RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 TCRBV7S3A2A0A539 114 aa5.03□□□□□ -1.6
SCFD1-221ENST00000556534 C17orf100A8MU93 164 aa5.03□□□□□ -1.6
SCFD1-221ENST00000556534 TPD52L2O43399 206 aaKnown RBP5.03□□□□□ -1.6
SCFD1-221ENST00000556534 EPN2O95208 641 aa5.03□□□□□ -1.6
SCFD1-221ENST00000556534 CIITAP33076 1130 aa5.03□□□□□ -1.6
SCFD1-221ENST00000556534 OAZ1P54368 228 aa5.03□□□□□ -1.6
SCFD1-221ENST00000556534 DHX8Q14562 1220 aaKnown RBP5.03□□□□□ -1.6
SCFD1-221ENST00000556534 TTC39AQ5SRH9 613 aa5.03□□□□□ -1.6
SCFD1-221ENST00000556534 KDELC2Q7Z4H8 507 aa5.03□□□□□ -1.6
SCFD1-221ENST00000556534 GALNT7Q86SF2 657 aa5.03□□□□□ -1.6
SCFD1-221ENST00000556534 MMP21Q8N119 569 aa5.03□□□□□ -1.6
SCFD1-221ENST00000556534 LINS1Q8NG48 757 aa5.03□□□□□ -1.6
SCFD1-221ENST00000556534 VCPIP1Q96JH7 1222 aa5.03□□□□□ -1.6
SCFD1-221ENST00000556534 TRIM31Q9BZY9 425 aa5.03□□□□□ -1.6
SCFD1-221ENST00000556534 FOXP1Q9H334 677 aaPredicted RBP5.03□□□□□ -1.6
SCFD1-221ENST00000556534 ZNF304Q9HCX3 659 aa5.03□□□□□ -1.6
SCFD1-221ENST00000556534 COG5Q9UP83 839 aa5.03□□□□□ -1.6
SCFD1-221ENST00000556534 DERAQ9Y315 318 aa5.03□□□□□ -1.6
SCFD1-221ENST00000556534 STX16-NPEPL1H3BU86 382 aa5.02□□□□□ -1.61
SCFD1-221ENST00000556534 STX16O14662 325 aa5.02□□□□□ -1.61
SCFD1-221ENST00000556534 SEPT4O43236 478 aa5.02□□□□□ -1.61
SCFD1-221ENST00000556534 TMEM191BP0C7N4 346 aa5.02□□□□□ -1.61
SCFD1-221ENST00000556534 ARSAP15289 507 aa5.02□□□□□ -1.61
SCFD1-221ENST00000556534 ME1P48163 572 aa5.02□□□□□ -1.61
SCFD1-221ENST00000556534 PLCD1P51178 756 aa5.02□□□□□ -1.61
SCFD1-221ENST00000556534 PMPCAQ10713 525 aa5.02□□□□□ -1.61
SCFD1-221ENST00000556534 FBXO47Q5MNV8 452 aa5.02□□□□□ -1.61
SCFD1-221ENST00000556534 VWA5B1Q5TIE3 1220 aa5.02□□□□□ -1.61
SCFD1-221ENST00000556534 IRF2BP2Q7Z5L9 587 aa5.02□□□□□ -1.61
SCFD1-221ENST00000556534 C2CD5Q86YS7 1000 aa5.02□□□□□ -1.61
SCFD1-221ENST00000556534 CEP70Q8NHQ1 597 aa5.02□□□□□ -1.61
SCFD1-221ENST00000556534 MORC4Q8TE76 937 aa5.02□□□□□ -1.61
SCFD1-221ENST00000556534 HMCESQ96FZ2 354 aa5.02□□□□□ -1.61
SCFD1-221ENST00000556534 THAP1Q9NVV9 213 aa5.02□□□□□ -1.61
SCFD1-221ENST00000556534 UPB1Q9UBR1 384 aa5.02□□□□□ -1.61
SCFD1-221ENST00000556534 DNAJC16Q9Y2G8 782 aa5.02□□□□□ -1.61
SCFD1-221ENST00000556534 SYN3O14994 580 aa5.01□□□□□ -1.61
SCFD1-221ENST00000556534 TULP3O75386 442 aa5.01□□□□□ -1.61
SCFD1-221ENST00000556534 NDUFB8O95169 186 aa5.01□□□□□ -1.61
SCFD1-221ENST00000556534 TOMM40O96008 361 aa5.01□□□□□ -1.61
SCFD1-221ENST00000556534 LCKP06239 509 aa5.01□□□□□ -1.61
SCFD1-221ENST00000556534 CHRNB1P11230 501 aa5.01□□□□□ -1.61
SCFD1-221ENST00000556534 PSG1P11464 419 aa5.01□□□□□ -1.61
SCFD1-221ENST00000556534 CYP4B1P13584 511 aa5.01□□□□□ -1.61
SCFD1-221ENST00000556534 RXRAP19793 462 aa5.01□□□□□ -1.61
SCFD1-221ENST00000556534 CHRNA5P30532 468 aa5.01□□□□□ -1.61
SCFD1-221ENST00000556534 EFR3AQ14156 821 aa5.01□□□□□ -1.61
SCFD1-221ENST00000556534 TWIST1Q15672 202 aa5.01□□□□□ -1.61
SCFD1-221ENST00000556534 ODF3L2Q3SX64 289 aa5.01□□□□□ -1.61
SCFD1-221ENST00000556534 ENTPD8Q5MY95 495 aa5.01□□□□□ -1.61
SCFD1-221ENST00000556534 FAM171A1Q5VUB5 890 aa5.01□□□□□ -1.61
SCFD1-221ENST00000556534 LRCH2Q5VUJ6 765 aa5.01□□□□□ -1.61
SCFD1-221ENST00000556534 B4GALNT4Q76KP1 1039 aa5.01□□□□□ -1.61
SCFD1-221ENST00000556534 CCDC25Q86WR0 208 aa5.01□□□□□ -1.61
SCFD1-221ENST00000556534 BRSK2Q8IWQ3 736 aa5.01□□□□□ -1.61
SCFD1-221ENST00000556534 TMEM57Q8N5G2 664 aa5.01□□□□□ -1.61
SCFD1-221ENST00000556534 ACAD9Q9H845 621 aa5.01□□□□□ -1.61
SCFD1-221ENST00000556534 DGKBQ9Y6T7 804 aa5.01□□□□□ -1.61
SCFD1-221ENST00000556534 IGLV5-39A0A0G2JS06 123 aa5□□□□□ -1.61
SCFD1-221ENST00000556534 TMEM272A0A1B0GTI8 110 aa5□□□□□ -1.61
SCFD1-221ENST00000556534 EIF3JO75822 258 aaKnown RBP5□□□□□ -1.61
SCFD1-221ENST00000556534 METTL18O95568 372 aa5□□□□□ -1.61
SCFD1-221ENST00000556534 CNPP09543 421 aaKnown RBP5□□□□□ -1.61
SCFD1-221ENST00000556534 GSTM2P28161 218 aa5□□□□□ -1.61
SCFD1-221ENST00000556534 ALDH7A1P49419 539 aaKnown RBP5□□□□□ -1.61
SCFD1-221ENST00000556534 PAPOLAP51003 745 aaKnown RBP5□□□□□ -1.61
SCFD1-221ENST00000556534 RPS6KA3P51812 740 aa5□□□□□ -1.61
SCFD1-221ENST00000556534 MVDP53602 400 aa5□□□□□ -1.61
SCFD1-221ENST00000556534 GAD2Q05329 585 aa5□□□□□ -1.61
SCFD1-221ENST00000556534 PPFIA1Q13136 1202 aa5□□□□□ -1.61
SCFD1-221ENST00000556534 LEXMQ3ZCV2 418 aa5□□□□□ -1.61
SCFD1-221ENST00000556534 PLK5Q496M5 336 aa5□□□□□ -1.61
SCFD1-221ENST00000556534 CTXN3Q4LDR2 81 aa5□□□□□ -1.61
SCFD1-221ENST00000556534 RUNDC3AQ59EK9 446 aa5□□□□□ -1.61
SCFD1-221ENST00000556534 ALG10Q5BKT4 473 aa5□□□□□ -1.61
SCFD1-221ENST00000556534 ALG10BQ5I7T1 473 aa5□□□□□ -1.61
SCFD1-221ENST00000556534 NUGGCQ68CJ6 796 aa5□□□□□ -1.61
SCFD1-221ENST00000556534 GPSM1Q86YR5 675 aa5□□□□□ -1.61
SCFD1-221ENST00000556534 ZNF419Q96HQ0 510 aaPredicted RBP5□□□□□ -1.61
SCFD1-221ENST00000556534 FRG2BQ96QU4 278 aa5□□□□□ -1.61
SCFD1-221ENST00000556534 TWNKQ96RR1 684 aa5□□□□□ -1.61
SCFD1-221ENST00000556534 PYM1Q9BRP8 204 aaKnown RBP5□□□□□ -1.61
SCFD1-221ENST00000556534 ACTR5Q9H9F9 607 aaPredicted RBP5□□□□□ -1.61
SCFD1-221ENST00000556534 MAP6D1Q9H9H5 199 aa5□□□□□ -1.61
SCFD1-221ENST00000556534 TLR8Q9NR97 1041 aaKnown RBP5□□□□□ -1.61
SCFD1-221ENST00000556534 DECR2Q9NUI1 292 aa5□□□□□ -1.61
SCFD1-221ENST00000556534 RRP7AQ9Y3A4 280 aaKnown RBP5□□□□□ -1.61
SCFD1-221ENST00000556534 TRBV5-7A0A0A0MS05 114 aa4.99□□□□□ -1.61
SCFD1-221ENST00000556534 SAC3D1A6NKF1 404 aa4.99□□□□□ -1.61
SCFD1-221ENST00000556534 MDM4O15151 490 aa4.99□□□□□ -1.61
SCFD1-221ENST00000556534 CCNT1O60563 726 aaKnown RBP4.99□□□□□ -1.61
SCFD1-221ENST00000556534 IGKV2-30P06310 120 aa4.99□□□□□ -1.61
SCFD1-221ENST00000556534 CYP2J2P51589 502 aa4.99□□□□□ -1.61
SCFD1-221ENST00000556534 PKP1Q13835 747 aa4.99□□□□□ -1.61
SCFD1-221ENST00000556534 C5orf22Q49AR2 442 aa4.99□□□□□ -1.61
SCFD1-221ENST00000556534 ANKRD45Q5TZF3 282 aa4.99□□□□□ -1.61
SCFD1-221ENST00000556534 HMBOX1Q6NT76 420 aa4.99□□□□□ -1.61
SCFD1-221ENST00000556534 SLC25A41Q8N5S1 370 aa4.99□□□□□ -1.61
SCFD1-221ENST00000556534 Q8N9P0 234 aaPredicted RBP4.99□□□□□ -1.61
SCFD1-221ENST00000556534 GCC1Q96CN9 775 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms