RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 IPO11Q9UI26 975 aaKnown RBP11.09□□□□□ -0.63
LINC01550-206ENST00000556462 NFS1Q9Y697 457 aa11.09□□□□□ -0.63
LINC01550-206ENST00000556462 REV3LO60673 3130 aa11.09□□□□□ -0.63
LINC01550-206ENST00000556462 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.08□□□□□ -0.63
LINC01550-206ENST00000556462 MATN3O15232 486 aa11.08□□□□□ -0.63
LINC01550-206ENST00000556462 ZBTB24O43167 697 aaPredicted RBP11.08□□□□□ -0.63
LINC01550-206ENST00000556462 TSPAN3O60637 253 aa11.08□□□□□ -0.63
LINC01550-206ENST00000556462 PEX11BO96011 259 aa11.08□□□□□ -0.63
LINC01550-206ENST00000556462 JCHAINP01591 159 aa11.08□□□□□ -0.63
LINC01550-206ENST00000556462 APRTP07741 180 aa11.08□□□□□ -0.63
LINC01550-206ENST00000556462 CCNB1P14635 433 aa11.08□□□□□ -0.63
LINC01550-206ENST00000556462 DDX6P26196 483 aaKnown RBP eCLIP11.08□□□□□ -0.63
LINC01550-206ENST00000556462 CDH4P55283 916 aa11.08□□□□□ -0.63
LINC01550-206ENST00000556462 PARP6Q2NL67 630 aa11.08□□□□□ -0.63
LINC01550-206ENST00000556462 RABGAP1LQ5R372 815 aa11.08□□□□□ -0.63
LINC01550-206ENST00000556462 FNBP1LQ5T0N5 605 aa11.08□□□□□ -0.63
LINC01550-206ENST00000556462 CFAP58Q5T655 872 aa11.08□□□□□ -0.63
LINC01550-206ENST00000556462 FAM217AQ8IXS0 508 aa11.08□□□□□ -0.63
LINC01550-206ENST00000556462 C12orf76Q8N812 135 aaPredicted RBP11.08□□□□□ -0.63
LINC01550-206ENST00000556462 UBLCP1Q8WVY7 318 aaPredicted RBP11.08□□□□□ -0.63
LINC01550-206ENST00000556462 TEKT5Q96M29 485 aa11.08□□□□□ -0.63
LINC01550-206ENST00000556462 ZIM3Q96PE6 472 aa11.08□□□□□ -0.63
LINC01550-206ENST00000556462 VAT1Q99536 393 aa11.08□□□□□ -0.63
LINC01550-206ENST00000556462 GORASP1Q9BQQ3 440 aa11.08□□□□□ -0.63
LINC01550-206ENST00000556462 SMG9Q9H0W8 520 aaKnown RBP11.08□□□□□ -0.63
LINC01550-206ENST00000556462 CDC42EP4Q9H3Q1 356 aaKnown RBP11.08□□□□□ -0.63
LINC01550-206ENST00000556462 TASP1Q9H6P5 420 aa11.08□□□□□ -0.63
LINC01550-206ENST00000556462 ARHGAP26Q9UNA1 814 aa11.08□□□□□ -0.63
LINC01550-206ENST00000556462 CCL26Q9Y258 94 aa11.08□□□□□ -0.63
LINC01550-206ENST00000556462 MYO18AQ92614 2054 aaKnown RBP11.08□□□□□ -0.64
LINC01550-206ENST00000556462 LEFTY2O00292 366 aa11.08□□□□□ -0.64
LINC01550-206ENST00000556462 ALOX15BO15296 676 aa11.08□□□□□ -0.64
LINC01550-206ENST00000556462 RIPK2O43353 540 aa11.08□□□□□ -0.64
LINC01550-206ENST00000556462 RAMP2O60895 175 aa11.08□□□□□ -0.64
LINC01550-206ENST00000556462 CLDN11O75508 207 aa11.08□□□□□ -0.64
LINC01550-206ENST00000556462 PSMB4P28070 264 aa11.08□□□□□ -0.64
LINC01550-206ENST00000556462 FDFT1P37268 417 aa11.08□□□□□ -0.64
LINC01550-206ENST00000556462 YBEYP58557 167 aaPredicted RBP11.08□□□□□ -0.64
LINC01550-206ENST00000556462 IFI35P80217 286 aaPredicted RBP11.08□□□□□ -0.64
LINC01550-206ENST00000556462 CBLBQ13191 982 aa11.08□□□□□ -0.64
LINC01550-206ENST00000556462 SLC29A2Q14542 456 aa11.08□□□□□ -0.64
LINC01550-206ENST00000556462 POLD3Q15054 466 aaPredicted RBP11.08□□□□□ -0.64
LINC01550-206ENST00000556462 MSS51Q4VC12 460 aa11.08□□□□□ -0.64
LINC01550-206ENST00000556462 RIN3Q8TB24 985 aa11.08□□□□□ -0.64
LINC01550-206ENST00000556462 MAML1Q92585 1016 aa11.08□□□□□ -0.64
LINC01550-206ENST00000556462 EXOC4Q96A65 974 aa11.08□□□□□ -0.64
LINC01550-206ENST00000556462 TIFAQ96CG3 184 aa11.08□□□□□ -0.64
LINC01550-206ENST00000556462 MRPL38Q96DV4 380 aaKnown RBP11.08□□□□□ -0.64
LINC01550-206ENST00000556462 AGAP3Q96P47 875 aa11.08□□□□□ -0.64
LINC01550-206ENST00000556462 IL12RB2Q99665 862 aa11.08□□□□□ -0.64
LINC01550-206ENST00000556462 DDX50Q9BQ39 737 aaKnown RBP11.08□□□□□ -0.64
LINC01550-206ENST00000556462 CFAP97Q9P2B7 532 aa11.08□□□□□ -0.64
LINC01550-206ENST00000556462 KLHL8Q9P2G9 620 aaPredicted RBP11.08□□□□□ -0.64
LINC01550-206ENST00000556462 TRHDEQ9UKU6 1024 aa11.08□□□□□ -0.64
LINC01550-206ENST00000556462 PLAAQ9Y263 795 aa11.08□□□□□ -0.64
LINC01550-206ENST00000556462 ATG2AQ2TAZ0 1938 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 A0A0D9SEW6 157 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 A0A1B0GVM2 712 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 GOLGA6BA6NDN3 693 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 TCAF2A6NFQ2 919 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 ARHGAP42A6NI28 874 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 SOBPA7XYQ1 873 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 E7ESA3 106 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 F5H423 210 aaPredicted RBP11.07□□□□□ -0.64
LINC01550-206ENST00000556462 J3KR12 359 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 CACNG3O60359 315 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 TTC4O95801 387 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 ACVRL1P37023 503 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 MAGEA4P43358 317 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 SERINC3Q13530 473 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 FASTKD3Q14CZ7 662 aaKnown RBP11.07□□□□□ -0.64
LINC01550-206ENST00000556462 HIF1AQ16665 826 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 KYNUQ16719 465 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 PARP15Q460N3 678 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 TMC5Q6UXY8 1006 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 TRMT10CQ7L0Y3 403 aaKnown RBP11.07□□□□□ -0.64
LINC01550-206ENST00000556462 CHST9Q7L1S5 443 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 CAND1Q86VP6 1230 aaKnown RBP11.07□□□□□ -0.64
LINC01550-206ENST00000556462 BBS7Q8IWZ6 715 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 ARHGEF2Q92974 986 aaKnown RBP11.07□□□□□ -0.64
LINC01550-206ENST00000556462 USP13Q92995 863 aaPredicted RBP11.07□□□□□ -0.64
LINC01550-206ENST00000556462 FATE1Q969F0 183 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 ZSWIM3Q96MP5 696 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 PHACTR1Q9C0D0 580 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 LSM7Q9UK45 103 aaKnown RBP11.07□□□□□ -0.64
LINC01550-206ENST00000556462 TBC1D30Q9Y2I9 924 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 XIRP2A4UGR9 3374 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 SPDYE4A6NLX3 237 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 BANF1O75531 89 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 SYF2O95926 243 aaKnown RBP11.07□□□□□ -0.64
LINC01550-206ENST00000556462 TPSB2P20231 275 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 AVPR1AP37288 418 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 ARL4CP56559 192 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 PDIA2Q13087 525 aaKnown RBP11.07□□□□□ -0.64
LINC01550-206ENST00000556462 MTM1Q13496 603 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 TPSAB1Q15661 275 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 ARHGAP15Q53QZ3 475 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 TIGD7Q6NT04 549 aaPredicted RBP11.07□□□□□ -0.64
LINC01550-206ENST00000556462 ELMSAN1Q6PJG2 1045 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 CENPUQ71F23 418 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms