RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 TMPRSS15P98073 1019 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 ZNF200P98182 395 aaPredicted RBP5.21□□□□□ -1.58
TMEM260-210ENST00000556422 ACY1Q03154 408 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 ZNF268Q14587 947 aaPredicted RBP5.21□□□□□ -1.58
TMEM260-210ENST00000556422 FASTKD3Q14CZ7 662 aaKnown RBP5.21□□□□□ -1.58
TMEM260-210ENST00000556422 KYNUQ16719 465 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 QPCTQ16769 361 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 KYAT1Q16773 422 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 FAM26DQ5JW98 314 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 IZUMO3Q5VZ72 239 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 PMF1Q6P1K2 205 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 SLC27A1Q6PCB7 646 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 FAM183BPQ6ZVS7 135 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 TLK2Q86UE8 772 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 ZNF598Q86UK7 904 aaKnown RBP5.21□□□□□ -1.58
TMEM260-210ENST00000556422 HACE1Q8IYU2 909 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 C7orf61Q8IZ16 206 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 CMASQ8NFW8 434 aaPredicted RBP5.21□□□□□ -1.58
TMEM260-210ENST00000556422 CIB1Q99828 191 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 ADPGKQ9BRR6 497 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 BRINP2Q9C0B6 783 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 EHD1Q9H4M9 534 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 C10orf88Q9H8K7 445 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 TRPC7Q9HCX4 862 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 ZC4H2Q9NQZ6 224 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 CNTN3Q9P232 1028 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 ERVK-19Q9WJR5 959 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 IPPQ9Y573 584 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 MYO18AQ92614 2054 aaKnown RBP5.21□□□□□ -1.58
TMEM260-210ENST00000556422 SMIM35A0A1B0GVV1 85 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 ZSCAN5BA6NJL1 495 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 C2CD4BA6NLJ0 364 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 A8MVJ9 347 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 DNALI1O14645 258 aaPredicted RBP5.21□□□□□ -1.58
TMEM260-210ENST00000556422 TREHO43280 583 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 FAM107AO95990 144 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 ITGAVP06756 1048 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 DARSP14868 501 aaKnown RBP5.21□□□□□ -1.58
TMEM260-210ENST00000556422 CFL1P23528 166 aaKnown RBP5.21□□□□□ -1.58
TMEM260-210ENST00000556422 KDELR1P24390 212 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 PSMA4P25789 261 aaKnown RBP5.21□□□□□ -1.58
TMEM260-210ENST00000556422 HMOX2P30519 316 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 CD86P42081 329 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 CD97P48960 835 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 RBP5P82980 135 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 MAP2K5Q13163 448 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 NDUFA5Q16718 116 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 DCAF4L1Q3SXM0 396 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 ANKRD39Q53RE8 183 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 CLVS2Q5SYC1 327 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 STRA8Q7Z7C7 330 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 EXOC3L1Q86VI1 746 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 ARFGAP2Q8N6H7 521 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 CALML6Q8TD86 181 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 ZNF473Q8WTR7 871 aaKnown RBP5.21□□□□□ -1.58
TMEM260-210ENST00000556422 KBTBD7Q8WVZ9 684 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 HEXIM2Q96MH2 286 aaKnown RBP5.21□□□□□ -1.58
TMEM260-210ENST00000556422 CCT8L2Q96SF2 557 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 DPEP3Q9H4B8 488 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 FAM124BQ9H5Z6 455 aaPredicted RBP5.21□□□□□ -1.58
TMEM260-210ENST00000556422 SLC40A1Q9NP59 571 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 FAM8A1Q9UBU6 413 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 L3MBTL1Q9Y468 752 aa5.21□□□□□ -1.58
TMEM260-210ENST00000556422 FARP1Q9Y4F1 1045 aaPredicted RBP5.21□□□□□ -1.58
TMEM260-210ENST00000556422 GPC6Q9Y625 555 aaPredicted RBP5.21□□□□□ -1.58
TMEM260-210ENST00000556422 SYNJ2BP-COX16A0A087WUM0 186 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 ARHGEF37A1IGU5 675 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 TYW5A2RUC4 315 aaKnown RBP5.2□□□□□ -1.58
TMEM260-210ENST00000556422 TDRD15B5MCY1 1934 aaKnown RBP5.2□□□□□ -1.58
TMEM260-210ENST00000556422 CDK2AP1O14519 115 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 RASGRF2O14827 1237 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 RECQL4O94761 1208 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 KCNH1O95259 989 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 APBB3O95704 486 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 SFTPCP11686 197 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 CYP2C9P11712 490 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 AKAP5P24588 427 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 GCAP28676 217 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 CTGFP29279 349 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 ARSEP51690 589 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 NRLP54845 237 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 CAV1Q03135 178 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 GAD2Q05329 585 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 SOX4Q06945 474 aaPredicted RBP5.2□□□□□ -1.58
TMEM260-210ENST00000556422 SMAD1Q15797 465 aaKnown RBP5.2□□□□□ -1.58
TMEM260-210ENST00000556422 SOWAHAQ2M3V2 549 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 PPP6R3Q5H9R7 873 aaPredicted RBP5.2□□□□□ -1.58
TMEM260-210ENST00000556422 UBXN11Q5T124 520 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 ERMARDQ5T6L9 678 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 FAM102AQ5T9C2 384 aaPredicted RBP5.2□□□□□ -1.58
TMEM260-210ENST00000556422 RNASEH2BQ5TBB1 312 aaKnown RBP5.2□□□□□ -1.58
TMEM260-210ENST00000556422 LVRNQ6Q4G3 990 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 B3GNT6Q6ZMB0 384 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 BBS12Q6ZW61 710 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 IKBIPQ70UQ0 350 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 CYP4X1Q8N118 509 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 ZCCHC9Q8N567 271 aaKnown RBP5.2□□□□□ -1.58
TMEM260-210ENST00000556422 C2orf69Q8N8R5 385 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 OR6C4Q8NGE1 309 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 ACTL9Q8TC94 416 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms