RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 RPL7AP62424 266 aaKnown RBP8.56□□□□□ -1.04
PSEN1-223ENST00000557511 DMWDQ09019 674 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 MAMLD1Q13495 774 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 ACAP1Q15027 740 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 HADHQ16836 314 aaKnown RBP8.56□□□□□ -1.04
PSEN1-223ENST00000557511 TTC31Q49AM3 519 aaPredicted RBP8.56□□□□□ -1.04
PSEN1-223ENST00000557511 ACCSLQ4AC99 568 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 C4orf48Q5BLP8 95 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 HGSNATQ68CP4 663 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 RETSATQ6NUM9 610 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 DSG4Q86SJ6 1040 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 SETD3Q86TU7 594 aaPredicted RBP8.56□□□□□ -1.04
PSEN1-223ENST00000557511 RASSF3Q86WH2 238 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 CIR1Q86X95 450 aaPredicted RBP8.56□□□□□ -1.04
PSEN1-223ENST00000557511 ZNF354CQ86Y25 554 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 KDM1BQ8NB78 822 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 MDGA1Q8NFP4 955 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 GANCQ8TET4 914 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 FNIP1Q8TF40 1166 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 CYB5D2Q8WUJ1 264 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 SORCS1Q8WY21 1168 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 CENPIQ92674 756 aaPredicted RBP8.56□□□□□ -1.04
PSEN1-223ENST00000557511 HPS1Q92902 700 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 IGSF8Q969P0 613 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 NTAN1Q96AB6 310 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 TTC17Q96AE7 1141 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 SIPA1Q96FS4 1042 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 ACOX2Q99424 681 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 EIF3CQ99613 913 aaKnown RBP8.56□□□□□ -1.04
PSEN1-223ENST00000557511 DNAJC7Q99615 494 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 SYT11Q9BT88 431 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 ISCUQ9H1K1 167 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 OSBPL2Q9H1P3 480 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 CATSPERBQ9H7T0 1116 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 PRDM16Q9HAZ2 1276 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 ABHD10Q9NUJ1 306 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 POLR3BQ9NW08 1133 aaPredicted RBP8.56□□□□□ -1.04
PSEN1-223ENST00000557511 C2orf42Q9NWW7 574 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 PPARGC1AQ9UBK2 798 aaKnown RBP8.56□□□□□ -1.04
PSEN1-223ENST00000557511 OR12D3Q9UGF7 316 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 IP6K2Q9UHH9 426 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 HPCAL4Q9UM19 191 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 NCKAP1Q9Y2A7 1128 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 RAD54BQ9Y620 910 aa8.56□□□□□ -1.04
PSEN1-223ENST00000557511 TRIOO75962 3097 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 A0A087X0T9 212 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 TMEM191CA6NGB0 347 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 DRGXA6NNA5 263 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 WASH3PC4AMC7 463 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 MYO1FO00160 1098 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 ST8SIA5O15466 376 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 AP5Z1O43299 807 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 CREB3O43889 395 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 FOXD2O60548 495 aaPredicted RBP8.55□□□□□ -1.04
PSEN1-223ENST00000557511 DNTTP04053 509 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 RETP07949 1114 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 H2AFZP0C0S5 128 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 FAM228BP0C875 321 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 OXTRP30559 389 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 HNRNPH3P31942 346 aaKnown RBP8.55□□□□□ -1.04
PSEN1-223ENST00000557511 HTR7P34969 479 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 RECQLP46063 649 aaPredicted RBP8.55□□□□□ -1.04
PSEN1-223ENST00000557511 MAPKAPK2P49137 400 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 ZNF135P52742 658 aaPredicted RBP8.55□□□□□ -1.04
PSEN1-223ENST00000557511 PLK1P53350 603 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 ADKP55263 362 aaKnown RBP8.55□□□□□ -1.04
PSEN1-223ENST00000557511 HDAC4P56524 1084 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 NRG1Q02297 640 aaPredicted RBP8.55□□□□□ -1.04
PSEN1-223ENST00000557511 PIGHQ14442 188 aaPredicted RBP8.55□□□□□ -1.04
PSEN1-223ENST00000557511 SLC18A3Q16572 532 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 LPAL2Q16609 132 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 FUT11Q495W5 492 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 C5orf22Q49AR2 442 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 FSCBQ5H9T9 825 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 OTUD1Q5VV17 481 aaPredicted RBP8.55□□□□□ -1.04
PSEN1-223ENST00000557511 E4F1Q66K89 784 aaPredicted RBP8.55□□□□□ -1.04
PSEN1-223ENST00000557511 RNF43Q68DV7 783 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 IL31Q6EBC2 164 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 TRNP1Q6NT89 227 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 ZNF783Q6ZMS7 281 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 H2AFVQ71UI9 128 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 LPCAT2Q7L5N7 544 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 TFAP2DQ7Z6R9 452 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 KIAA0907Q7Z7F0 614 aaPredicted RBP8.55□□□□□ -1.04
PSEN1-223ENST00000557511 C14orf80Q86SX3 495 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 ADIPOR2Q86V24 386 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 OR2T3Q8NH03 318 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 WFDC5Q8TCV5 224 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 ERLEC1Q96DZ1 483 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 MRFAP1L1Q96HT8 127 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 LOXL4Q96JB6 756 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 SPON2Q9BUD6 331 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 RBSNQ9H1K0 784 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 PRM3Q9NNZ6 103 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 MPP6Q9NZW5 540 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 CALCOCO1Q9P1Z2 691 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 CTTNBP2NLQ9P2B4 639 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 ARHGAP20Q9P2F6 1191 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 ERVW-1Q9UQF0 538 aa8.55□□□□□ -1.04
PSEN1-223ENST00000557511 EDDM13A0A1B0GTR0 161 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms