RNA–Protein interactions for RNA: ENST00000557726.1

RDH11-211, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 621 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-211ENST00000557726 SPAG5Q96R06 1193 aa13.16□□□□□ -0.3
RDH11-211ENST00000557726 CPXM1Q96SM3 734 aa13.16□□□□□ -0.3
RDH11-211ENST00000557726 PRMT1Q99873 361 aaKnown RBP13.16□□□□□ -0.3
RDH11-211ENST00000557726 SYNCQ9H7C4 482 aa13.16□□□□□ -0.3
RDH11-211ENST00000557726 ASNSD1Q9NWL6 643 aa13.16□□□□□ -0.3
RDH11-211ENST00000557726 A0A1W2PR77 199 aa13.15□□□□□ -0.3
RDH11-211ENST00000557726 BECN2A8MW95 431 aa13.15□□□□□ -0.3
RDH11-211ENST00000557726 TLR4O00206 839 aa13.15□□□□□ -0.3
RDH11-211ENST00000557726 WNT9AO14904 365 aa13.15□□□□□ -0.3
RDH11-211ENST00000557726 RTN2O75298 545 aa13.15□□□□□ -0.3
RDH11-211ENST00000557726 MAT2AP31153 395 aaKnown RBP13.15□□□□□ -0.3
RDH11-211ENST00000557726 KRT9P35527 623 aa13.15□□□□□ -0.3
RDH11-211ENST00000557726 PLK1P53350 603 aa13.15□□□□□ -0.3
RDH11-211ENST00000557726 PPP2CBP62714 309 aa13.15□□□□□ -0.3
RDH11-211ENST00000557726 PPP2CAP67775 309 aa13.15□□□□□ -0.3
RDH11-211ENST00000557726 CENPCQ03188 943 aa13.15□□□□□ -0.3
RDH11-211ENST00000557726 PTK2Q05397 1052 aa13.15□□□□□ -0.3
RDH11-211ENST00000557726 AUHQ13825 339 aaKnown RBP13.15□□□□□ -0.3
RDH11-211ENST00000557726 SMAD1Q15797 465 aaKnown RBP13.15□□□□□ -0.3
RDH11-211ENST00000557726 EXOC3L4Q17RC7 722 aa13.15□□□□□ -0.3
RDH11-211ENST00000557726 POM121L1PQ3SYA9 428 aa13.15□□□□□ -0.3
RDH11-211ENST00000557726 NAPEPLDQ6IQ20 393 aa13.15□□□□□ -0.3
RDH11-211ENST00000557726 C11orf57Q6ZUT1 292 aaPredicted RBP13.15□□□□□ -0.3
RDH11-211ENST00000557726 FAM183BPQ6ZVS7 135 aa13.15□□□□□ -0.3
RDH11-211ENST00000557726 PDZD3Q86UT5 571 aa13.15□□□□□ -0.3
RDH11-211ENST00000557726 TMPRSS12Q86WS5 348 aa13.15□□□□□ -0.3
RDH11-211ENST00000557726 EID2Q8N6I1 236 aa13.15□□□□□ -0.3
RDH11-211ENST00000557726 SIK2Q9H0K1 926 aa13.15□□□□□ -0.3
RDH11-211ENST00000557726 APEX2Q9UBZ4 518 aa13.15□□□□□ -0.3
RDH11-211ENST00000557726 RWDD2AQ9UIY3 292 aa13.15□□□□□ -0.3
RDH11-211ENST00000557726 VPS28Q9UK41 221 aa13.15□□□□□ -0.3
RDH11-211ENST00000557726 VANGL2Q9ULK5 521 aa13.15□□□□□ -0.3
RDH11-211ENST00000557726 GTF3C3Q9Y5Q9 886 aa13.15□□□□□ -0.3
RDH11-211ENST00000557726 ZZEF1O43149 2961 aa13.15□□□□□ -0.3
RDH11-211ENST00000557726 TDRD6O60522 2096 aaKnown RBP13.14□□□□□ -0.31
RDH11-211ENST00000557726 COL5A1P20908 1838 aaPredicted RBP13.14□□□□□ -0.31
RDH11-211ENST00000557726 C1QTNF3-AMACRE9PGA6 284 aa13.14□□□□□ -0.31
RDH11-211ENST00000557726 CBX4O00257 560 aa13.14□□□□□ -0.31
RDH11-211ENST00000557726 SLC7A4O43246 635 aa13.14□□□□□ -0.31
RDH11-211ENST00000557726 JUPP14923 745 aa13.14□□□□□ -0.31
RDH11-211ENST00000557726 DRD3P35462 400 aa13.14□□□□□ -0.31
RDH11-211ENST00000557726 HNF1BP35680 557 aa13.14□□□□□ -0.31
RDH11-211ENST00000557726 GGCXP38435 758 aa13.14□□□□□ -0.31
RDH11-211ENST00000557726 MTIF2P46199 727 aaKnown RBP13.14□□□□□ -0.31
RDH11-211ENST00000557726 METAP1P53582 386 aa13.14□□□□□ -0.31
RDH11-211ENST00000557726 NXPH1P58417 271 aa13.14□□□□□ -0.31
RDH11-211ENST00000557726 APBA1Q02410 837 aa13.14□□□□□ -0.31
RDH11-211ENST00000557726 DNAJC3Q13217 504 aa13.14□□□□□ -0.31
RDH11-211ENST00000557726 MTA1Q13330 715 aa13.14□□□□□ -0.31
RDH11-211ENST00000557726 EIF4EBP2Q13542 120 aaPredicted RBP13.14□□□□□ -0.31
RDH11-211ENST00000557726 STAT4Q14765 748 aa13.14□□□□□ -0.31
RDH11-211ENST00000557726 SHBQ15464 509 aa13.14□□□□□ -0.31
RDH11-211ENST00000557726 DLG2Q15700 870 aa13.14□□□□□ -0.31
RDH11-211ENST00000557726 TPD52L1Q16890 204 aaPredicted RBP13.14□□□□□ -0.31
RDH11-211ENST00000557726 CXorf57Q6NSI4 855 aaKnown RBP13.14□□□□□ -0.31
RDH11-211ENST00000557726 OXR1Q8N573 874 aa13.14□□□□□ -0.31
RDH11-211ENST00000557726 WDTC1Q8N5D0 677 aa13.14□□□□□ -0.31
RDH11-211ENST00000557726 C1orf131Q8NDD1 294 aaKnown RBP13.14□□□□□ -0.31
RDH11-211ENST00000557726 SAP25Q8TEE9 199 aa13.14□□□□□ -0.31
RDH11-211ENST00000557726 FRS2Q8WU20 508 aa13.14□□□□□ -0.31
RDH11-211ENST00000557726 FEM1AQ9BSK4 669 aa13.14□□□□□ -0.31
RDH11-211ENST00000557726 MUC3BQ9H195 1237 aa13.14□□□□□ -0.31
RDH11-211ENST00000557726 DKK4Q9UBT3 224 aa13.14□□□□□ -0.31
RDH11-211ENST00000557726 PCDHGC3Q9UN70 934 aa13.14□□□□□ -0.31
RDH11-211ENST00000557726 FARP1Q9Y4F1 1045 aaPredicted RBP13.14□□□□□ -0.31
RDH11-211ENST00000557726 PCDHGA1Q9Y5H4 931 aa13.14□□□□□ -0.31
RDH11-211ENST00000557726 HS3ST4Q9Y661 456 aa13.14□□□□□ -0.31
RDH11-211ENST00000557726 DMXL2Q8TDJ6 3036 aa13.14□□□□□ -0.31
RDH11-211ENST00000557726 ASPMQ8IZT6 3477 aa13.13□□□□□ -0.31
RDH11-211ENST00000557726 M0QYT0 321 aa13.13□□□□□ -0.31
RDH11-211ENST00000557726 LATO43561 262 aa13.13□□□□□ -0.31
RDH11-211ENST00000557726 PLRG1O43660 514 aaKnown RBP13.13□□□□□ -0.31
RDH11-211ENST00000557726 ATP9BO43861 1147 aa13.13□□□□□ -0.31
RDH11-211ENST00000557726 MAGEC1O60732 1142 aa13.13□□□□□ -0.31
RDH11-211ENST00000557726 PAGE1O75459 146 aa13.13□□□□□ -0.31
RDH11-211ENST00000557726 CLDN11O75508 207 aa13.13□□□□□ -0.31
RDH11-211ENST00000557726 DAB1O75553 588 aa13.13□□□□□ -0.31
RDH11-211ENST00000557726 RFPL3O75679 317 aa13.13□□□□□ -0.31
RDH11-211ENST00000557726 ERBB2P04626 1255 aa13.13□□□□□ -0.31
RDH11-211ENST00000557726 C1SP09871 688 aa13.13□□□□□ -0.31
RDH11-211ENST00000557726 CDK4P11802 303 aa13.13□□□□□ -0.31
RDH11-211ENST00000557726 EPHA8P29322 1005 aaPredicted RBP13.13□□□□□ -0.31
RDH11-211ENST00000557726 NUDT1P36639 197 aa13.13□□□□□ -0.31
RDH11-211ENST00000557726 IRAK1P51617 712 aa13.13□□□□□ -0.31
RDH11-211ENST00000557726 RNASE9P60153 205 aaKnown RBP13.13□□□□□ -0.31
RDH11-211ENST00000557726 SLC6A3Q01959 620 aa13.13□□□□□ -0.31
RDH11-211ENST00000557726 CNTN1Q12860 1018 aa13.13□□□□□ -0.31
RDH11-211ENST00000557726 BNIP3Q12983 259 aa13.13□□□□□ -0.31
RDH11-211ENST00000557726 CAMK2BQ13554 666 aa13.13□□□□□ -0.31
RDH11-211ENST00000557726 CAMK4Q16566 473 aa13.13□□□□□ -0.31
RDH11-211ENST00000557726 Q6ZVU0 165 aa13.13□□□□□ -0.31
RDH11-211ENST00000557726 MFSD2AQ8NA29 543 aa13.13□□□□□ -0.31
RDH11-211ENST00000557726 PIP4K2CQ8TBX8 421 aa13.13□□□□□ -0.31
RDH11-211ENST00000557726 SHC3Q92529 594 aa13.13□□□□□ -0.31
RDH11-211ENST00000557726 LRIG1Q96JA1 1093 aa13.13□□□□□ -0.31
RDH11-211ENST00000557726 PDCL3Q9H2J4 239 aa13.13□□□□□ -0.31
RDH11-211ENST00000557726 KDM4CQ9H3R0 1056 aa13.13□□□□□ -0.31
RDH11-211ENST00000557726 KIAA1468Q9P260 1216 aa13.13□□□□□ -0.31
RDH11-211ENST00000557726 SARDHQ9UL12 918 aa13.13□□□□□ -0.31
RDH11-211ENST00000557726 DMTF1Q9Y222 760 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms