RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 ACADMP11310 421 aa10.96□□□□□ -0.65
LINC00239-201ENST00000556973 EPHB2P29323 1055 aa10.96□□□□□ -0.65
LINC00239-201ENST00000556973 MIPP30301 263 aa10.96□□□□□ -0.65
LINC00239-201ENST00000556973 ETFBP38117 255 aa10.96□□□□□ -0.65
LINC00239-201ENST00000556973 MAPKAPK2P49137 400 aa10.96□□□□□ -0.65
LINC00239-201ENST00000556973 ZNF135P52742 658 aaPredicted RBP10.96□□□□□ -0.65
LINC00239-201ENST00000556973 GNA12Q03113 381 aa10.96□□□□□ -0.65
LINC00239-201ENST00000556973 SLC20A2Q08357 652 aa10.96□□□□□ -0.65
LINC00239-201ENST00000556973 HNRNPA1L2Q32P51 320 aaKnown RBP10.96□□□□□ -0.65
LINC00239-201ENST00000556973 MAP7D1Q3KQU3 841 aa10.96□□□□□ -0.65
LINC00239-201ENST00000556973 PLK5Q496M5 336 aa10.96□□□□□ -0.65
LINC00239-201ENST00000556973 BOLA3Q53S33 107 aa10.96□□□□□ -0.65
LINC00239-201ENST00000556973 SPDYCQ5MJ68 293 aa10.96□□□□□ -0.65
LINC00239-201ENST00000556973 C9orf64Q5T6V5 341 aa10.96□□□□□ -0.65
LINC00239-201ENST00000556973 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.96□□□□□ -0.65
LINC00239-201ENST00000556973 KBTBD6Q86V97 674 aa10.96□□□□□ -0.65
LINC00239-201ENST00000556973 NLRP14Q86W24 1093 aa10.96□□□□□ -0.65
LINC00239-201ENST00000556973 PYROXD2Q8N2H3 581 aa10.96□□□□□ -0.65
LINC00239-201ENST00000556973 ZNF366Q8N895 744 aa10.96□□□□□ -0.65
LINC00239-201ENST00000556973 NIPA2Q8N8Q9 360 aa10.96□□□□□ -0.65
LINC00239-201ENST00000556973 RLN3Q8WXF3 142 aa10.96□□□□□ -0.65
LINC00239-201ENST00000556973 PTPRN2Q92932 1015 aa10.96□□□□□ -0.65
LINC00239-201ENST00000556973 ARHGEF26Q96DR7 871 aa10.96□□□□□ -0.65
LINC00239-201ENST00000556973 ERLEC1Q96DZ1 483 aa10.96□□□□□ -0.65
LINC00239-201ENST00000556973 SIPA1Q96FS4 1042 aa10.96□□□□□ -0.65
LINC00239-201ENST00000556973 EPAS1Q99814 870 aa10.96□□□□□ -0.65
LINC00239-201ENST00000556973 MKRN2Q9H000 416 aaKnown RBP10.96□□□□□ -0.65
LINC00239-201ENST00000556973 SLC6A17Q9H1V8 727 aa10.96□□□□□ -0.65
LINC00239-201ENST00000556973 CATSPERBQ9H7T0 1116 aa10.96□□□□□ -0.65
LINC00239-201ENST00000556973 DONSONQ9NYP3 566 aa10.96□□□□□ -0.65
LINC00239-201ENST00000556973 NCDNQ9UBB6 729 aa10.96□□□□□ -0.65
LINC00239-201ENST00000556973 LCMT1Q9UIC8 334 aa10.96□□□□□ -0.65
LINC00239-201ENST00000556973 ANAPC7Q9UJX3 599 aa10.96□□□□□ -0.65
LINC00239-201ENST00000556973 GMEB2Q9UKD1 530 aa10.96□□□□□ -0.65
LINC00239-201ENST00000556973 USP18Q9UMW8 372 aa10.96□□□□□ -0.65
LINC00239-201ENST00000556973 AP4E1Q9UPM8 1137 aa10.96□□□□□ -0.65
LINC00239-201ENST00000556973 MUC6Q6W4X9 2439 aa10.96□□□□□ -0.66
LINC00239-201ENST00000556973 THADAQ6YHU6 1953 aa10.96□□□□□ -0.66
LINC00239-201ENST00000556973 CHD5Q8TDI0 1954 aa10.96□□□□□ -0.66
LINC00239-201ENST00000556973 NYNRINQ9P2P1 1898 aaKnown RBP10.95□□□□□ -0.66
LINC00239-201ENST00000556973 A0A0D9SEW6 157 aa10.95□□□□□ -0.66
LINC00239-201ENST00000556973 EDDM13A0A1B0GTR0 161 aa10.95□□□□□ -0.66
LINC00239-201ENST00000556973 CXorf51AA0A1B0GTR3 108 aa10.95□□□□□ -0.66
LINC00239-201ENST00000556973 WASH4PA8MWX3 477 aa10.95□□□□□ -0.66
LINC00239-201ENST00000556973 TTC34A8MYJ7 566 aa10.95□□□□□ -0.66
LINC00239-201ENST00000556973 FGF10O15520 208 aaPredicted RBP10.95□□□□□ -0.66
LINC00239-201ENST00000556973 ATP9BO43861 1147 aa10.95□□□□□ -0.66
LINC00239-201ENST00000556973 CREB3O43889 395 aa10.95□□□□□ -0.66
LINC00239-201ENST00000556973 RNASEH1O60930 286 aaKnown RBP10.95□□□□□ -0.66
LINC00239-201ENST00000556973 OXTRP30559 389 aa10.95□□□□□ -0.66
LINC00239-201ENST00000556973 HCAR3P49019 387 aa10.95□□□□□ -0.66
LINC00239-201ENST00000556973 NUMBP49757 651 aa10.95□□□□□ -0.66
LINC00239-201ENST00000556973 STK19P49842 368 aaPredicted RBP10.95□□□□□ -0.66
LINC00239-201ENST00000556973 ZBTB16Q05516 673 aa10.95□□□□□ -0.66
LINC00239-201ENST00000556973 SEMA3BQ13214 749 aa10.95□□□□□ -0.66
LINC00239-201ENST00000556973 LPAL2Q16609 132 aa10.95□□□□□ -0.66
LINC00239-201ENST00000556973 ACCSLQ4AC99 568 aa10.95□□□□□ -0.66
LINC00239-201ENST00000556973 IL31Q6EBC2 164 aa10.95□□□□□ -0.66
LINC00239-201ENST00000556973 RETSATQ6NUM9 610 aa10.95□□□□□ -0.66
LINC00239-201ENST00000556973 KIAA1324Q6UXG2 1013 aaKnown RBP10.95□□□□□ -0.66
LINC00239-201ENST00000556973 LPCAT2Q7L5N7 544 aa10.95□□□□□ -0.66
LINC00239-201ENST00000556973 CCDC170Q8IYT3 715 aa10.95□□□□□ -0.66
LINC00239-201ENST00000556973 SH2D3CQ8N5H7 860 aa10.95□□□□□ -0.66
LINC00239-201ENST00000556973 GPR161Q8N6U8 529 aaKnown RBP10.95□□□□□ -0.66
LINC00239-201ENST00000556973 RTL3Q8N8U3 475 aaKnown RBP10.95□□□□□ -0.66
LINC00239-201ENST00000556973 DCAF4L2Q8NA75 395 aa10.95□□□□□ -0.66
LINC00239-201ENST00000556973 ZNF564Q8TBZ8 553 aaPredicted RBP10.95□□□□□ -0.66
LINC00239-201ENST00000556973 FRS2Q8WU20 508 aa10.95□□□□□ -0.66
LINC00239-201ENST00000556973 BTBD6Q96KE9 485 aa10.95□□□□□ -0.66
LINC00239-201ENST00000556973 PANX2Q96RD6 677 aa10.95□□□□□ -0.66
LINC00239-201ENST00000556973 PSMB7Q99436 277 aa10.95□□□□□ -0.66
LINC00239-201ENST00000556973 HINFPQ9BQA5 517 aa10.95□□□□□ -0.66
LINC00239-201ENST00000556973 SPON2Q9BUD6 331 aa10.95□□□□□ -0.66
LINC00239-201ENST00000556973 SNRNP25Q9BV90 132 aaKnown RBP10.95□□□□□ -0.66
LINC00239-201ENST00000556973 ACE2Q9BYF1 805 aaPredicted RBP10.95□□□□□ -0.66
LINC00239-201ENST00000556973 RSPH9Q9H1X1 276 aaPredicted RBP10.95□□□□□ -0.66
LINC00239-201ENST00000556973 MAGEH1Q9H213 219 aa10.95□□□□□ -0.66
LINC00239-201ENST00000556973 DHX35Q9H5Z1 703 aaKnown RBP10.95□□□□□ -0.66
LINC00239-201ENST00000556973 SPTLC3Q9NUV7 552 aa10.95□□□□□ -0.66
LINC00239-201ENST00000556973 NDFIP2Q9NV92 336 aa10.95□□□□□ -0.66
LINC00239-201ENST00000556973 USP36Q9P275 1121 aaKnown RBP10.95□□□□□ -0.66
LINC00239-201ENST00000556973 CTTNBP2NLQ9P2B4 639 aa10.95□□□□□ -0.66
LINC00239-201ENST00000556973 DNAI1Q9UI46 699 aa10.95□□□□□ -0.66
LINC00239-201ENST00000556973 VPS51Q9UID3 782 aa10.95□□□□□ -0.66
LINC00239-201ENST00000556973 INTUQ9ULD6 942 aa10.95□□□□□ -0.66
LINC00239-201ENST00000556973 HPCAL4Q9UM19 191 aa10.95□□□□□ -0.66
LINC00239-201ENST00000556973 SCML1Q9UN30 329 aa10.95□□□□□ -0.66
LINC00239-201ENST00000556973 NEU3Q9UQ49 428 aa10.95□□□□□ -0.66
LINC00239-201ENST00000556973 HS3ST2Q9Y278 367 aa10.95□□□□□ -0.66
LINC00239-201ENST00000556973 IGHV1OR15-9A0A0B4J2B8 117 aa10.94□□□□□ -0.66
LINC00239-201ENST00000556973 CBX4O00257 560 aa10.94□□□□□ -0.66
LINC00239-201ENST00000556973 RAMP2O60895 175 aa10.94□□□□□ -0.66
LINC00239-201ENST00000556973 LRP3O75074 770 aa10.94□□□□□ -0.66
LINC00239-201ENST00000556973 SIN3BO75182 1162 aa10.94□□□□□ -0.66
LINC00239-201ENST00000556973 LCA5LO95447 670 aa10.94□□□□□ -0.66
LINC00239-201ENST00000556973 IGLV3-19P01714 112 aa10.94□□□□□ -0.66
LINC00239-201ENST00000556973 DNTTP04053 509 aa10.94□□□□□ -0.66
LINC00239-201ENST00000556973 TPMTP51580 245 aa10.94□□□□□ -0.66
LINC00239-201ENST00000556973 CLCN6P51797 869 aa10.94□□□□□ -0.66
LINC00239-201ENST00000556973 YBEYP58557 167 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms