RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 TRPA1O75762 1119 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 TXNP10599 105 aaKnown RBP11.63□□□□□ -0.55
SRP54-213ENST00000556994 ACAT1P24752 427 aaKnown RBP11.63□□□□□ -0.55
SRP54-213ENST00000556994 AVPR1AP37288 418 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 SULT1E1P49888 294 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 SERPINB8P50452 374 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 LIMK2P53671 638 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 CDKL1Q00532 357 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 MYBPC1Q00872 1141 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 EN1Q05925 392 aaPredicted RBP11.63□□□□□ -0.55
SRP54-213ENST00000556994 MAP7Q14244 749 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 ZNF423Q2M1K9 1284 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 TBC1D25Q3MII6 688 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 DCAF6Q58WW2 860 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 ZNF618Q5T7W0 954 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 POTEAQ6S8J7 498 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 SLC26A9Q7LBE3 791 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.63□□□□□ -0.55
SRP54-213ENST00000556994 FAM81AQ8TBF8 368 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 NLRP7Q8WX94 980 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 PKP2Q99959 881 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 FERMT1Q9BQL6 677 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 ILKAPQ9H0C8 392 aaPredicted RBP11.63□□□□□ -0.55
SRP54-213ENST00000556994 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.63□□□□□ -0.551e-7■□□□□ 8.7
SRP54-213ENST00000556994 KLHL8Q9P2G9 620 aaPredicted RBP11.63□□□□□ -0.55
SRP54-213ENST00000556994 ZDHHC2Q9UIJ5 367 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 GNEQ9Y223 722 aaKnown RBP11.63□□□□□ -0.55
SRP54-213ENST00000556994 GINS2Q9Y248 185 aa11.63□□□□□ -0.55
SRP54-213ENST00000556994 MCM3APO60318 1980 aa11.62□□□□□ -0.55
SRP54-213ENST00000556994 hCG_2014768A0A024R1R8 64 aa11.62□□□□□ -0.55
SRP54-213ENST00000556994 A0A1B0GTW7 788 aa11.62□□□□□ -0.55
SRP54-213ENST00000556994 AP1G1O43747 822 aa11.62□□□□□ -0.55
SRP54-213ENST00000556994 PIGNO95427 931 aa11.62□□□□□ -0.55
SRP54-213ENST00000556994 ASLP04424 464 aa11.62□□□□□ -0.55
SRP54-213ENST00000556994 RPL5P46777 297 aaKnown RBP11.62□□□□□ -0.55
SRP54-213ENST00000556994 GRIA4P48058 902 aa11.62□□□□□ -0.55
SRP54-213ENST00000556994 NME3Q13232 169 aa11.62□□□□□ -0.55
SRP54-213ENST00000556994 CYLC2Q14093 348 aaPredicted RBP11.62□□□□□ -0.55
SRP54-213ENST00000556994 ADGRE1Q14246 886 aa11.62□□□□□ -0.55
SRP54-213ENST00000556994 MYLK3Q32MK0 819 aa11.62□□□□□ -0.55
SRP54-213ENST00000556994 Q3C1V9 767 aa11.62□□□□□ -0.55
SRP54-213ENST00000556994 PABPC1LQ4VXU2 614 aaKnown RBP11.62□□□□□ -0.55
SRP54-213ENST00000556994 ARL13AQ5H913 290 aaPredicted RBP11.62□□□□□ -0.55
SRP54-213ENST00000556994 SPANXN3Q5MJ09 141 aa11.62□□□□□ -0.55
SRP54-213ENST00000556994 RARS2Q5T160 578 aaKnown RBP11.62□□□□□ -0.55
SRP54-213ENST00000556994 BNC2Q6ZN30 1099 aaPredicted RBP11.62□□□□□ -0.55
SRP54-213ENST00000556994 SPNS2Q8IVW8 549 aa11.62□□□□□ -0.55
SRP54-213ENST00000556994 ZFP28Q8NHY6 868 aa11.62□□□□□ -0.55
SRP54-213ENST00000556994 RNF139Q8WU17 664 aa11.62□□□□□ -0.55
SRP54-213ENST00000556994 NAT9Q9BTE0 207 aa11.62□□□□□ -0.55
SRP54-213ENST00000556994 TASP1Q9H6P5 420 aa11.62□□□□□ -0.55
SRP54-213ENST00000556994 CHRAC1Q9NRG0 131 aa11.62□□□□□ -0.55
SRP54-213ENST00000556994 IARS2Q9NSE4 1012 aaKnown RBP11.62□□□□□ -0.55
SRP54-213ENST00000556994 SNTG2Q9NY99 539 aa11.62□□□□□ -0.55
SRP54-213ENST00000556994 UBP1Q9NZI7 540 aa11.62□□□□□ -0.55
SRP54-213ENST00000556994 ATXN10Q9UBB4 475 aa11.62□□□□□ -0.55
SRP54-213ENST00000556994 SLC39A10Q9ULF5 831 aa11.62□□□□□ -0.55
SRP54-213ENST00000556994 VANGL2Q9ULK5 521 aa11.62□□□□□ -0.55
SRP54-213ENST00000556994 CITO14578 2027 aa11.62□□□□□ -0.55
SRP54-213ENST00000556994 TNS1Q9HBL0 1735 aaKnown RBP11.62□□□□□ -0.55
SRP54-213ENST00000556994 ZCWPW2A0A1B0GU75 182 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 KPNA7A9QM74 516 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 MATN2O00339 956 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 PHGDHO43175 533 aaKnown RBP11.61□□□□□ -0.55
SRP54-213ENST00000556994 HNRNPRO43390 633 aaKnown RBP11.61□□□□□ -0.55
SRP54-213ENST00000556994 TOMM70O94826 608 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 TFEBP19484 476 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 MAGEA12P43365 314 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 NAGLUP54802 743 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 USP46P62068 366 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 NAB1Q13506 487 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 PIGGQ5H8A4 983 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 C16orf89Q6UX73 402 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 GADL1Q6ZQY3 521 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 PTAR1Q7Z6K3 402 aaPredicted RBP11.61□□□□□ -0.55
SRP54-213ENST00000556994 SPATA6LQ8N4H0 392 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 ZSCAN18Q8TBC5 510 aaPredicted RBP11.61□□□□□ -0.55
SRP54-213ENST00000556994 KBTBD7Q8WVZ9 684 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 TMA16Q96EY4 203 aaKnown RBP11.61□□□□□ -0.55
SRP54-213ENST00000556994 KLHL32Q96NJ5 620 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 SERPINI1Q99574 410 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 NPAS2Q99743 824 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 LRRC40Q9H9A6 602 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 PREBQ9HCU5 417 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 EIF2B3Q9NR50 452 aaKnown RBP11.61□□□□□ -0.55
SRP54-213ENST00000556994 C20orf96Q9NUD7 363 aaPredicted RBP11.61□□□□□ -0.55
SRP54-213ENST00000556994 OXSMQ9NWU1 459 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 GTF2IRD1Q9UHL9 959 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 RIMS3Q9UJD0 308 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 FAM72CH0Y354 149 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 GRID2O43424 1007 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 TSPAN1O60635 241 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 SETSIPP0DME0 302 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 RGS2P41220 211 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 GLUD2P49448 558 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 RPL14P50914 215 aaKnown RBP11.61□□□□□ -0.55
SRP54-213ENST00000556994 RABGGTBP53611 331 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 BST2Q10589 180 aaKnown RBP11.61□□□□□ -0.55
SRP54-213ENST00000556994 PDK1Q15118 436 aa11.61□□□□□ -0.55
SRP54-213ENST00000556994 FAM187BQ17R55 369 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms