RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 PCK1P35558 622 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 ARL2P36404 184 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 MSH2P43246 934 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 ARSEP51690 589 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 STAT5BP51692 787 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 LINC00310P59036 64 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 NOP14P78316 857 aaKnown RBP6.33□□□□□ -1.4
CPSF2-205ENST00000556622 NKX3-2P78367 333 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 ELF3P78545 371 aaPredicted RBP6.33□□□□□ -1.4
CPSF2-205ENST00000556622 IFI35P80217 286 aaPredicted RBP6.33□□□□□ -1.4
CPSF2-205ENST00000556622 CHRNEQ04844 493 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 DUSP4Q13115 394 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 DNAJC3Q13217 504 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 ITGA7Q13683 1181 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 SNX17Q15036 470 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 PDK2Q15119 407 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 SIX1Q15475 284 aaPredicted RBP6.33□□□□□ -1.4
CPSF2-205ENST00000556622 PDK4Q16654 411 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 KYNUQ16719 465 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 LONRF1Q17RB8 773 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 P3H1Q32P28 736 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 BOLA3Q53S33 107 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 SLC45A4Q5BKX6 768 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 WASHC2DQ5SRD0 308 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 ATG16L1Q676U5 607 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 CCDC62Q6P9F0 684 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 PLPPR4Q7Z2D5 763 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 BRSK2Q8IWQ3 736 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 LMNTD2Q8IXW0 634 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 HACE1Q8IYU2 909 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 OLIG1Q8TAK6 271 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 ZNF606Q8WXB4 792 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 CPA5Q8WXQ8 436 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 KLHL6Q8WZ60 621 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 SEMA4DQ92854 862 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 ATP2A3Q93084 1043 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 MTG1Q9BT17 334 aaPredicted RBP6.33□□□□□ -1.4
CPSF2-205ENST00000556622 NFKBIZQ9BYH8 718 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 IRF2BPLQ9H1B7 796 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 RABEP2Q9H5N1 569 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 ASB7Q9H672 318 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 DHX33Q9H6R0 707 aaKnown RBP6.33□□□□□ -1.4
CPSF2-205ENST00000556622 ECT2Q9H8V3 914 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 VPS37BQ9H9H4 285 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 ARHGEF3Q9NR81 526 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 GFOD1Q9NXC2 390 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 NINJ2Q9NZG7 142 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 ANKFY1Q9P2R3 1169 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 BAIAP2L1Q9UHR4 511 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 FBXL21Q9UKT6 434 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 TCFL5Q9UL49 500 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 SORCS3Q9UPU3 1222 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 NR2E1Q9Y466 385 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 ZNF451Q9Y4E5 1061 aa6.33□□□□□ -1.4
CPSF2-205ENST00000556622 IGKV6D-21A0A0A0MT36 114 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 NOTOA8MTQ0 251 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 I3L4J1 428 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 NOP56O00567 594 aaKnown RBP6.32□□□□□ -1.4
CPSF2-205ENST00000556622 TRAFD1O14545 582 aaPredicted RBP6.32□□□□□ -1.4
CPSF2-205ENST00000556622 B4GALT4O60513 344 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 KRT38O76015 456 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 ARIH2O95376 493 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 CCNE2O96020 404 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 IL1BP01584 269 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 CLTBP09497 229 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 SETSIPP0DME0 302 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 NEFHP12036 1026 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 ALADP13716 330 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 VAV1P15498 845 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 ATF7P17544 494 aaPredicted RBP6.32□□□□□ -1.4
CPSF2-205ENST00000556622 KLRC2P26717 231 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 MAGEA10P43363 369 aaPredicted RBP6.32□□□□□ -1.4
CPSF2-205ENST00000556622 KIR2DL1P43626 348 aaPredicted RBP6.32□□□□□ -1.4
CPSF2-205ENST00000556622 KIR2DL2P43627 348 aaPredicted RBP6.32□□□□□ -1.4
CPSF2-205ENST00000556622 SLCO1A2P46721 670 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 KCNJ1P48048 391 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 IFNAR2P48551 515 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 SERPINB9P50453 376 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 CDK7P50613 346 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 CCNG1P51959 295 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 MYL6P60660 151 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 IRX4P78413 519 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 SP2Q02086 613 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 ILF2Q12905 390 aaKnown RBP6.32□□□□□ -1.4
CPSF2-205ENST00000556622 MYO1EQ12965 1108 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 GPS1Q13098 491 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 SNX1Q13596 522 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 DGKDQ16760 1214 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 PTPROQ16827 1216 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 GALNTL6Q49A17 601 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 CCDC14Q49A88 953 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 MTERF2Q49AM1 385 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 ZNF667Q5HYK9 610 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 HABP4Q5JVS0 413 aaKnown RBP6.32□□□□□ -1.4
CPSF2-205ENST00000556622 CELF3Q5SZQ8 465 aaKnown RBP6.32□□□□□ -1.4
CPSF2-205ENST00000556622 ANKRD20A3Q5VUR7 823 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 METTL7BQ6UX53 244 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 BBS12Q6ZW61 710 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 GGNQ86UU5 652 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 TRABD2AQ86V40 505 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms