENST00000558040 ELF2Q15723 593 aa17.24■□□□□ 0.35
SNX1-203ENST00000558040 PUS10Q3MIT2 529 aaKnown RBP17.24■□□□□ 0.35
SNX1-203ENST00000558040 LEXMQ3ZCV2 418 aa17.24■□□□□ 0.35
SNX1-203ENST00000558040 TRIM68Q6AZZ1 485 aa17.24■□□□□ 0.35
SNX1-203ENST00000558040 PLCD3Q8N3E9 789 aa17.24■□□□□ 0.35
SNX1-203ENST00000558040 OR7D4Q8NG98 312 aa17.24■□□□□ 0.35
SNX1-203ENST00000558040 LRRN4Q8WUT4 740 aa17.24■□□□□ 0.35
SNX1-203ENST00000558040 FGF14Q92915 247 aa17.24■□□□□ 0.35
SNX1-203ENST00000558040 LRRC45Q96CN5 670 aa17.24■□□□□ 0.35
SNX1-203ENST00000558040 ASIC4Q96FT7 647 aa17.24■□□□□ 0.35
SNX1-203ENST00000558040 FAM83CQ9BQN1 747 aa17.24■□□□□ 0.35
SNX1-203ENST00000558040 SPON2Q9BUD6 331 aa17.24■□□□□ 0.35
SNX1-203ENST00000558040 TRMT61BQ9BVS5 477 aaKnown RBP17.24■□□□□ 0.35
SNX1-203ENST00000558040 ANKZF1Q9H8Y5 726 aa17.24■□□□□ 0.35
SNX1-203ENST00000558040 EPB41L5Q9HCM4 733 aa17.24■□□□□ 0.35
SNX1-203ENST00000558040 ATP13A1Q9HD20 1204 aa17.24■□□□□ 0.35
SNX1-203ENST00000558040 HAUS2Q9NVX0 235 aa17.24■□□□□ 0.35
SNX1-203ENST00000558040 DMGDHQ9UI17 866 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms