RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 ELAVL3Q14576 367 aaKnown RBP14.18□□□□□ -0.14
VPS33B-206ENST00000557358 FAM46CQ5VWP2 391 aa14.18□□□□□ -0.14
VPS33B-206ENST00000557358 IL31Q6EBC2 164 aa14.18□□□□□ -0.14
VPS33B-206ENST00000557358 TRNP1Q6NT89 227 aa14.18□□□□□ -0.14
VPS33B-206ENST00000557358 TMC6Q7Z403 805 aa14.18□□□□□ -0.14
VPS33B-206ENST00000557358 CADM4Q8NFZ8 388 aa14.18□□□□□ -0.14
VPS33B-206ENST00000557358 TOE1Q96GM8 510 aaKnown RBP14.18□□□□□ -0.14
VPS33B-206ENST00000557358 RPL10LQ96L21 214 aaKnown RBP14.18□□□□□ -0.14
VPS33B-206ENST00000557358 HSPA12BQ96MM6 686 aa14.18□□□□□ -0.14
VPS33B-206ENST00000557358 SPON2Q9BUD6 331 aa14.18□□□□□ -0.14
VPS33B-206ENST00000557358 BTBD1Q9H0C5 482 aa14.18□□□□□ -0.14
VPS33B-206ENST00000557358 PCED1AQ9H1Q7 454 aa14.18□□□□□ -0.14
VPS33B-206ENST00000557358 SLC6A17Q9H1V8 727 aa14.18□□□□□ -0.14
VPS33B-206ENST00000557358 CATSPERBQ9H7T0 1116 aa14.18□□□□□ -0.14
VPS33B-206ENST00000557358 CD248Q9HCU0 757 aa14.18□□□□□ -0.14
VPS33B-206ENST00000557358 PARD6AQ9NPB6 346 aa14.18□□□□□ -0.14
VPS33B-206ENST00000557358 MPP6Q9NZW5 540 aa14.18□□□□□ -0.14
VPS33B-206ENST00000557358 CNOT8Q9UFF9 292 aaKnown RBP14.18□□□□□ -0.14
VPS33B-206ENST00000557358 ADAMTS1Q9UHI8 967 aa14.18□□□□□ -0.14
VPS33B-206ENST00000557358 MBD1Q9UIS9 605 aaPredicted RBP14.18□□□□□ -0.14
VPS33B-206ENST00000557358 PI4KAP42356 2102 aa14.18□□□□□ -0.14
VPS33B-206ENST00000557358 DOCK4Q8N1I0 1966 aa14.17□□□□□ -0.14
VPS33B-206ENST00000557358 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.17□□□□□ -0.14
VPS33B-206ENST00000557358 EIF3CLB5ME19 914 aaKnown RBP14.17□□□□□ -0.14
VPS33B-206ENST00000557358 C1QTNF3-AMACRE9PGA6 284 aa14.17□□□□□ -0.14
VPS33B-206ENST00000557358 DDX3XO00571 662 aaKnown RBP eCLIP14.17□□□□□ -0.149e-12■■□□□ 11.6
VPS33B-206ENST00000557358 CCP110O43303 1012 aa14.17□□□□□ -0.14
VPS33B-206ENST00000557358 SIN3BO75182 1162 aa14.17□□□□□ -0.14
VPS33B-206ENST00000557358 CNTN5O94779 1100 aa14.17□□□□□ -0.14
VPS33B-206ENST00000557358 ADH1BP00325 375 aa14.17□□□□□ -0.14
VPS33B-206ENST00000557358 RHOQP17081 205 aa14.17□□□□□ -0.14
VPS33B-206ENST00000557358 CTSOP43234 321 aaPredicted RBP14.17□□□□□ -0.14
VPS33B-206ENST00000557358 MAPKAPK2P49137 400 aa14.17□□□□□ -0.14
VPS33B-206ENST00000557358 VASPP50552 380 aaPredicted RBP14.17□□□□□ -0.14
VPS33B-206ENST00000557358 HDAC4P56524 1084 aa14.17□□□□□ -0.14
VPS33B-206ENST00000557358 SLC20A2Q08357 652 aa14.17□□□□□ -0.14
VPS33B-206ENST00000557358 SCAPQ12770 1279 aa14.17□□□□□ -0.14
VPS33B-206ENST00000557358 MAMLD1Q13495 774 aa14.17□□□□□ -0.14
VPS33B-206ENST00000557358 CCDC6Q16204 474 aa14.17□□□□□ -0.14
VPS33B-206ENST00000557358 DUOXA1Q1HG43 343 aa14.17□□□□□ -0.14
VPS33B-206ENST00000557358 RSPO4Q2I0M5 234 aaPredicted RBP14.17□□□□□ -0.14
VPS33B-206ENST00000557358 ALFQ53S48 1182 aa14.17□□□□□ -0.14
VPS33B-206ENST00000557358 PLA2G2CQ5R387 149 aa14.17□□□□□ -0.14
VPS33B-206ENST00000557358 PLEKHA7Q6IQ23 1121 aa14.17□□□□□ -0.14
VPS33B-206ENST00000557358 FAM124AQ86V42 546 aa14.17□□□□□ -0.14
VPS33B-206ENST00000557358 ZNF354CQ86Y25 554 aa14.17□□□□□ -0.14
VPS33B-206ENST00000557358 DCAF4L2Q8NA75 395 aa14.17□□□□□ -0.14
VPS33B-206ENST00000557358 ATP11CQ8NB49 1132 aa14.17□□□□□ -0.14
VPS33B-206ENST00000557358 OR8D1Q8WZ84 308 aa14.17□□□□□ -0.14
VPS33B-206ENST00000557358 MRGPRX3Q96LB0 322 aa14.17□□□□□ -0.14
VPS33B-206ENST00000557358 EIF3CQ99613 913 aaKnown RBP14.17□□□□□ -0.14
VPS33B-206ENST00000557358 OMDQ99983 421 aa14.17□□□□□ -0.14
VPS33B-206ENST00000557358 RTKNQ9BST9 563 aa14.17□□□□□ -0.14
VPS33B-206ENST00000557358 SYT11Q9BT88 431 aa14.17□□□□□ -0.14
VPS33B-206ENST00000557358 GPR174Q9BXC1 333 aa14.17□□□□□ -0.14
VPS33B-206ENST00000557358 ADAM33Q9BZ11 813 aa14.17□□□□□ -0.14
VPS33B-206ENST00000557358 RSPH9Q9H1X1 276 aaPredicted RBP14.17□□□□□ -0.14
VPS33B-206ENST00000557358 SGK2Q9HBY8 427 aa14.17□□□□□ -0.14
VPS33B-206ENST00000557358 ATP13A1Q9HD20 1204 aa14.17□□□□□ -0.14
VPS33B-206ENST00000557358 WSB2Q9NYS7 404 aaPredicted RBP14.17□□□□□ -0.14
VPS33B-206ENST00000557358 TAS2R14Q9NYV8 317 aa14.17□□□□□ -0.14
VPS33B-206ENST00000557358 MYO1AQ9UBC5 1043 aa14.17□□□□□ -0.14
VPS33B-206ENST00000557358 SLCO3A1Q9UIG8 710 aa14.17□□□□□ -0.14
VPS33B-206ENST00000557358 SNX10Q9Y5X0 201 aa14.17□□□□□ -0.14
VPS33B-206ENST00000557358 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.17□□□□□ -0.14
VPS33B-206ENST00000557358 DMDP11532 3685 aa14.16□□□□□ -0.14
VPS33B-206ENST00000557358 TTC34A8MYJ7 566 aa14.16□□□□□ -0.14
VPS33B-206ENST00000557358 PRPSAP2O60256 369 aa14.16□□□□□ -0.14
VPS33B-206ENST00000557358 IGLV3-19P01714 112 aa14.16□□□□□ -0.14
VPS33B-206ENST00000557358 CFIP05156 583 aa14.16□□□□□ -0.14
VPS33B-206ENST00000557358 CASP14P31944 242 aa14.16□□□□□ -0.14
VPS33B-206ENST00000557358 L1CAMP32004 1257 aa14.16□□□□□ -0.14
VPS33B-206ENST00000557358 HTR7P34969 479 aa14.16□□□□□ -0.14
VPS33B-206ENST00000557358 CLCN6P51797 869 aa14.16□□□□□ -0.14
VPS33B-206ENST00000557358 RPS14P62263 151 aaKnown RBP14.16□□□□□ -0.14
VPS33B-206ENST00000557358 RPL7AP62424 266 aaKnown RBP14.16□□□□□ -0.14
VPS33B-206ENST00000557358 TRIM61Q5EBN2 209 aa14.16□□□□□ -0.14
VPS33B-206ENST00000557358 SH3PXD2AQ5TCZ1 1133 aa14.16□□□□□ -0.14
VPS33B-206ENST00000557358 SARM1Q6SZW1 724 aa14.16□□□□□ -0.14
VPS33B-206ENST00000557358 USP30Q70CQ3 517 aa14.16□□□□□ -0.14
VPS33B-206ENST00000557358 MMAAQ8IVH4 418 aaKnown RBP14.16□□□□□ -0.14
VPS33B-206ENST00000557358 DRC7Q8IY82 874 aa14.16□□□□□ -0.14
VPS33B-206ENST00000557358 DEFB119Q8N690 84 aa14.16□□□□□ -0.14
VPS33B-206ENST00000557358 FRMD1Q8N878 549 aa14.16□□□□□ -0.14
VPS33B-206ENST00000557358 OR8K1Q8NGG5 319 aa14.16□□□□□ -0.14
VPS33B-206ENST00000557358 FNIP1Q8TF40 1166 aa14.16□□□□□ -0.14
VPS33B-206ENST00000557358 ZNF419Q96HQ0 510 aaPredicted RBP14.16□□□□□ -0.14
VPS33B-206ENST00000557358 ANLNQ9NQW6 1124 aa14.16□□□□□ -0.14
VPS33B-206ENST00000557358 TMPRSS4Q9NRS4 437 aa14.16□□□□□ -0.14
VPS33B-206ENST00000557358 EVLQ9UI08 416 aaPredicted RBP14.16□□□□□ -0.14
VPS33B-206ENST00000557358 CFAP54Q96N23 3096 aa14.16□□□□□ -0.14
VPS33B-206ENST00000557358 ZNF292O60281 2723 aa14.16□□□□□ -0.14
VPS33B-206ENST00000557358 TCRBV5S1A1TA0A578 114 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 LRRC72A6NJI9 287 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 CBX4O00257 560 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 ALOX15BO15296 676 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 FGF10O15520 208 aaPredicted RBP14.15□□□□□ -0.14
VPS33B-206ENST00000557358 DAPK3O43293 454 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 ATP9BO43861 1147 aa14.15□□□□□ -0.14
VPS33B-206ENST00000557358 CREB3O43889 395 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms